BLASTX nr result

ID: Ophiopogon27_contig00002640 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00002640
         (585 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004252106.1| PREDICTED: ABC transporter G family member 9...    42   6e-06

>ref|XP_004252106.1| PREDICTED: ABC transporter G family member 9-like [Solanum
           lycopersicum]
          Length = 1013

 Score = 41.6 bits (96), Expect(2) = 6e-06
 Identities = 25/72 (34%), Positives = 40/72 (55%)
 Frame = -3

Query: 268 LSYKNFHVVLEKYTNSNQIIVSNETRSTSGWILP*ATQFLGVQISKKQILILHSKVEFAS 89
           L Y  F +VLE Y+++      N+++S + WI   A   +  + SKKQ  I HS +E   
Sbjct: 218 LHYSTFPIVLEGYSDATWNSDPNDSKSITVWIFTLAGAAISWK-SKKQTCITHSTMESKF 276

Query: 88  FAMTTIVKEV*W 53
            AM+++ +EV W
Sbjct: 277 IAMSSVREEVDW 288



 Score = 36.2 bits (82), Expect(2) = 6e-06
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -1

Query: 462 LKKNERCMSQLKSSHITGNLMCAIHI-RLDTAFAVGILIKI-NYPDQVHWN 316
           ++ +   + QL  SHI G+LM A+H  R D  + VG L K  + P   HWN
Sbjct: 151 MRNSSDVLDQLTYSHIVGSLMYAMHFTRTDICYTVGTLSKFTSNPRVEHWN 201


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