BLASTX nr result
ID: Ophiopogon27_contig00002559
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00002559
(378 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020264940.1| nuclear poly(A) polymerase 4-like [Asparagus... 85 2e-16
gb|ONK69791.1| uncharacterized protein A4U43_C05F26770 [Asparagu... 85 2e-16
ref|XP_010267123.1| PREDICTED: nuclear poly(A) polymerase 4-like... 60 6e-08
ref|XP_019077778.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 58 3e-07
ref|XP_007024324.2| PREDICTED: nuclear poly(A) polymerase 4 isof... 57 8e-07
gb|EOY26946.1| Nucleic acid binding protein, putative isoform 3 ... 57 8e-07
ref|XP_020681010.1| nuclear poly(A) polymerase 4-like isoform X1... 57 8e-07
ref|XP_008794102.1| PREDICTED: nuclear poly(A) polymerase 4-like... 56 2e-06
gb|EOY09584.1| Uncharacterized protein TCM_024999 [Theobroma cacao] 53 2e-06
ref|XP_011010887.1| PREDICTED: nuclear poly(A) polymerase 4 isof... 55 3e-06
ref|XP_002324162.2| hypothetical protein POPTR_0018s04870g [Popu... 55 3e-06
gb|PNS92848.1| hypothetical protein POPTR_018G057200v3 [Populus ... 55 3e-06
ref|XP_010267125.1| PREDICTED: nuclear poly(A) polymerase 4-like... 55 4e-06
ref|XP_010267122.1| PREDICTED: nuclear poly(A) polymerase 4-like... 55 4e-06
ref|XP_011626769.1| nuclear poly(A) polymerase 4 isoform X2 [Amb... 54 7e-06
ref|XP_023875841.1| nuclear poly(A) polymerase 4-like isoform X3... 54 7e-06
ref|XP_010925521.1| PREDICTED: nuclear poly(A) polymerase 4-like... 54 7e-06
>ref|XP_020264940.1| nuclear poly(A) polymerase 4-like [Asparagus officinalis]
Length = 683
Score = 84.7 bits (208), Expect = 2e-16
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +1
Query: 4 SREGGRTEESVKTNMRKTVLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSES 183
S E G T+E V++ +++ VLEAAL ES +ES LA + +PNAS++GVVL RGGVSSE
Sbjct: 610 SCERGCTDELVQSRIQEKVLEAALAESNHGVESDLAGDFQPNASALGVVLTDRGGVSSEP 669
Query: 184 VQKPVIRLSLTSTA 225
VQKPV+RLSLTSTA
Sbjct: 670 VQKPVMRLSLTSTA 683
>gb|ONK69791.1| uncharacterized protein A4U43_C05F26770 [Asparagus officinalis]
Length = 806
Score = 84.7 bits (208), Expect = 2e-16
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +1
Query: 4 SREGGRTEESVKTNMRKTVLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSES 183
S E G T+E V++ +++ VLEAAL ES +ES LA + +PNAS++GVVL RGGVSSE
Sbjct: 733 SCERGCTDELVQSRIQEKVLEAALAESNHGVESDLAGDFQPNASALGVVLTDRGGVSSEP 792
Query: 184 VQKPVIRLSLTSTA 225
VQKPV+RLSLTSTA
Sbjct: 793 VQKPVMRLSLTSTA 806
>ref|XP_010267123.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Nelumbo
nucifera]
Length = 779
Score = 60.1 bits (144), Expect = 6e-08
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Frame = +1
Query: 13 GGRTEESVKTNMRKT----VLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSE 180
GG + S++ + K+ +LE L + ++ L +ELEPN + +G+VLK R G +SE
Sbjct: 706 GGDNQGSLQVDPCKSNSELLLENGCLNGNGIFQNDLTEELEPNVA-LGMVLKARSGANSE 764
Query: 181 SVQKPVIRLSLTSTA 225
SV KPVIRLSLTSTA
Sbjct: 765 SVSKPVIRLSLTSTA 779
>ref|XP_019077778.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X2 [Vitis vinifera]
Length = 755
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +1
Query: 58 VLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
+LE + ++ + GL +ELEPNA+ +G+VLK RGGV SE V K V+RLSLTSTA
Sbjct: 701 LLENGCVNAKEGFQDGLHEELEPNAA-LGIVLKSRGGVDSEPVPKSVLRLSLTSTA 755
>ref|XP_007024324.2| PREDICTED: nuclear poly(A) polymerase 4 isoform X2 [Theobroma
cacao]
Length = 697
Score = 57.0 bits (136), Expect = 8e-07
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = +1
Query: 52 KTVLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
K+ LE + RV E GL KELEPNA+ +GVVLK SE+VQ VIRL+LTSTA
Sbjct: 641 KSSLEDEHADHNRVFEDGLQKELEPNAA-VGVVLKSMNEADSETVQNTVIRLNLTSTA 697
>gb|EOY26946.1| Nucleic acid binding protein, putative isoform 3 [Theobroma cacao]
Length = 697
Score = 57.0 bits (136), Expect = 8e-07
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = +1
Query: 52 KTVLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
K+ LE + RV E GL KELEPNA+ +GVVLK SE+VQ VIRL+LTSTA
Sbjct: 641 KSSLEDEHADHNRVFEDGLQKELEPNAA-VGVVLKSMNEADSETVQNTVIRLNLTSTA 697
>ref|XP_020681010.1| nuclear poly(A) polymerase 4-like isoform X1 [Dendrobium catenatum]
gb|PKU71272.1| poly(A) polymerase [Dendrobium catenatum]
Length = 722
Score = 57.0 bits (136), Expect = 8e-07
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1
Query: 79 ESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
ESE VL++GL ELE NA+ +G V+K GV++ESVQKPV+RLSLT+TA
Sbjct: 675 ESEPVLQNGLVDELEKNAA-LGAVMKLHEGVNTESVQKPVMRLSLTTTA 722
>ref|XP_008794102.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Phoenix
dactylifera]
Length = 790
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/74 (43%), Positives = 50/74 (67%)
Frame = +1
Query: 4 SREGGRTEESVKTNMRKTVLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSES 183
+ +G + ES++ + LE L + ++++G+A ELE N + +GVVLK RGGV+S++
Sbjct: 720 NNDGNDSLESLQKGI--VPLEKECLNGKGMMQNGMADELEANIT-LGVVLKARGGVNSDA 776
Query: 184 VQKPVIRLSLTSTA 225
QK IRLS+TSTA
Sbjct: 777 AQKSAIRLSVTSTA 790
>gb|EOY09584.1| Uncharacterized protein TCM_024999 [Theobroma cacao]
Length = 98
Score = 52.8 bits (125), Expect = 2e-06
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +1
Query: 22 TEESVKTNMRKTVLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVI 201
+ E + K+ LEA + + E GL KEL NA+ +GVVLK GV SESVQK +I
Sbjct: 32 SNEDIGNEYLKSSLEADHVVHNKDFEDGLQKELVHNAA-VGVVLKSTNGVESESVQKTMI 90
Query: 202 RLSLTSTA 225
RLS STA
Sbjct: 91 RLSSKSTA 98
>ref|XP_011010887.1| PREDICTED: nuclear poly(A) polymerase 4 isoform X1 [Populus
euphratica]
Length = 799
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1
Query: 58 VLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
VLE L RVL+ GL +ELEP ++IG V+ + G SES+QKP+IRLSL STA
Sbjct: 745 VLENGCLNMNRVLQKGLPEELEPK-TAIGKVVNSQDGARSESLQKPMIRLSLKSTA 799
>ref|XP_002324162.2| hypothetical protein POPTR_0018s04870g [Populus trichocarpa]
Length = 835
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1
Query: 58 VLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
VLE+ L RVL GL +ELEP ++IG V+ + G SES+QKP+IRLSL STA
Sbjct: 781 VLESGCLNMSRVLPKGLPEELEPK-TAIGKVVNSQDGARSESLQKPMIRLSLKSTA 835
>gb|PNS92848.1| hypothetical protein POPTR_018G057200v3 [Populus trichocarpa]
Length = 857
Score = 55.5 bits (132), Expect = 3e-06
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +1
Query: 58 VLEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
VLE+ L RVL GL +ELEP ++IG V+ + G SES+QKP+IRLSL STA
Sbjct: 803 VLESGCLNMSRVLPKGLPEELEPK-TAIGKVVNSQDGARSESLQKPMIRLSLKSTA 857
>ref|XP_010267125.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X4 [Nelumbo
nucifera]
ref|XP_010267126.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X4 [Nelumbo
nucifera]
Length = 694
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = +1
Query: 13 GGRTEESVKTNMRKT----VLEAALLESERVLESGLAKELE--PNASSIGVVLKGRGGVS 174
GG + S++ + K+ +LE L + ++ L +ELE PN + +G+VLK R G +
Sbjct: 619 GGDNQGSLQVDPCKSNSELLLENGCLNGNGIFQNDLTEELEVLPNVA-LGMVLKARSGAN 677
Query: 175 SESVQKPVIRLSLTSTA 225
SESV KPVIRLSLTSTA
Sbjct: 678 SESVSKPVIRLSLTSTA 694
>ref|XP_010267122.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Nelumbo
nucifera]
Length = 781
Score = 55.1 bits (131), Expect = 4e-06
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = +1
Query: 13 GGRTEESVKTNMRKT----VLEAALLESERVLESGLAKELE--PNASSIGVVLKGRGGVS 174
GG + S++ + K+ +LE L + ++ L +ELE PN + +G+VLK R G +
Sbjct: 706 GGDNQGSLQVDPCKSNSELLLENGCLNGNGIFQNDLTEELEVLPNVA-LGMVLKARSGAN 764
Query: 175 SESVQKPVIRLSLTSTA 225
SESV KPVIRLSLTSTA
Sbjct: 765 SESVSKPVIRLSLTSTA 781
>ref|XP_011626769.1| nuclear poly(A) polymerase 4 isoform X2 [Amborella trichopoda]
Length = 681
Score = 54.3 bits (129), Expect = 7e-06
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Frame = +1
Query: 13 GGRTEESVKTNMRKTVLEAALLES---ERVLESGLAKELEPNASSIGVVLKGRGGVSSE- 180
GG +E T+ LE A++E+ +SGL +ELEP+ + +G VLK R GV+S+
Sbjct: 612 GGASE----TDSNDPGLEEAMVENLTGAAAFQSGLIEELEPDVA-LGRVLKARSGVNSKA 666
Query: 181 SVQKPVIRLSLTSTA 225
SVQKPVIRLSLTSTA
Sbjct: 667 SVQKPVIRLSLTSTA 681
>ref|XP_023875841.1| nuclear poly(A) polymerase 4-like isoform X3 [Quercus suber]
Length = 773
Score = 54.3 bits (129), Expect = 7e-06
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 61 LEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
LE + VL+ G +ELEPNA+ +G+V+ RG + E+V+KPV+RLSLTSTA
Sbjct: 720 LENGCIYGNGVLQDGYQEELEPNAA-VGMVINSRGEANLEAVEKPVVRLSLTSTA 773
>ref|XP_010925521.1| PREDICTED: nuclear poly(A) polymerase 4-like isoform X2 [Elaeis
guineensis]
Length = 789
Score = 54.3 bits (129), Expect = 7e-06
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = +1
Query: 61 LEAALLESERVLESGLAKELEPNASSIGVVLKGRGGVSSESVQKPVIRLSLTSTA 225
LE L + ++++G+A ELE N + +GVVLK RGGV+S++ QK IRLS+TSTA
Sbjct: 736 LENERLNGKGMMQNGVADELEANIA-LGVVLKARGGVNSDAAQKSAIRLSVTSTA 789