BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00002727
         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244786.1| RNA polymerase sigma factor sigA [Asparagus ...   176   1e-49
gb|ONK58865.1| uncharacterized protein A4U43_C08F530 [Asparagus ...   176   2e-49
ref|XP_008808794.1| PREDICTED: RNA polymerase sigma factor sigA ...   170   2e-47
ref|XP_010910228.1| PREDICTED: RNA polymerase sigma factor sigA ...   159   4e-43
ref|XP_009397520.1| PREDICTED: RNA polymerase sigma factor sigA ...   157   2e-42
ref|XP_020114873.1| RNA polymerase sigma factor sigA isoform X3 ...   149   1e-39
ref|XP_020114872.1| RNA polymerase sigma factor sigA isoform X2 ...   149   1e-39
ref|XP_020114871.1| RNA polymerase sigma factor sigA isoform X1 ...   149   2e-39
gb|OAY70832.1| RNA polymerase sigma factor sigA [Ananas comosus]      149   2e-39
ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-...   146   2e-38
gb|OVA18378.1| RNA polymerase sigma-70 [Macleaya cordata]             142   8e-37
ref|XP_009382828.1| PREDICTED: RNA polymerase sigma factor sigA-...   139   7e-36
ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-...   139   1e-35
gb|PKA46184.1| RNA polymerase sigma factor sigA [Apostasia shenz...   137   6e-35
ref|XP_020685448.1| RNA polymerase sigma factor sigA isoform X3 ...   134   4e-34
ref|XP_020685447.1| RNA polymerase sigma factor sigA isoform X2 ...   134   4e-34
ref|XP_020685443.1| RNA polymerase sigma factor sigA isoform X1 ...   134   4e-34
gb|PNS90429.1| hypothetical protein POPTR_019G043300v3 [Populus ...   128   3e-32
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   128   5e-32
gb|PNS90427.1| hypothetical protein POPTR_019G043300v3 [Populus ...   128   6e-32

>ref|XP_020244786.1| RNA polymerase sigma factor sigA [Asparagus officinalis]
 ref|XP_020244787.1| RNA polymerase sigma factor sigA [Asparagus officinalis]
          Length = 501

 Score =  176 bits (445), Expect = 1e-49
 Identities = 96/159 (60%), Positives = 117/159 (73%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGL+AGKRILSS+FYSS+     F  +DHGS QFSA ++KS +I++RRS+H +
Sbjct: 1   MMATAAVIGLNAGKRILSSTFYSSE-----FTFIDHGSPQFSAPTSKS-IIIARRSSHPN 54

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            +VP++RH+V +KAV+EH DTI+P  T   W +                 VFLLLQKSML
Sbjct: 55  TSVPSERHSVSIKAVKEHTDTISPIATDD-WSDLIEEEEDGDSDIKSSLEVFLLLQKSML 113

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQWKLSFNQM T  APGET +K EVIRSGISARKRRT+
Sbjct: 114 EKQWKLSFNQMSTATAPGETCRKTEVIRSGISARKRRTS 152


>gb|ONK58865.1| uncharacterized protein A4U43_C08F530 [Asparagus officinalis]
          Length = 521

 Score =  176 bits (445), Expect = 2e-49
 Identities = 96/159 (60%), Positives = 117/159 (73%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGL+AGKRILSS+FYSS+     F  +DHGS QFSA ++KS +I++RRS+H +
Sbjct: 1   MMATAAVIGLNAGKRILSSTFYSSE-----FTFIDHGSPQFSAPTSKS-IIIARRSSHPN 54

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            +VP++RH+V +KAV+EH DTI+P  T   W +                 VFLLLQKSML
Sbjct: 55  TSVPSERHSVSIKAVKEHTDTISPIATDD-WSDLIEEEEDGDSDIKSSLEVFLLLQKSML 113

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQWKLSFNQM T  APGET +K EVIRSGISARKRRT+
Sbjct: 114 EKQWKLSFNQMSTATAPGETCRKTEVIRSGISARKRRTS 152


>ref|XP_008808794.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808795.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808796.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
 ref|XP_008808797.1| PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
          Length = 508

 Score =  170 bits (431), Expect = 2e-47
 Identities = 90/157 (57%), Positives = 116/157 (73%)
 Frame = +2

Query: 20  MATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSA 199
           MATAAVIGLS GKR+LS+SFY +DLA++LF V DHGS QFS +STK++ I ++RS++F  
Sbjct: 1   MATAAVIGLSTGKRLLSTSFYPADLAEKLFAVPDHGSMQFSTSSTKNT-IAAKRSSNFGT 59

Query: 200 NVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSMLE 379
           N+P++RH+  +KA++EHVDT A  +T+ +WF R                V +LLQKSMLE
Sbjct: 60  NIPSNRHSQAIKALKEHVDT-AALSTADAWFRRPDPLEDGESDLEYSLEVLILLQKSMLE 118

Query: 380 KQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRT 490
           KQWKL F Q++TV  P E+ KK EVIRSGISARKRRT
Sbjct: 119 KQWKLPFEQIKTVDDPRESCKKTEVIRSGISARKRRT 155


>ref|XP_010910228.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910230.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910231.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910232.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910235.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910236.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_010910226.2| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703121.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703122.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
 ref|XP_019703123.1| PREDICTED: RNA polymerase sigma factor sigA [Elaeis guineensis]
          Length = 508

 Score =  159 bits (401), Expect = 4e-43
 Identities = 88/157 (56%), Positives = 113/157 (71%)
 Frame = +2

Query: 20  MATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSA 199
           MA AAV GLS GKR+LS+SFY SDLA++LF V DH S QFS ASTK++ I +++S++FS 
Sbjct: 1   MAMAAVFGLSRGKRLLSTSFYPSDLAEKLFAVPDHASMQFSTASTKNT-IAAKKSSNFST 59

Query: 200 NVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSMLE 379
           N+ ++RH+  +KA++EHVDT A  +T+ +WF+R                V LLLQKSMLE
Sbjct: 60  NIRSNRHSQAIKALKEHVDTSA-LSTADTWFQRPDLLEDGESDLEYSLEVLLLLQKSMLE 118

Query: 380 KQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRT 490
           KQ KL F Q++TV  P E+ KK EVIRSGISARKRRT
Sbjct: 119 KQRKLPFEQIKTVDDPRESCKKTEVIRSGISARKRRT 155


>ref|XP_009397520.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397527.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397536.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
 ref|XP_009397544.1| PREDICTED: RNA polymerase sigma factor sigA [Musa acuminata subsp.
           malaccensis]
          Length = 498

 Score =  157 bits (396), Expect = 2e-42
 Identities = 88/158 (55%), Positives = 109/158 (68%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGL  GKR+LSSSF  +DL ++LF V DHGS  FS  STK + IV+++S+HF 
Sbjct: 1   MMATAAVIGLHTGKRLLSSSFCQTDLTEKLFSVPDHGSLPFSGGSTKCT-IVAKKSSHFG 59

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
           +NVP  RH   +KA+RE V+T AP +TS +W ER                V +LLQKSML
Sbjct: 60  SNVPPTRHIPTIKALRERVNTSAP-STSDTWSER--------PDLESSLEVLILLQKSML 110

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRT 490
           EKQW+L F QM TVVAP  + + PE+ RSGISAR+RRT
Sbjct: 111 EKQWELPFTQMTTVVAPENSCQMPEITRSGISARERRT 148


>ref|XP_020114873.1| RNA polymerase sigma factor sigA isoform X3 [Ananas comosus]
          Length = 466

 Score =  149 bits (375), Expect = 1e-39
 Identities = 79/159 (49%), Positives = 109/159 (68%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS+ I++++S +F 
Sbjct: 1   MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSA-IIAQKSPNFG 59

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            N  ++R    +KA++EH  + A T+T+ +W                   V +LLQKSML
Sbjct: 60  PNASSNRQMRAIKALKEHAHS-AATSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSML 118

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQW+L F+QM+T   P E N K EV RSG+SAR+RRT+
Sbjct: 119 EKQWELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTD 157


>ref|XP_020114872.1| RNA polymerase sigma factor sigA isoform X2 [Ananas comosus]
          Length = 479

 Score =  149 bits (375), Expect = 1e-39
 Identities = 79/159 (49%), Positives = 109/159 (68%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS+ I++++S +F 
Sbjct: 1   MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSA-IIAQKSPNFG 59

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            N  ++R    +KA++EH  + A T+T+ +W                   V +LLQKSML
Sbjct: 60  PNASSNRQMRAIKALKEHAHS-AATSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSML 118

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQW+L F+QM+T   P E N K EV RSG+SAR+RRT+
Sbjct: 119 EKQWELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTD 157


>ref|XP_020114871.1| RNA polymerase sigma factor sigA isoform X1 [Ananas comosus]
          Length = 501

 Score =  149 bits (375), Expect = 2e-39
 Identities = 79/159 (49%), Positives = 109/159 (68%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS+ I++++S +F 
Sbjct: 1   MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSA-IIAQKSPNFG 59

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            N  ++R    +KA++EH  + A T+T+ +W                   V +LLQKSML
Sbjct: 60  PNASSNRQMRAIKALKEHAHS-AATSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSML 118

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQW+L F+QM+T   P E N K EV RSG+SAR+RRT+
Sbjct: 119 EKQWELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTD 157


>gb|OAY70832.1| RNA polymerase sigma factor sigA [Ananas comosus]
          Length = 501

 Score =  149 bits (375), Expect = 2e-39
 Identities = 79/159 (49%), Positives = 109/159 (68%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLSAG R+LS+SFY SDL+++LF V DHG  QFS+A++KS+ I++++S +F 
Sbjct: 1   MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSA-IIAQKSPNFG 59

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            N  ++R    +KA++EH  + A T+T+ +W                   V +LLQKSML
Sbjct: 60  PNASSNRQMRAIKALKEHAHS-AATSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSML 118

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQW+L F+QM+T   P E N K EV RSG+SAR+RRT+
Sbjct: 119 EKQWELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTD 157


>ref|XP_010266387.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  146 bits (369), Expect = 2e-38
 Identities = 78/159 (49%), Positives = 109/159 (68%), Gaps = 1/159 (0%)
 Frame = +2

Query: 20  MATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFSA 199
           MATAAVIGLSAGKR+L+S+FY SD+ DRL  V DHG AQ+ A S K +VI++R+S++F  
Sbjct: 1   MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQATSAK-NVIIARKSSNFGD 59

Query: 200 NVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSMLE 379
           + P+++H   ++A++EHV+T++  +T+  W +                   LLLQK +LE
Sbjct: 60  SFPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLLE 119

Query: 380 KQWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTN 493
           KQW LSF Q  T  APG ET+KK +V RSG+SAR+RRT+
Sbjct: 120 KQWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTS 158


>gb|OVA18378.1| RNA polymerase sigma-70 [Macleaya cordata]
          Length = 506

 Score =  142 bits (357), Expect = 8e-37
 Identities = 80/161 (49%), Positives = 107/161 (66%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMAT AVIGLSAGKR+LSSSFY SD+ D+LF V DHG  Q+  AS K S+I++++S+ F 
Sbjct: 1   MMATTAVIGLSAGKRLLSSSFYYSDVTDKLFSVHDHGLTQYQVASGK-SLIIAKKSSDFG 59

Query: 197 ANVPADRHTVPVKAVREHVDTIA-PTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSM 373
            N P++RHT  + A+ EH+++ + P+T    W  R                  LLLQKSM
Sbjct: 60  PNFPSNRHTQSINALIEHLESSSVPSTADGIW--RSDFLEEEDNDSRSSLEAILLLQKSM 117

Query: 374 LEKQWKLSFNQMRTVVAPGETN-KKPEVIRSGISARKRRTN 493
           LEKQW LSF + +T++ PGE + K  +V RSGISAR+RRT+
Sbjct: 118 LEKQWNLSFERKQTMIVPGEESCKNIQVARSGISARQRRTS 158


>ref|XP_009382828.1| PREDICTED: RNA polymerase sigma factor sigA-like [Musa acuminata
           subsp. malaccensis]
          Length = 491

 Score =  139 bits (350), Expect = 7e-36
 Identities = 76/157 (48%), Positives = 101/157 (64%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMAT+AV+GLS GKR+L+SSF  +DLA++LFP++D  +  F  ASTK SV+V+++ + F 
Sbjct: 1   MMATSAVVGLSTGKRLLTSSFCPTDLAEKLFPILDQTTLPFPTASTK-SVVVAQKPSPFR 59

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            N P  RH   +KA++EHV T+AP+ T                         +LLQKSML
Sbjct: 60  PNAPPTRHVPIIKALKEHVHTLAPSPTD----------------LESSLEALILLQKSML 103

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRR 487
           EKQW+L F QM TV APG   + PE+ RSGISAR+RR
Sbjct: 104 EKQWELPFTQMTTVAAPGNGCRVPEIARSGISARERR 140


>ref|XP_010275189.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
 ref|XP_010275190.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
 ref|XP_010275191.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  139 bits (350), Expect = 1e-35
 Identities = 77/162 (47%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
 Frame = +2

Query: 11  SCMMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTH 190
           S  MATAAVIGL+AGKR+LSS+FY SD+ DRL  V DHG AQ+  A +K SV+++++S++
Sbjct: 8   SSSMATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPSK-SVVIAKKSSN 66

Query: 191 FSANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKS 370
           F  +  ++RH   +KA++EH++T + T+T   W +                   LLLQKS
Sbjct: 67  FDHDFASNRHNQSIKALKEHLNTFS-TSTEDMWLQTSDHLEEGNSDLDYSLEALLLLQKS 125

Query: 371 MLEKQWKLSFNQ-MRTVVAPGETNKKPEVIRSGISARKRRTN 493
           +LEKQW LSF + MR      ET KK +V RSG+SAR+RRTN
Sbjct: 126 LLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTN 167


>gb|PKA46184.1| RNA polymerase sigma factor sigA [Apostasia shenzhenica]
          Length = 503

 Score =  137 bits (344), Expect = 6e-35
 Identities = 77/159 (48%), Positives = 105/159 (66%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMAT  VIGL AGKR+LS+SFY +D AD+  P  DHG  Q S+A+ K+ V+ +++ +HF 
Sbjct: 1   MMATTTVIGLRAGKRLLSTSFYPTDFADKCLP--DHGPVQTSSAANKN-VVYAQKPSHFG 57

Query: 197 ANVPADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSML 376
            +   +RH   VKA+  HVDT AP+TT++ WFE                 V +LLQKSML
Sbjct: 58  MDSSKNRHPQLVKALMAHVDTSAPSTTNN-WFENSNTSKNDNDIESSLE-VLILLQKSML 115

Query: 377 EKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           EKQW+LSF+  RT+ +P + ++K EV RSGISAR+RR +
Sbjct: 116 EKQWELSFDHTRTITSPHKGSRKSEVTRSGISARQRRVD 154


>ref|XP_020685448.1| RNA polymerase sigma factor sigA isoform X3 [Dendrobium catenatum]
          Length = 497

 Score =  134 bits (338), Expect = 4e-34
 Identities = 78/161 (48%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MM  AAV+GL+AGKR+L +SFYSSD AD+ FP  DHG+ Q + AS+KS VI +++ ++F 
Sbjct: 1   MMVMAAVVGLAAGKRLLRNSFYSSDFADKFFP--DHGATQPTTASSKS-VIFAQKPSNFG 57

Query: 197 ANVPADRHTVPVK--AVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKS 370
            +    RHT P+K  A+  H+DT AP+ T +S FER                V +LLQKS
Sbjct: 58  MDSSTYRHTEPIKIKALMTHIDTSAPSATDNS-FERLNTVEDHGSDIESSLEVLILLQKS 116

Query: 371 MLEKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           MLEKQW+LSFN  RTV    + +  P + RSGISA+KRR +
Sbjct: 117 MLEKQWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRAD 157


>ref|XP_020685447.1| RNA polymerase sigma factor sigA isoform X2 [Dendrobium catenatum]
          Length = 501

 Score =  134 bits (338), Expect = 4e-34
 Identities = 78/161 (48%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MM  AAV+GL+AGKR+L +SFYSSD AD+ FP  DHG+ Q + AS+KS VI +++ ++F 
Sbjct: 1   MMVMAAVVGLAAGKRLLRNSFYSSDFADKFFP--DHGATQPTTASSKS-VIFAQKPSNFG 57

Query: 197 ANVPADRHTVPVK--AVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKS 370
            +    RHT P+K  A+  H+DT AP+ T +S FER                V +LLQKS
Sbjct: 58  MDSSTYRHTEPIKIKALMTHIDTSAPSATDNS-FERLNTVEDHGSDIESSLEVLILLQKS 116

Query: 371 MLEKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           MLEKQW+LSFN  RTV    + +  P + RSGISA+KRR +
Sbjct: 117 MLEKQWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRAD 157


>ref|XP_020685443.1| RNA polymerase sigma factor sigA isoform X1 [Dendrobium catenatum]
 ref|XP_020685444.1| RNA polymerase sigma factor sigA isoform X1 [Dendrobium catenatum]
 ref|XP_020685445.1| RNA polymerase sigma factor sigA isoform X1 [Dendrobium catenatum]
 gb|PKU75540.1| RNA polymerase sigma factor sigA [Dendrobium catenatum]
          Length = 506

 Score =  134 bits (338), Expect = 4e-34
 Identities = 78/161 (48%), Positives = 104/161 (64%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MM  AAV+GL+AGKR+L +SFYSSD AD+ FP  DHG+ Q + AS+KS VI +++ ++F 
Sbjct: 1   MMVMAAVVGLAAGKRLLRNSFYSSDFADKFFP--DHGATQPTTASSKS-VIFAQKPSNFG 57

Query: 197 ANVPADRHTVPVK--AVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKS 370
            +    RHT P+K  A+  H+DT AP+ T +S FER                V +LLQKS
Sbjct: 58  MDSSTYRHTEPIKIKALMTHIDTSAPSATDNS-FERLNTVEDHGSDIESSLEVLILLQKS 116

Query: 371 MLEKQWKLSFNQMRTVVAPGETNKKPEVIRSGISARKRRTN 493
           MLEKQW+LSFN  RTV    + +  P + RSGISA+KRR +
Sbjct: 117 MLEKQWELSFNLARTVTRTEKNSMTPGITRSGISAQKRRAD 157


>gb|PNS90429.1| hypothetical protein POPTR_019G043300v3 [Populus trichocarpa]
          Length = 431

 Score =  128 bits (322), Expect = 3e-32
 Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLS+GKR+LSSSFY SDL ++L  V DHG   +  A+TK +VIV+++S+++ 
Sbjct: 1   MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTK-NVIVAKKSSNYG 59

Query: 197 ANVP-ADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSM 373
            + P ++R++  +KA++EHVDT + ++  ++WF+                   LLLQKSM
Sbjct: 60  PSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSM 119

Query: 374 LEKQWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTN 493
           LEKQW LSF +  +  +   + NKK  V  SG+SAR+RR N
Sbjct: 120 LEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVN 160


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
 gb|PNS90426.1| hypothetical protein POPTR_019G043300v3 [Populus trichocarpa]
          Length = 451

 Score =  128 bits (322), Expect = 5e-32
 Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLS+GKR+LSSSFY SDL ++L  V DHG   +  A+TK +VIV+++S+++ 
Sbjct: 1   MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTK-NVIVAKKSSNYG 59

Query: 197 ANVP-ADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSM 373
            + P ++R++  +KA++EHVDT + ++  ++WF+                   LLLQKSM
Sbjct: 60  PSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSM 119

Query: 374 LEKQWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTN 493
           LEKQW LSF +  +  +   + NKK  V  SG+SAR+RR N
Sbjct: 120 LEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVN 160


>gb|PNS90427.1| hypothetical protein POPTR_019G043300v3 [Populus trichocarpa]
          Length = 474

 Score =  128 bits (322), Expect = 6e-32
 Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
 Frame = +2

Query: 17  MMATAAVIGLSAGKRILSSSFYSSDLADRLFPVVDHGSAQFSAASTKSSVIVSRRSTHFS 196
           MMATAAVIGLS+GKR+LSSSFY SDL ++L  V DHG   +  A+TK +VIV+++S+++ 
Sbjct: 1   MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTK-NVIVAKKSSNYG 59

Query: 197 ANVP-ADRHTVPVKAVREHVDTIAPTTTSSSWFERXXXXXXXXXXXXXXXXVFLLLQKSM 373
            + P ++R++  +KA++EHVDT + ++  ++WF+                   LLLQKSM
Sbjct: 60  PSFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSM 119

Query: 374 LEKQWKLSFNQMRTVVAPG-ETNKKPEVIRSGISARKRRTN 493
           LEKQW LSF +  +  +   + NKK  V  SG+SAR+RR N
Sbjct: 120 LEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVN 160