BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00001231
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020264961.1| LOW QUALITY PROTEIN: eukaryotic translation ...    77   9e-14
ref|XP_020251967.1| LOW QUALITY PROTEIN: eukaryotic translation ...    64   4e-09
gb|AFR45303.1| putative eukaryotic translation initiation factor...    55   5e-06

>ref|XP_020264961.1| LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3
           subunit D-like, partial [Asparagus officinalis]
          Length = 520

 Score = 77.0 bits (188), Expect = 9e-14
 Identities = 50/90 (55%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 FRLVDXXXXXXXXXXXXXXFQSRPQLPQXXXXXXXXXXXXXXXXXXXXXRLYHQHHRSNQ 87
           FRLVD              FQ+RPQLPQ                      LYH HHRSNQ
Sbjct: 89  FRLVDGKPPPRPKFGPRWRFQNRPQLPQRRDEEVEAKKREAEKEXXXXR-LYHMHHRSNQ 147

Query: 86  NNPHSNAHHHNRRDAP--KSSVDIQPEWTM 3
           NNP++NA HHNRRD+P  KSSVDIQPEWTM
Sbjct: 148 NNPNANA-HHNRRDSPTMKSSVDIQPEWTM 176


>ref|XP_020251967.1| LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3
           subunit D-like [Asparagus officinalis]
          Length = 427

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%), Gaps = 2/36 (5%)
 Frame = -3

Query: 104 HHRSNQNNPHSNAHHHNRRDAP--KSSVDIQPEWTM 3
           HHRSNQNNP++NA HHNRRD+P  KSSVDIQPEWTM
Sbjct: 2   HHRSNQNNPNANA-HHNRRDSPTMKSSVDIQPEWTM 36


>gb|AFR45303.1| putative eukaryotic translation initiation factor 3 (eIF-3),
           partial [Musa acuminata AAA Group]
          Length = 486

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 37/89 (41%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = -3

Query: 266 FRLVDXXXXXXXXXXXXXXFQSRPQLPQXXXXXXXXXXXXXXXXXXXXXRLYHQHHRSNQ 87
           FRLVD              FQ RPQLPQ                     RLYH HHRS  
Sbjct: 81  FRLVDGKPPPRPKFGPRWRFQQRPQLPQRRDEEVEARKREAEKERARRDRLYHLHHRSYA 140

Query: 86  N-NPHSNAHHHNRRDAPKSSVDIQPEWTM 3
           +   H  A  H    A KSSVDIQPEWTM
Sbjct: 141 SAGGHGAAGSHRDAPARKSSVDIQPEWTM 169