BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00001260
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018854550.1| PREDICTED: DNA-directed RNA polymerase II su...   377   e-129
gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna ...   377   e-125
gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlise...   373   e-124
gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus...   377   e-124
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir...   375   e-123
gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar...   380   e-123
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio...   380   e-123
gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimy...   380   e-123
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat...   380   e-123
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno...   380   e-123
gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solan...   374   e-123
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   374   e-123
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic...   379   e-123
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum...   378   e-122
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse...   378   e-122
gb|AAS79685.1| RNA polymerase II large subunit, partial [Taxus c...   377   e-122
gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja o...   377   e-122
gb|AAS79686.1| RNA polymerase II large subunit, partial [Podocar...   377   e-122
gb|AAS79687.1| RNA polymerase II large subunit, partial [Ginkgo ...   377   e-122
gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Ambor...   377   e-122

>ref|XP_018854550.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
           [Juglans regia]
          Length = 387

 Score =  377 bits (969), Expect = e-129
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 93  TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 152

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 153 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 212

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 213 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 272

Query: 543 LLGC 554
           LLGC
Sbjct: 273 LLGC 276


>gb|KOM28113.1| hypothetical protein LR48_Vigan499s005700 [Vigna angularis]
          Length = 725

 Score =  377 bits (967), Expect = e-125
 Identities = 180/184 (97%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 347 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 406

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 407 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 466

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD+
Sbjct: 467 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS 526

Query: 543 LLGC 554
           LLGC
Sbjct: 527 LLGC 530


>gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlisea aurea]
          Length = 652

 Score =  373 bits (957), Expect = e-124
 Identities = 180/184 (97%), Positives = 182/184 (98%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGA+YIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540

Query: 543 LLGC 554
           LLGC
Sbjct: 541 LLGC 544


>gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus suber]
          Length = 836

 Score =  377 bits (969), Expect = e-124
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 359 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 418

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           +DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 419 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 478

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 479 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 538

Query: 543 LLGC 554
           LLGC
Sbjct: 539 LLGC 542


>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
          Length = 780

 Score =  375 bits (964), Expect = e-123
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR
Sbjct: 38  TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 97

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 98  DDGQRLDLRYLKKSSDMHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 157

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 158 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 217

Query: 543 LLGC 554
           LLGC
Sbjct: 218 LLGC 221


>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
          Length = 1009

 Score =  380 bits (977), Expect = e-123
 Identities = 183/184 (99%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 281 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 340

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 341 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 400

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 401 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 460

Query: 543 LLGC 554
           LLGC
Sbjct: 461 LLGC 464


>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron
           tulipifera]
          Length = 1010

 Score =  380 bits (977), Expect = e-123
 Identities = 183/184 (99%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 280 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 339

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 340 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 399

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 400 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 459

Query: 543 LLGC 554
           LLGC
Sbjct: 460 LLGC 463


>gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimys winteri]
          Length = 1010

 Score =  380 bits (977), Expect = e-123
 Identities = 183/184 (99%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 280 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 339

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 340 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 399

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 400 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 459

Query: 543 LLGC 554
           LLGC
Sbjct: 460 LLGC 463


>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
          Length = 1010

 Score =  380 bits (977), Expect = e-123
 Identities = 183/184 (99%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 280 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 339

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 340 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 399

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 400 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 459

Query: 543 LLGC 554
           LLGC
Sbjct: 460 LLGC 463


>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
          Length = 1010

 Score =  380 bits (977), Expect = e-123
 Identities = 183/184 (99%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 280 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 339

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 340 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 399

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 400 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 459

Query: 543 LLGC 554
           LLGC
Sbjct: 460 LLGC 463


>gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solanum lycopersicum]
          Length = 773

 Score =  374 bits (960), Expect = e-123
 Identities = 179/184 (97%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 38  TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 97

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           +DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 98  DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 157

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 158 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 217

Query: 543 LLGC 554
           LLGC
Sbjct: 218 LLGC 221


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  374 bits (961), Expect = e-123
 Identities = 180/184 (97%), Positives = 182/184 (98%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 292 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 351

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 352 EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 411

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 412 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 471

Query: 543 LLGC 554
           LLGC
Sbjct: 472 LLGC 475


>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
          Length = 1013

 Score =  379 bits (974), Expect = e-123
 Identities = 182/184 (98%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 283 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 342

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 343 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 402

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 403 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 462

Query: 543 LLGC 554
           LLGC
Sbjct: 463 LLGC 466


>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
          Length = 1009

 Score =  378 bits (971), Expect = e-122
 Identities = 181/184 (98%), Positives = 184/184 (100%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNI+RLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 279 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIDRLKELVEYGPHPPPGKTGAKYIIR 338

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGD+VLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 339 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDYVLFNRQPSLHKMSIMGHRIKIMPYST 398

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 399 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 458

Query: 543 LLGC 554
           LLGC
Sbjct: 459 LLGC 462


>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
          Length = 1009

 Score =  378 bits (971), Expect = e-122
 Identities = 182/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 279 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 338

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRY KKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 339 EDGQRLDLRYSKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 398

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 399 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 458

Query: 543 LLGC 554
           LLGC
Sbjct: 459 LLGC 462


>gb|AAS79685.1| RNA polymerase II large subunit, partial [Taxus canadensis]
          Length = 1013

 Score =  377 bits (969), Expect = e-122
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 283 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 342

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 343 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 402

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 403 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 462

Query: 543 LLGC 554
           LLGC
Sbjct: 463 LLGC 466


>gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja occidentalis]
          Length = 1013

 Score =  377 bits (969), Expect = e-122
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 283 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 342

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 343 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 402

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 403 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 462

Query: 543 LLGC 554
           LLGC
Sbjct: 463 LLGC 466


>gb|AAS79686.1| RNA polymerase II large subunit, partial [Podocarpus macrophyllus]
          Length = 1013

 Score =  377 bits (969), Expect = e-122
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 283 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 342

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 343 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 402

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 403 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 462

Query: 543 LLGC 554
           LLGC
Sbjct: 463 LLGC 466


>gb|AAS79687.1| RNA polymerase II large subunit, partial [Ginkgo biloba]
          Length = 1013

 Score =  377 bits (969), Expect = e-122
 Identities = 181/184 (98%), Positives = 183/184 (99%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 283 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 342

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 343 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 402

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 403 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 462

Query: 543 LLGC 554
           LLGC
Sbjct: 463 LLGC 466


>gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Amborella trichopoda]
          Length = 1013

 Score =  377 bits (969), Expect = e-122
 Identities = 181/184 (98%), Positives = 182/184 (98%)
 Frame = +3

Query: 3   TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGARYIIR 182
           TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA+YIIR
Sbjct: 283 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 342

Query: 183 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 362
           EDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFV FNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 343 EDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVFFNRQPSLHKMSIMGHRIKIMPYST 402

Query: 363 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 542
           FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 403 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 462

Query: 543 LLGC 554
           LLGC
Sbjct: 463 LLGC 466