BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00002445
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRW80806.1| hypothetical protein C7A10_32565, partial [Pseudo...    52   3e-06

>gb|PRW80806.1| hypothetical protein C7A10_32565, partial [Pseudomonas fluorescens]
          Length = 81

 Score = 51.6 bits (122), Expect = 3e-06
 Identities = 30/80 (37%), Positives = 39/80 (48%)
 Frame = -1

Query: 252 LFLTIHTVSFILYIITLFLRFPSSIFYSFICTHFVLFFYIFSFCHFHAFISLSFLMVFNP 73
           +FL I    F L+  + F  F S  F  FI + F  FF +FSF  F  FI  SF ++F  
Sbjct: 1   MFLLISAFFFFLFSFSFFFPFFSPFFSFFIPSFFSFFFSLFSFFFFFFFIFFSFYLLFLS 60

Query: 72  FNLIHFSLLIFLQF*SHFFF 13
           F  + F L +F  F    FF
Sbjct: 61  FFFLFFFLFLFFLFSFFSFF 80