BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00001144
         (2289 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258675.1| protein RNA-directed DNA methylation 3, part...   874   0.0  
gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagu...   866   0.0  
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...   712   0.0  
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...   712   0.0  
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...   711   0.0  
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...   711   0.0  
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...   688   0.0  
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...   655   0.0  
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...   654   0.0  
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...   654   0.0  
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...   654   0.0  
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...   647   0.0  
ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dend...   615   0.0  
ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   610   0.0  
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   610   0.0  
gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria ital...   575   0.0  
ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phal...   605   0.0  
gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]      563   0.0  
gb|AQK94721.1| Protein RNA-directed DNA methylation 3 [Zea mays]      572   0.0  
gb|PAN18741.1| hypothetical protein PAHAL_C02415 [Panicum hallii]     586   0.0  

>ref|XP_020258675.1| protein RNA-directed DNA methylation 3, partial [Asparagus
            officinalis]
          Length = 1734

 Score =  874 bits (2259), Expect = 0.0
 Identities = 461/652 (70%), Positives = 507/652 (77%), Gaps = 2/652 (0%)
 Frame = -3

Query: 2092 RKRRAGVLQFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGK 1913
            RKRR+GVLQFF                                     +   K+F+ AGK
Sbjct: 2    RKRRSGVLQFFDDAAEDDGYEEDEENEGQDDLVYDDKDLNLDI----NKESSKDFKGAGK 57

Query: 1912 PQYLPFLVKXXXXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRV 1733
              YLP  VK           LIKDRYG+GSEY VYDEDPK+ +  VSVE  A DP IW+V
Sbjct: 58   SPYLPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQDNAAVSVEHLAGDPNIWKV 117

Query: 1732 KCMAGREQQMVLSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGF 1553
            KCM G+EQQ+VLSLMHKYADLQRLGTKM+IISAFTLEHVKGYVYIEADKACD+VEACKGF
Sbjct: 118  KCMVGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEADKACDVVEACKGF 177

Query: 1552 FNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRAT 1373
            FNIY+TRMGLVP+ +IPHLLS RNK C +SKGTWVRMK+GNYKGDLGQVVDYD+ RK+AT
Sbjct: 178  FNIYSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQVVDYDDMRKKAT 237

Query: 1372 IKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEIL 1193
            IKLVPRIDLQAIAKK+GGGVSLKEAAVP+PRLISS ELE FRSHIEIRRDRHSGE FEIL
Sbjct: 238  IKLVPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIRRDRHSGECFEIL 297

Query: 1192 DGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKS 1013
            DGLMLKDG+LYKKVS+ASIV+WGV+PSKDELLKFTEM+K +EEDVSWLS+VYNVRKK+K 
Sbjct: 298  DGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWLSSVYNVRKKIKP 357

Query: 1012 SEAADAKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXXXXKEGQEVMTIKSED 836
            S+ +D KG+SE GN F LHDLVLFGRK FGV                KEGQEV+T+K+E 
Sbjct: 358  SKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDKEGQEVITVKAEA 417

Query: 835  IKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSG 656
            IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYKGTLFIYDE+QE NSG
Sbjct: 418  IKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTLFIYDESQEGNSG 477

Query: 655  IFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPF 476
            IFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQEDSS TFSRNR  ESNQ F
Sbjct: 478  IFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSSCTFSRNRRRESNQIF 535

Query: 475  SIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMP 296
            S+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ LS PN+KRD A    
Sbjct: 536  SVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSDPNLKRDTAG--- 592

Query: 295  SDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNNDQKT 143
                       GGLSGNGEQT+  SSWDG SSSWQ LSTS   F  NNDQK+
Sbjct: 593  -----------GGLSGNGEQTLGASSWDGGSSSWQDLSTSAFSFSANNDQKS 633


>gb|ONK75729.1| uncharacterized protein A4U43_C03F19930 [Asparagus officinalis]
          Length = 1710

 Score =  866 bits (2238), Expect = 0.0
 Identities = 450/604 (74%), Positives = 495/604 (81%), Gaps = 2/604 (0%)
 Frame = -3

Query: 1948 RSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSV 1769
            +   K+F+ AGK  YLP  VK           LIKDRYG+GSEY VYDEDPK+ +  VSV
Sbjct: 27   KESSKDFKGAGKSPYLPIFVKEEEVSGDELEELIKDRYGKGSEYVVYDEDPKQDNAAVSV 86

Query: 1768 ELSAEDPKIWRVKCMAGREQQMVLSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEAD 1589
            E  A DP IW+VKCM G+EQQ+VLSLMHKYADLQRLGTKM+IISAFTLEHVKGYVYIEAD
Sbjct: 87   EHLAGDPNIWKVKCMVGKEQQIVLSLMHKYADLQRLGTKMDIISAFTLEHVKGYVYIEAD 146

Query: 1588 KACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQ 1409
            KACD+VEACKGFFNIY+TRMGLVP+ +IPHLLS RNK C +SKGTWVRMK+GNYKGDLGQ
Sbjct: 147  KACDVVEACKGFFNIYSTRMGLVPNTEIPHLLSIRNKACILSKGTWVRMKSGNYKGDLGQ 206

Query: 1408 VVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIR 1229
            VVDYD+ RK+ATIKLVPRIDLQAIAKK+GGGVSLKEAAVP+PRLISS ELE FRSHIEIR
Sbjct: 207  VVDYDDMRKKATIKLVPRIDLQAIAKKFGGGVSLKEAAVPSPRLISSHELEQFRSHIEIR 266

Query: 1228 RDRHSGEYFEILDGLMLKDGFLYKKVSLASIVFWGVQPSKDELLKFTEMTKADEEDVSWL 1049
            RDRHSGE FEILDGLMLKDG+LYKKVS+ASIV+WGV+PSKDELLKFTEM+K +EEDVSWL
Sbjct: 267  RDRHSGECFEILDGLMLKDGYLYKKVSIASIVYWGVEPSKDELLKFTEMSKPEEEDVSWL 326

Query: 1048 STVYNVRKKMKSSEAADAKGASELGNGFILHDLVLFGRKGFGV-XXXXXXXXXXXXXXXK 872
            S+VYNVRKK+K S+ +D KG+SE GN F LHDLVLFGRK FGV                K
Sbjct: 327  SSVYNVRKKIKPSKDSDLKGSSEKGNSFNLHDLVLFGRKAFGVIIDMGKDGTMKVLRGDK 386

Query: 871  EGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTL 692
            EGQEV+T+K+E IKS CVDKMFTASDRHRKTI IND +KVL+GPLEGR+G   HMYKGTL
Sbjct: 387  EGQEVITVKAEAIKSQCVDKMFTASDRHRKTICINDIIKVLEGPLEGRQGTACHMYKGTL 446

Query: 691  FIYDENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTF 512
            FIYDE+QE NSGIFC KSDLCE ITP KD SF K GNK+SSSF+Q PV S EQEDSS  F
Sbjct: 447  FIYDESQEGNSGIFCTKSDLCEKITPAKD-SFGK-GNKASSSFSQDPVISSEQEDSS--F 502

Query: 511  SRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSI 332
            SRNR  ESNQ FS+GQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITV+EQ LS 
Sbjct: 503  SRNRRRESNQIFSVGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVDEQLLSD 562

Query: 331  PNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNN 155
            PN+KRD A               GGLSGNGEQT+  SSWDG SSSWQ LSTS   F  NN
Sbjct: 563  PNLKRDTAG--------------GGLSGNGEQTLGASSWDGGSSSWQDLSTSAFSFSANN 608

Query: 154  DQKT 143
            DQK+
Sbjct: 609  DQKS 612


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score =  712 bits (1837), Expect = 0.0
 Identities = 377/697 (54%), Positives = 471/697 (67%), Gaps = 9/697 (1%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2036
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2035 XXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 1856
                                         +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLD------FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 114

Query: 1855 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYA 1676
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 115  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 174

Query: 1675 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1496
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 175  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 234

Query: 1495 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1316
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 235  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 294

Query: 1315 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASI 1136
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +GE F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 295  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 354

Query: 1135 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 956
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 355  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 414

Query: 955  DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 776
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 415  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 474

Query: 775  YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSF 596
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 475  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 530

Query: 595  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 416
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 531  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 587

Query: 415  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 236
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE    GLS  G Q
Sbjct: 588  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-Q 642

Query: 235  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKT 143
             V    WD +       SWQA   S     +NND K+
Sbjct: 643  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKS 679


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score =  712 bits (1837), Expect = 0.0
 Identities = 377/697 (54%), Positives = 471/697 (67%), Gaps = 9/697 (1%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2036
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2035 XXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 1856
                                         +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLVTD----FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 116

Query: 1855 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYA 1676
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 117  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 176

Query: 1675 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1496
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 177  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 236

Query: 1495 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1316
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 237  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 296

Query: 1315 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASI 1136
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +GE F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 297  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 356

Query: 1135 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 956
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 357  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 416

Query: 955  DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 776
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 417  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 476

Query: 775  YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSF 596
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 477  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 532

Query: 595  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 416
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 533  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 589

Query: 415  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 236
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE    GLS  G Q
Sbjct: 590  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQE----GLSIAG-Q 644

Query: 235  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKT 143
             V    WD +       SWQA   S     +NND K+
Sbjct: 645  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKS 681


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score =  711 bits (1834), Expect = 0.0
 Identities = 374/697 (53%), Positives = 469/697 (67%), Gaps = 9/697 (1%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2036
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2035 XXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 1856
                                         +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLD------FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 114

Query: 1855 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYA 1676
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 115  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 174

Query: 1675 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1496
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 175  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 234

Query: 1495 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1316
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 235  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 294

Query: 1315 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASI 1136
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +GE F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 295  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 354

Query: 1135 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 956
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 355  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 414

Query: 955  DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 776
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 415  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 474

Query: 775  YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSF 596
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 475  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 530

Query: 595  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 416
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 531  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 587

Query: 415  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 236
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE  + G      Q
Sbjct: 588  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------Q 641

Query: 235  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKT 143
             V    WD +       SWQA   S     +NND K+
Sbjct: 642  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKS 678


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score =  711 bits (1834), Expect = 0.0
 Identities = 374/697 (53%), Positives = 469/697 (67%), Gaps = 9/697 (1%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKA---QAXXXXXXXXXXXXXXXXGPGDQRRKRRAGVLQFFXXXXXXXX 2036
            MA+K KGKQ+AGKA    A                  G +R+K+R GVLQFF        
Sbjct: 1    MALKGKGKQVAGKALDATAASSSSGKRKKPAAEEEASGGRRKKKRPGVLQFFDDAAVDAD 60

Query: 2035 XXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 1856
                                         +S  ++ R  GK   +PF +K          
Sbjct: 61   SDDEDEDLDLGEEDADLVTD----FMDASKSGNEDIRPVGKSHPVPFFLKEEELSGDELE 116

Query: 1855 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYA 1676
             LIKDRYG GSE+ VY+ED KE DD +S   S +DP +WRVKCM GRE+Q+    M KY 
Sbjct: 117  ALIKDRYGHGSEFVVYNEDSKERDDRISEVDSLKDPTVWRVKCMGGRERQIAFCFMQKYI 176

Query: 1675 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1496
            DL   G+KM+IISAF L+HVKGYV+IEADK CDI+EACKGF+++Y++++  VP +++P L
Sbjct: 177  DLNNYGSKMQIISAFALDHVKGYVFIEADKECDIIEACKGFYSVYSSKINRVPGSEVPQL 236

Query: 1495 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1316
             S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KL+PR+DLQAI+KK+GGG
Sbjct: 237  FSSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLIPRVDLQAISKKFGGG 296

Query: 1315 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASI 1136
            +SLK+AAVPAPRLISS ELE FR HIE+RRDR +GE F+ILDGLMLKDGFLYK+VS+ S+
Sbjct: 297  ISLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFDILDGLMLKDGFLYKRVSIGSV 356

Query: 1135 VFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILH 956
            + W VQPS  ELLKF+ ++K  +ED++W+S+VY  R KM+ SEAAD K  ++ GNGF LH
Sbjct: 357  ICWAVQPSDMELLKFSNVSKVGDEDLTWVSSVYRGRNKMRLSEAADQKVLAKKGNGFNLH 416

Query: 955  DLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTI 776
            D VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI
Sbjct: 417  DFVLFGHKAFGVIIAVEKDGFRILKGGMEGPEVVTVKVQDIKSACVDKMFTASDRYMKTI 476

Query: 775  YINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSF 596
             INDTVKVL+GPL+ R+G+VRHMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K    
Sbjct: 477  SINDTVKVLEGPLQDRQGIVRHMYKGTLFIYDENETENSGFFCAKSASCENLKELK---- 532

Query: 595  RKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRV 416
               G KSS SF Q P+RS E++D S+ F+ +R S+ +Q FSIGQTLRIRKGPLKGYLCRV
Sbjct: 533  ---GEKSSHSFFQPPMRSSEEQDRSHGFNWHRQSDRDQIFSIGQTLRIRKGPLKGYLCRV 589

Query: 415  VRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFTGGLSGNGEQ 236
            V +YRSDVTVKLDSLVKVITVE ++LS+PN+KRD +A   S+ FGTQE  + G      Q
Sbjct: 590  VGVYRSDVTVKLDSLVKVITVEAEYLSVPNVKRDDSAATTSNTFGTQEGLSIG------Q 643

Query: 235  TVVTSSWDGA-----SSSWQALSTSTLFG-NNNDQKT 143
             V    WD +       SWQA   S     +NND K+
Sbjct: 644  HVDNGQWDASVPSFGRGSWQAFPGSNSSDVDNNDHKS 680


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score =  688 bits (1776), Expect = 0.0
 Identities = 365/688 (53%), Positives = 459/688 (66%), Gaps = 3/688 (0%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGDQ--RRKRRAGVLQFFXXXXXXXXX 2033
            MA K KGKQ+AGKA                    G    RRK+R GVLQFF         
Sbjct: 1    MASKGKGKQVAGKAPDAAALSSSSGKRKKPAAEAGASGGRRKKRPGVLQFFDDAAVDADS 60

Query: 2032 XXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXX 1853
                                             + R  GK   LPF +K           
Sbjct: 61   DDEDKDLDLEEEDAHLDFMD-------ASKSVNDVRPVGKSHPLPFFLKEEELSGDELEA 113

Query: 1852 LIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYAD 1673
            LIKDRYG GSE+ VY+ED KE DD VS   S +DP +WRVKCM GRE+Q+    M KY D
Sbjct: 114  LIKDRYGHGSEFVVYNEDSKERDDRVSEVDSLKDPSVWRVKCMVGRERQIAFCFMQKYID 173

Query: 1672 LQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLL 1493
            L   G K++IISAF L+HVKGYV+IEADK  D+ EACKGF+++Y++++  V  +++P L 
Sbjct: 174  LNNFGNKIQIISAFALDHVKGYVFIEADKEYDVTEACKGFYSVYSSKINRVHGSEVPQLF 233

Query: 1492 STRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGV 1313
            S+R+K C +S+G+WVRMK+G YKGDL QVV  D+ +K+  +KLVPR+DLQAI+KK+GGGV
Sbjct: 234  SSRSKSCEVSEGSWVRMKSGKYKGDLAQVVAVDDGQKKVMVKLVPRVDLQAISKKFGGGV 293

Query: 1312 SLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASIV 1133
            SLK+AAVPAPRLISS ELE FR HIE+RRDR +GE FEILDGLMLKDGFLYK+VS+ S++
Sbjct: 294  SLKQAAVPAPRLISSHELEMFRPHIEVRRDRQTGEIFEILDGLMLKDGFLYKRVSIGSVI 353

Query: 1132 FWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILHD 953
             WGVQPS  ELLKF+ + K  +E ++W+S+VY+ R KM+ +EAAD +  ++ GNGF LHD
Sbjct: 354  CWGVQPSDMELLKFSSVGKDGDEHLNWVSSVYHGRNKMRPTEAADQQVLAKKGNGFNLHD 413

Query: 952  LVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIY 773
             VLFG K FGV                EG EV+T+K +DIKS CVDKMFTASDR+ KTI 
Sbjct: 414  FVLFGHKAFGVIIAVEKDGFRILKGGVEGPEVVTVKIQDIKSACVDKMFTASDRYMKTIS 473

Query: 772  INDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFR 593
            INDTVKVL+GPL+ ++G+V+HMYKGTLFIYDEN+ ENSG FCAKS  CEN+   K     
Sbjct: 474  INDTVKVLEGPLQDKQGIVKHMYKGTLFIYDENETENSGFFCAKSASCENMKESK----- 528

Query: 592  KGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVV 413
              G KSS SF+Q+P+ S E++D S+ F+  R +E +Q FSIGQTLRIRKGPLKGYLCRVV
Sbjct: 529  --GEKSSHSFSQAPMGSYEEQDRSHGFNWRRQTERDQVFSIGQTLRIRKGPLKGYLCRVV 586

Query: 412  RIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQERFT-GGLSGNGEQ 236
             +YRSDVTVK+DSLVK+ITVE ++LS+PN+KRD +A   S+ FGTQER + G  + NG+ 
Sbjct: 587  GVYRSDVTVKVDSLVKIITVEAEYLSVPNVKRDDSAATTSNPFGTQERLSIGQHAENGQW 646

Query: 235  TVVTSSWDGASSSWQALSTSTLFGNNND 152
             V   S+     SWQA   S     +N+
Sbjct: 647  DVGVPSF--GRDSWQAFPASNFSDVDNN 672


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score =  655 bits (1689), Expect = 0.0
 Identities = 359/703 (51%), Positives = 451/703 (64%), Gaps = 15/703 (2%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2039
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2038 XXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 1859
                                          ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEEDFPDEC----------KAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 1858 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKY 1679
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 1678 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1499
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1498 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1319
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1318 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLAS 1139
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SGE FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1138 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 959
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 958  HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 779
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 778  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS- 602
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 601  -SFRKG-GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGY 428
             SF    G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKGY
Sbjct: 531  NSFDDNLGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGY 590

Query: 427  LCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGLS 251
            LCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  S
Sbjct: 591  LCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFS 650

Query: 250  GNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKT 143
             +G E     SSWD       S  WQ  S S L    N D KT
Sbjct: 651  ADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKT 693


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score =  654 bits (1688), Expect = 0.0
 Identities = 359/704 (50%), Positives = 451/704 (64%), Gaps = 16/704 (2%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2039
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2038 XXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 1859
                                          ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEEDFPDEC----------KAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 1858 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKY 1679
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 1678 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1499
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1498 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1319
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1318 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLAS 1139
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SGE FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1138 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 959
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 958  HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 779
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 778  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS- 602
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 601  -SFRKG--GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKG 431
             SF     G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKG
Sbjct: 531  NSFDDNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKG 590

Query: 430  YLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGL 254
            YLCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  
Sbjct: 591  YLCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPF 650

Query: 253  SGNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKT 143
            S +G E     SSWD       S  WQ  S S L    N D KT
Sbjct: 651  SADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKT 694


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score =  654 bits (1688), Expect = 0.0
 Identities = 359/704 (50%), Positives = 451/704 (64%), Gaps = 16/704 (2%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2039
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2038 XXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 1859
                                          ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEEDFPDEC----------KAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 1858 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKY 1679
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 1678 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1499
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1498 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1319
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1318 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLAS 1139
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SGE FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1138 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 959
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 958  HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 779
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 778  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS- 602
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 601  -SFRKG--GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKG 431
             SF     G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKG
Sbjct: 531  NSFDDNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKG 590

Query: 430  YLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGL 254
            YLCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  
Sbjct: 591  YLCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPF 650

Query: 253  SGNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKT 143
            S +G E     SSWD       S  WQ  S S L    N D KT
Sbjct: 651  SADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKT 694


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score =  654 bits (1688), Expect = 0.0
 Identities = 359/704 (50%), Positives = 451/704 (64%), Gaps = 16/704 (2%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2039
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2038 XXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 1859
                                          ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEEDFPDEC----------KAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 1858 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKY 1679
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 1678 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1499
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1498 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1319
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1318 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLAS 1139
            G+SLK AAVPAPRLISS EL+ FR  IE RRDR SGE FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELDEFRPLIETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 350

Query: 1138 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 959
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 351  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 410

Query: 958  HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 779
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 411  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 470

Query: 778  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS- 602
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 471  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 530

Query: 601  -SFRKG--GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKG 431
             SF     G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKG
Sbjct: 531  NSFDDNLQGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKG 590

Query: 430  YLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGL 254
            YLCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  
Sbjct: 591  YLCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPF 650

Query: 253  SGNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKT 143
            S +G E     SSWD       S  WQ  S S L    N D KT
Sbjct: 651  SADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKT 694


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score =  647 bits (1669), Expect = 0.0
 Identities = 358/703 (50%), Positives = 449/703 (63%), Gaps = 15/703 (2%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGK---AQAXXXXXXXXXXXXXXXXGPGDQRRKR-RAGVLQFFXXXXXXX 2039
            MAVK KGKQ+A     A A                     R KR R GVLQFF       
Sbjct: 1    MAVKGKGKQVASSPSSASAKRKNPAAEAAQGSGGAASSRGRAKRGRPGVLQFFDDAAMDA 60

Query: 2038 XXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXX 1859
                                          ++E ++ +   +P +LPF VK         
Sbjct: 61   DDDELESGGEDAEEDFPDEC----------KAENEDLKGTARPPHLPFFVKEEELSGDEL 110

Query: 1858 XXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKY 1679
              LIKDRYGR S+Y V+ ED KE  D VS     +DP +W++KCM GRE+QM    M K+
Sbjct: 111  EELIKDRYGRSSKYVVHAEDSKESGDEVSAADLMKDPTVWKIKCMIGRERQMAFCFMQKF 170

Query: 1678 ADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPH 1499
             DL  LG K++I+SAF L+HVKG+V++EADKA D+ EACKGF NIY  R+ LVP +++ H
Sbjct: 171  VDLDCLGNKLQIVSAFALDHVKGFVFVEADKANDVSEACKGFCNIYPGRINLVPPSEVSH 230

Query: 1498 LLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGG 1319
            LLS+RNK C IS+G+WVRMK+G YKGDL QVV+ D+ RKR  IKL+PRIDLQAI+KK+GG
Sbjct: 231  LLSSRNKSCGISQGSWVRMKSGKYKGDLAQVVNLDDGRKRVMIKLIPRIDLQAISKKFGG 290

Query: 1318 GVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLAS 1139
            G+SLK AAVPAPRLISS ELE     IE RRDR SGE FE+LDG+MLKDG++YK VS  S
Sbjct: 291  GLSLKHAAVPAPRLISSHELEPL---IETRRDRQSGEVFEVLDGMMLKDGYMYKWVSNGS 347

Query: 1138 IVFWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFIL 959
            +VFWGVQPS+ ELLKF+ + K D ED+ W+S+VY+ RKK++ ++ +D    +   N + L
Sbjct: 348  VVFWGVQPSESELLKFSNVNKDDSEDLDWVSSVYSGRKKVRLTDDSDNVATTSRKNEYKL 407

Query: 958  HDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKT 779
            HDLVLFG+K FGV                EG  V+T++ +DIKS CVDKMFTA DRH KT
Sbjct: 408  HDLVLFGQKDFGVIVTVEKDGVRILKGGTEGSAVVTLRKQDIKSGCVDKMFTALDRHSKT 467

Query: 778  IYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDS- 602
            I +ND VKVL+G LEGR+G+V+H+Y+G++FIYDEN+ ENSG FCAKS+ CE I   ++S 
Sbjct: 468  ISVNDIVKVLEGSLEGRQGIVKHLYRGSIFIYDENETENSGFFCAKSESCEKIKKSRESV 527

Query: 601  -SFRKG-GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGY 428
             SF    G+ S+S F++ P  S E +DSS    R R  + +  FSIGQTLRI KGPLKGY
Sbjct: 528  NSFDDNLGDGSASLFSEPPTISFENQDSSSGAGRRRQYDRDSLFSIGQTLRICKGPLKGY 587

Query: 427  LCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAEMPSDIFGTQER-FTGGLS 251
            LCRVVRI+RS+VTVKLDSLVK+ITV+ +FLS+P  KRD +    SD+FGTQE    G  S
Sbjct: 588  LCRVVRIFRSEVTVKLDSLVKIITVDAKFLSVPTRKRDDSTGAASDLFGTQEMPSIGPFS 647

Query: 250  GNG-EQTVVTSSWDG-----ASSSWQALSTSTL-FGNNNDQKT 143
             +G E     SSWD       S  WQ  S S L    N D KT
Sbjct: 648  ADGTESQPGRSSWDSPLPSFGSDGWQPFSASKLSAAGNTDNKT 690


>ref|XP_020682212.1| protein RNA-directed DNA methylation 3 [Dendrobium catenatum]
 gb|PKU72137.1| Putative transcription elongation factor SPT5 like 1 [Dendrobium
            catenatum]
          Length = 1946

 Score =  615 bits (1585), Expect = 0.0
 Identities = 346/723 (47%), Positives = 441/723 (60%), Gaps = 36/723 (4%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGP-GDQRRKRRAGVLQFFXXXXXXXXXX 2030
            MAVK KGKQIAGK+ A                   G    K+ +GVLQF           
Sbjct: 1    MAVKGKGKQIAGKSPASSASSSGKRRRTRADGESSGAPPPKKPSGVLQFVDDTAADADFE 60

Query: 2029 XXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEF-RSAGKPQYLPFLVKXXXXXXXXXXX 1853
                                 D+   G  E K   R  GK   +PF +K           
Sbjct: 61   GEEDEDELDWEIDDDFDFELPDI---GTKELKNVTRGPGKSSPVPFFIKEEEMNDDELEE 117

Query: 1852 LIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYAD 1673
             IK+RYG GS +  +DED KECD  + V  + +D  +WRVKCM GRE+Q    LM K+ D
Sbjct: 118  AIKERYG-GSGFVSFDEDVKECDQSLLVARATKDLSVWRVKCMMGRERQAAFCLMQKFVD 176

Query: 1672 LQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLL 1493
            LQ++G K++I S F+L+HVKG+ Y+EAD+AC++ EAC G   +Y +R+ LVP N+ P+LL
Sbjct: 177  LQKIGKKLQIFSVFSLDHVKGFFYVEADRACNVFEACNGLCILYPSRIELVPRNEAPNLL 236

Query: 1492 STRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGV 1313
            S + K C I KG WVRMKNG YKGDL +VV  ++A+KR TIKLVPRIDLQAI+KK+GGG 
Sbjct: 237  SIQRKACGIVKGMWVRMKNGKYKGDLAEVVLVNDAKKRVTIKLVPRIDLQAISKKFGGGT 296

Query: 1312 SLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASIV 1133
            SLK AA+PAPRLISS ELE FR HIE+RRDR +GE FE+LDGLMLKDG+LYKKVS+ S++
Sbjct: 297  SLKAAAIPAPRLISSHELEDFRPHIEVRRDRETGEIFEVLDGLMLKDGYLYKKVSMGSLI 356

Query: 1132 FWGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKM---------------------- 1019
             WGVQP+ DEL+KF E+ K + +DV WLS++Y  R K                       
Sbjct: 357  HWGVQPTSDELMKFEELDKDEVKDVDWLSSIYKARMKKKLPETSHQKNGEKYNQKDGEKS 416

Query: 1018 --KSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIK 845
              K  E ++ K A +  NGF + DLVLFG+K  G+                 G EV++I 
Sbjct: 417  NPKVGEKSNQKDADKQINGFDIDDLVLFGKKSCGIIIDKENDTFKVLKGDVNGSEVVSIN 476

Query: 844  SEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEE 665
               IK  CVDK+FTA+DR  KTI I+D VKV +GPLEGREG+VRHMYKG LFIYDE Q E
Sbjct: 477  IRVIKKICVDKVFTATDRCMKTISIDDVVKVFEGPLEGREGIVRHMYKGVLFIYDECQSE 536

Query: 664  NSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESN 485
            N+G FCA S +C+ +   +D    K   ++  SF QSP+R  EQ+D+S +FSRN+ S S 
Sbjct: 537  NNGFFCANSGICDLVKKSRDLGGGKLSTRAGPSFAQSPIRLSEQDDNSQSFSRNQQSNSL 596

Query: 484  QPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAA 305
              FS+GQTLRIRKGPLKGYLCRV+R+ R+D+TVKLDSL K++TV+E+ LS+PN KRD A 
Sbjct: 597  GTFSVGQTLRIRKGPLKGYLCRVIRMRRADITVKLDSLGKLLTVDEKLLSLPNSKRDDAT 656

Query: 304  EMPSDIFGTQE-RFTGGL--SGNG------EQTVVTSSWDGASSSWQALSTSTL-FGNNN 155
             M  ++FG+QE + T GL  +G G      E     SS+     SW   S S+  F   N
Sbjct: 657  AMQCNMFGSQEDQSTDGLLDAGGGLGMDNFEFNAGMSSF--GRDSWNTASCSSFSFPREN 714

Query: 154  DQK 146
            D K
Sbjct: 715  DSK 717


>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  610 bits (1572), Expect = 0.0
 Identities = 334/701 (47%), Positives = 442/701 (63%), Gaps = 15/701 (2%)
 Frame = -3

Query: 2200 VKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGD-QRRKRRAGVLQFFXXXXXXXXXXXX 2024
            +K KGKQ+ GK  A                 PG  ++R+RR GVLQFF            
Sbjct: 1    MKGKGKQVVGKVAASAASSSSVKRKTAASENPGGCRKRRRRPGVLQFFDDAAVDADSDCD 60

Query: 2023 XXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIK 1844
                                 +  G+ E K+    G+  +LPF VK            I 
Sbjct: 61   NKEESEVDEKITDLD-----FADDGKYENKKITGDGQSHHLPFFVKEELSGDELEEL-IN 114

Query: 1843 DRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYADLQR 1664
            DRY  GSE+  Y++D  ECD   S     +D  IW+VKCM GRE+QM    M KY +L+ 
Sbjct: 115  DRYAHGSEHVTYNDDSAECDVKASEADGMKDVIIWKVKCMVGRERQMTFCFMQKYVELEN 174

Query: 1663 LGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTR 1484
            LGTK++I S F LEHVKGYV++EADK  D++EACKGF ++Y++R+ +VP +++PHLL+ R
Sbjct: 175  LGTKLQISSVFALEHVKGYVFVEADKLYDVIEACKGFCSVYSSRINIVPRSEVPHLLAIR 234

Query: 1483 NKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLK 1304
            NK   +  G  VR+K+G YKGDL QVV  D+ +K+ TIKLVPRIDLQAIAKK+GGG+SLK
Sbjct: 235  NKLPEVCTGKLVRLKSGKYKGDLAQVVAVDDGQKQLTIKLVPRIDLQAIAKKFGGGISLK 294

Query: 1303 EAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASIVFWG 1124
             AAVPAPRLISS ELE FR HIE++RDR +GE FE+LDG+MLKDG+L+KKVS  S++F G
Sbjct: 295  LAAVPAPRLISSHELESFRPHIEVKRDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSG 354

Query: 1123 VQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVL 944
            VQPS  ELL F+++T    ED++W+S++YN RKK   +E  D + +    N + LHDLVL
Sbjct: 355  VQPSSSELLMFSDVTNNMVEDLNWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVL 414

Query: 943  FGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYIND 764
            FG+K +GV                EG+ V+T+K +DIK+ CVDKMFTA D  + TI+IND
Sbjct: 415  FGQKHYGVIIAVEKDCFKILKGDIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFIND 474

Query: 763  TVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKG- 587
             VK+L GPL+GREGVV+HMYKGTLFI+ E + +NSG F  KS  CE +   K+S   K  
Sbjct: 475  IVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAG 534

Query: 586  -GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 410
             G ++++SF+QSP+R+ ++E++++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV 
Sbjct: 535  KGKEANTSFSQSPIRTFDRENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVG 594

Query: 409  IYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFA------AEMPSDIFGTQERFTGGLSG 248
            IYRSDVTVKLDSLVK+ITV+++ L++P IK D A      A + SD FG          G
Sbjct: 595  IYRSDVTVKLDSLVKLITVKDKSLAVPKIKGDNATGSSDQATISSDHFGLSTACPS--FG 652

Query: 247  NGEQTVVTSSWDG-----ASSSWQALSTS-TLFGNNNDQKT 143
                    SSWD         SWQ  S+S +    NN+ +T
Sbjct: 653  ETSTPAEKSSWDSVMPSFGRDSWQPFSSSNSSVACNNENQT 693


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  610 bits (1572), Expect = 0.0
 Identities = 334/701 (47%), Positives = 442/701 (63%), Gaps = 15/701 (2%)
 Frame = -3

Query: 2200 VKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGD-QRRKRRAGVLQFFXXXXXXXXXXXX 2024
            +K KGKQ+ GK  A                 PG  ++R+RR GVLQFF            
Sbjct: 1    MKGKGKQVVGKVAASAASSSSVKRKTAASENPGGCRKRRRRPGVLQFFDDAAVDADSDCD 60

Query: 2023 XXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXLIK 1844
                                 +  G+ E K+    G+  +LPF VK            I 
Sbjct: 61   NKEESEVDEKITDLVD----FADDGKYENKKITGDGQSHHLPFFVKEELSGDELEEL-IN 115

Query: 1843 DRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYADLQR 1664
            DRY  GSE+  Y++D  ECD   S     +D  IW+VKCM GRE+QM    M KY +L+ 
Sbjct: 116  DRYAHGSEHVTYNDDSAECDVKASEADGMKDVIIWKVKCMVGRERQMTFCFMQKYVELEN 175

Query: 1663 LGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLSTR 1484
            LGTK++I S F LEHVKGYV++EADK  D++EACKGF ++Y++R+ +VP +++PHLL+ R
Sbjct: 176  LGTKLQISSVFALEHVKGYVFVEADKLYDVIEACKGFCSVYSSRINIVPRSEVPHLLAIR 235

Query: 1483 NKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVSLK 1304
            NK   +  G  VR+K+G YKGDL QVV  D+ +K+ TIKLVPRIDLQAIAKK+GGG+SLK
Sbjct: 236  NKLPEVCTGKLVRLKSGKYKGDLAQVVAVDDGQKQLTIKLVPRIDLQAIAKKFGGGISLK 295

Query: 1303 EAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASIVFWG 1124
             AAVPAPRLISS ELE FR HIE++RDR +GE FE+LDG+MLKDG+L+KKVS  S++F G
Sbjct: 296  LAAVPAPRLISSHELESFRPHIEVKRDRLTGELFEVLDGMMLKDGYLFKKVSTGSVIFSG 355

Query: 1123 VQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKKMKSSEAADAKGASELGNGFILHDLVL 944
            VQPS  ELL F+++T    ED++W+S++YN RKK   +E  D + +    N + LHDLVL
Sbjct: 356  VQPSSSELLMFSDVTNNMVEDLNWVSSIYNARKKKPGAEILDDEVSVVTKNDYGLHDLVL 415

Query: 943  FGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSEDIKSHCVDKMFTASDRHRKTIYIND 764
            FG+K +GV                EG+ V+T+K +DIK+ CVDKMFTA D  + TI+IND
Sbjct: 416  FGQKHYGVIIAVEKDCFKILKGDIEGENVVTVKIQDIKNSCVDKMFTALDWKKTTIFIND 475

Query: 763  TVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSGIFCAKSDLCENITPPKDSSFRKG- 587
             VK+L GPL+GREGVV+HMYKGTLFI+ E + +NSG F  KS  CE +   K+S   K  
Sbjct: 476  IVKILAGPLQGREGVVKHMYKGTLFIHAEYETKNSGFFSVKSVSCEKVKESKNSYGVKAG 535

Query: 586  -GNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQPFSIGQTLRIRKGPLKGYLCRVVR 410
             G ++++SF+QSP+R+ ++E++++  +R   S++ Q FSIGQTLRIR+GPLKGYLCRVV 
Sbjct: 536  KGKEANTSFSQSPIRTFDRENNAHGSTRRGQSDNEQMFSIGQTLRIREGPLKGYLCRVVG 595

Query: 409  IYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFA------AEMPSDIFGTQERFTGGLSG 248
            IYRSDVTVKLDSLVK+ITV+++ L++P IK D A      A + SD FG          G
Sbjct: 596  IYRSDVTVKLDSLVKLITVKDKSLAVPKIKGDNATGSSDQATISSDHFGLSTACPS--FG 653

Query: 247  NGEQTVVTSSWDG-----ASSSWQALSTS-TLFGNNNDQKT 143
                    SSWD         SWQ  S+S +    NN+ +T
Sbjct: 654  ETSTPAEKSSWDSVMPSFGRDSWQPFSSSNSSVACNNENQT 694


>gb|KQL14825.1| hypothetical protein SETIT_021349mg [Setaria italica]
          Length = 711

 Score =  575 bits (1482), Expect = 0.0
 Identities = 319/701 (45%), Positives = 428/701 (61%), Gaps = 30/701 (4%)
 Frame = -3

Query: 2206 MAVKEKGKQIA--------GKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFF 2060
            MAVK KGKQ+A        G A                  GP      +R+RRAGV QF 
Sbjct: 1    MAVKGKGKQVAADPPGPDAGSASGSGGKRRNGYGYGYARAGPSSSSAAKRRRRAGVQQFV 60

Query: 2059 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXX 1880
                                             + G  ++    + A +   LPFLVK  
Sbjct: 61   DDAAGVDDDYEEEDVLESEEEASDPDDGF---FTGGEHAQNLSSKRAERSHPLPFLVKEE 117

Query: 1879 XXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMV 1700
                      I+ RY  G  YA      +E DD   ++ + ++P IWRVKCM GRE+QM 
Sbjct: 118  ELSGDELEEFIRKRYSNGVRYAADRNFSREDDDIFPMDGALKEPTIWRVKCMVGRERQMA 177

Query: 1699 LSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLV 1520
               M K+ DLQ++GTK+ II+AF L+HV+G+V++EA+KACD+ EACKGF ++YA+R+  V
Sbjct: 178  FCFMQKFVDLQKIGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSVYASRIISV 237

Query: 1519 PSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQA 1340
            P+ ++P LLS+R KP  IS+GTWVRMKNGNYKGDL QVV  D+ RKR  IK++PR+DL A
Sbjct: 238  PAAEVPSLLSSRTKPFEISRGTWVRMKNGNYKGDLAQVVSEDDGRKRVLIKIIPRVDLHA 297

Query: 1339 IAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLY 1160
            I++KYGG +SLKEA VPAPRLISSQELE FR HIE++RDR +GE FE+LDGLM KDGFLY
Sbjct: 298  ISRKYGGAISLKEAVVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLY 357

Query: 1159 KKVSLASIVFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK------------- 1025
            K+V+L+S+++WG+QP++ ELLKF+   + +A  +D+ W+S++Y  +K             
Sbjct: 358  KRVALSSLIYWGIQPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNLPAERGIKSPS 417

Query: 1024 -KMKSSEAADAKGASEL---GNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEV 857
             K KSS+A+ A  ++E     + F LHDLVLFGRK FGV                EG  V
Sbjct: 418  SKTKSSKASKASTSTENYDDNDEFNLHDLVLFGRKDFGVIIAIEKDGLRILKGGPEGSAV 477

Query: 856  MTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDE 677
             T+K +DIK  CVDKMFTA DR +K I INDTV VL+GP +G++GVV+H+Y GTLFIY+E
Sbjct: 478  -TVKKQDIKKGCVDKMFTAVDRQKKIISINDTVNVLEGPFQGKQGVVKHLYMGTLFIYNE 536

Query: 676  NQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRH 497
            ++ EN G FCA+   CEN+   K+SS  +  +     F++ P    E  D+     R   
Sbjct: 537  SESENCGFFCAQCGSCENVKKRKESSTTENLDNPIPMFSE-PYEQNEHRDT----ERPYR 591

Query: 496  SESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKR 317
            S   Q FSIGQ LRIRKGPLKGYLCRVV+I+R+DVTVKLDSL+K++TV+ +FLS+P  + 
Sbjct: 592  STREQLFSIGQMLRIRKGPLKGYLCRVVKIFRNDVTVKLDSLLKIVTVQAEFLSVPANRG 651

Query: 316  DFAAEMPSDIFGTQERFTGGLSGNGEQTVVTSSWDGASSSW 194
            D ++  P+  FG+Q+    G   +       +SWD    S+
Sbjct: 652  DNSSGAPAGNFGSQDTSFFGSEAD------KASWDNGLPSF 686


>ref|XP_020587140.1| protein RNA-directed DNA methylation 3 [Phalaenopsis equestris]
          Length = 1960

 Score =  605 bits (1559), Expect = 0.0
 Identities = 337/714 (47%), Positives = 434/714 (60%), Gaps = 27/714 (3%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGP-GDQRRKRRAGVLQFFXXXXXXXXXX 2030
            MAVK KGKQIAGKA A                   G   +K+ +GVL+F           
Sbjct: 1    MAVKGKGKQIAGKAPASSASSSGKRKSNPLDGESSGVPPKKKPSGVLRFVDEAAVDADYD 60

Query: 2029 XXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXXXL 1850
                                     G +      +  GK   LPF +K            
Sbjct: 61   GEKEEEDDLEWEIDEDFDFELP-DIGAKVAKNVSKGPGKSSPLPFFIKEEVMNDDELEEA 119

Query: 1849 IKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYADL 1670
            I +RY RGSE+  +D+D KEC++ + V  + +D  IWRVKCM GRE+Q    LM K+ DL
Sbjct: 120  IMERY-RGSEFISFDDDVKECNETLLVSHATKDLSIWRVKCMMGRERQTSFCLMQKFVDL 178

Query: 1669 QRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHLLS 1490
            Q++G K+ I S F L+HVKG+VY+EADKA ++ EAC G   +Y +R+ LVP N+ P+LLS
Sbjct: 179  QKIGKKLHIFSVFALDHVKGFVYVEADKAGNVFEACNGLCFLYPSRIELVPRNETPNLLS 238

Query: 1489 TRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGGVS 1310
             + K   ISKG WVR+KNG YKGDL +V+  ++++KR TIKLVPRIDLQAIAKK+GGG S
Sbjct: 239  IQKKSSGISKGMWVRLKNGKYKGDLAEVIFVNDSKKRVTIKLVPRIDLQAIAKKFGGGTS 298

Query: 1309 LKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASIVF 1130
            LK AA+PAPRLIS+ ELE FR HIE+RRDR +GE FE+LDGLMLKDG+LYKKVS+ S++ 
Sbjct: 299  LKAAAIPAPRLISTHELEDFRPHIEVRRDRETGEIFEVLDGLMLKDGYLYKKVSICSLIH 358

Query: 1129 WGVQPSKDELLKFTEMTKADEEDVSWLSTVYNVRKK------------------------ 1022
            WGVQPS DEL KF +M     +DV WLS++Y  + K                        
Sbjct: 359  WGVQPSSDELTKFEDMGNDGVKDVGWLSSIYKTQIKNKLPETSHQKNGEKSKQKNGEKSN 418

Query: 1021 MKSSEAADAKGASELGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKS 842
             K+ E ++ K   +  NGF + D VLFG+K  G+                   EV++I  
Sbjct: 419  RKNGEKSNQKDEDKQRNGFEIDDFVLFGKKDCGIIIDKENDVFKVLKGDANSSEVVSINI 478

Query: 841  EDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEEN 662
              IK +CVDK+FTA+DR  KTI+I+D VKV +GPLEGREG+V+HMYKG  FIYDE Q EN
Sbjct: 479  GVIKKNCVDKVFTATDRGMKTIFIDDVVKVSEGPLEGREGIVKHMYKGVFFIYDECQSEN 538

Query: 661  SGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRNRHSESNQ 482
            +G FCAKS++C+ +   +D    K  + +  SF QSP+RS EQ+D+S +FSRN  S S  
Sbjct: 539  NGFFCAKSEICDLVKKSRDFGGGKLSSNAGPSFAQSPIRSSEQDDNSQSFSRNHQSNSRG 598

Query: 481  PFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAAE 302
             FS+GQTLRI KGPLKGYLCRV+RIYR+DVTVKLDSL K++TV+E+ LS PN KRD A  
Sbjct: 599  TFSVGQTLRICKGPLKGYLCRVIRIYRADVTVKLDSLGKLLTVDEKLLSFPNSKRDDATT 658

Query: 301  MPSDIFGTQ-ERFTGGLSGNGEQTVVTSSWDGASSSWQALSTSTL-FGNNNDQK 146
            M  D+FG+Q E+  GGL  +G    + +S  G   SW   S S   F  +ND K
Sbjct: 659  MQCDMFGSQEEQPIGGLLDSGGGFGMDNSSFG-RESWNTPSCSGFSFSRDNDCK 711


>gb|AQK94720.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 748

 Score =  563 bits (1451), Expect = 0.0
 Identities = 318/704 (45%), Positives = 424/704 (60%), Gaps = 33/704 (4%)
 Frame = -3

Query: 2206 MAVKEKGKQIA--------GKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFF 2060
            MAVK KGKQ+A        G   A                GP      +R+RRAGVLQF 
Sbjct: 1    MAVKGKGKQVAAESPGPGAGAGGASGSGGKRRMASSDAGAGPSSSSAAKRRRRAGVLQFV 60

Query: 2059 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXX 1880
                                             + G  ++    +   +   LPFLVK  
Sbjct: 61   DDVAGVDDDYEEDELESEDDTDDGF-------FTGGEHAQNLSHKRTERSHPLPFLVKEE 113

Query: 1879 XXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMV 1700
                      IK+RY    +YA      +E DD  S++ + ++P IWRVKCM GRE+QM 
Sbjct: 114  ELSGDELEEFIKNRYSNRVKYAADRSYSREDDDIFSMDCALKEPTIWRVKCMVGRERQMA 173

Query: 1699 LSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLV 1520
               M K+ DL+++GTK+ II+AF L+H++G+V++EA+KACD+ EACKGF ++Y +R+  V
Sbjct: 174  FCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSVYTSRITSV 233

Query: 1519 PSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQA 1340
            P+ ++P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  D+ RK+  IK+VPR+DL A
Sbjct: 234  PAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHA 293

Query: 1339 IAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLY 1160
            I+KK+GG VSLK AAVPAPRLISSQELE FR HIEI+RDR +GE FE+LDGLM KDGFLY
Sbjct: 294  ISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLY 353

Query: 1159 KKVSLASIVFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK------------- 1025
            KKV+L+S+++WG+QP++ ELLKF+     +A  +D+ WLS +Y  +K             
Sbjct: 354  KKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSS 413

Query: 1024 -KMKSSEAADAKGASELGN-----GFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQ 863
             K++SS+A+D K ++   N      F LHDLVL+GRK FGV                EG 
Sbjct: 414  SKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGS 473

Query: 862  EVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIY 683
             V  ++ +DIK  CVDKMFTA D  +KTI INDTV V++GP +G++GVV+H+Y G LFIY
Sbjct: 474  AV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIY 532

Query: 682  DENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRN 503
            +E++ EN G FCA+S  CE I     SS  +  + ++  F   P  + EQ     T  R 
Sbjct: 533  NESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF---PEPAYEQNGHRDT-ERP 588

Query: 502  RHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNI 323
              S   Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DVTVKLDSL+K++TV+   LS+P  
Sbjct: 589  YRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPAN 648

Query: 322  KRDFAAEMPSDIFGTQE-RFTGGLSGNGEQTVVTSSWDGASSSW 194
            + D  +  P+  FG+Q+  F G  +G        +SWD    S+
Sbjct: 649  RGDNLSGAPASKFGSQDTSFFGSEAGK-------TSWDNGLPSF 685


>gb|AQK94721.1| Protein RNA-directed DNA methylation 3 [Zea mays]
          Length = 1116

 Score =  572 bits (1475), Expect = 0.0
 Identities = 326/721 (45%), Positives = 432/721 (59%), Gaps = 38/721 (5%)
 Frame = -3

Query: 2206 MAVKEKGKQIA--------GKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFF 2060
            MAVK KGKQ+A        G   A                GP      +R+RRAGVLQF 
Sbjct: 1    MAVKGKGKQVAAESPGPGAGAGGASGSGGKRRMASSDAGAGPSSSSAAKRRRRAGVLQFV 60

Query: 2059 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXX 1880
                                             + G  ++    +   +   LPFLVK  
Sbjct: 61   DDVAGVDDDYEEDELESEDDTDDGF-------FTGGEHAQNLSHKRTERSHPLPFLVKEE 113

Query: 1879 XXXXXXXXXLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMV 1700
                      IK+RY    +YA      +E DD  S++ + ++P IWRVKCM GRE+QM 
Sbjct: 114  ELSGDELEEFIKNRYSNRVKYAADRSYSREDDDIFSMDCALKEPTIWRVKCMVGRERQMA 173

Query: 1699 LSLMHKYADLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLV 1520
               M K+ DL+++GTK+ II+AF L+H++G+V++EA+KACD+ EACKGF ++Y +R+  V
Sbjct: 174  FCFMQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSVYTSRITSV 233

Query: 1519 PSNDIPHLLSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQA 1340
            P+ ++P LLS+R KP  IS+GTW+RMKNGNYKGDL QVV  D+ RK+  IK+VPR+DL A
Sbjct: 234  PAAEVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLAQVVSVDDGRKKVMIKIVPRVDLHA 293

Query: 1339 IAKKYGGGVSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLY 1160
            I+KK+GG VSLK AAVPAPRLISSQELE FR HIEI+RDR +GE FE+LDGLM KDGFLY
Sbjct: 294  ISKKFGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLY 353

Query: 1159 KKVSLASIVFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK------------- 1025
            KKV+L+S+++WG+QP++ ELLKF+     +A  +D+ WLS +Y  +K             
Sbjct: 354  KKVALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKRNLPEKRDMESSS 413

Query: 1024 -KMKSSEAADAKGASELGN-----GFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQ 863
             K++SS+A+D K ++   N      F LHDLVL+GRK FGV                EG 
Sbjct: 414  SKIRSSKASDLKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGS 473

Query: 862  EVMTIKSEDIKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIY 683
             V  ++ +DIK  CVDKMFTA D  +KTI INDTV V++GP +G++GVV+H+Y G LFIY
Sbjct: 474  AV-KVRKQDIKKGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIY 532

Query: 682  DENQEENSGIFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPVRSCEQEDSSYTFSRN 503
            +E++ EN G FCA+S  CE I     SS  +  + ++  F   P  + EQ     T  R 
Sbjct: 533  NESESENCGFFCAQSGSCEKIRKGLGSSTTESSDFTTPMF---PEPAYEQNGHRDT-ERP 588

Query: 502  RHSESNQPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNI 323
              S   Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DVTVKLDSL+K++TV+   LS+P  
Sbjct: 589  YRSTREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPAN 648

Query: 322  KRDFAAEMPSDIFGTQE-RFTGGLSGNGEQTVVTSSWDG-----ASSSWQALSTSTLFGN 161
            + D  +  P+  FG+Q+  F G  +G        +SWD       S SWQ  S+STL   
Sbjct: 649  RGDNLSGAPASKFGSQDTSFFGSEAGK-------TSWDNGLPSFGSDSWQPFSSSTLSVQ 701

Query: 160  N 158
            N
Sbjct: 702  N 702


>gb|PAN18741.1| hypothetical protein PAHAL_C02415 [Panicum hallii]
          Length = 1664

 Score =  586 bits (1511), Expect = 0.0
 Identities = 329/710 (46%), Positives = 433/710 (60%), Gaps = 31/710 (4%)
 Frame = -3

Query: 2206 MAVKEKGKQIAGKAQAXXXXXXXXXXXXXXXXGPGDQ---RRKRRAGVLQFFXXXXXXXX 2036
            MAVK KGKQ+A ++                  GP      +R+RRAGVLQF         
Sbjct: 1    MAVKGKGKQVAAESPGPGAGGKRRKGSGDAEAGPSSSSAAKRRRRAGVLQFVDDAAGVDD 60

Query: 2035 XXXXXXXXXXXXXXXXXXXXXXXDLSKGGRSEGKEFRSAGKPQYLPFLVKXXXXXXXXXX 1856
                                     + G   +    +   +   LPFLVK          
Sbjct: 61   DYEEDEVLQSEEEASDPDDGF---FTGGEHVQNLSHKRTERSHPLPFLVKEEELSGDELE 117

Query: 1855 XLIKDRYGRGSEYAVYDEDPKECDDGVSVELSAEDPKIWRVKCMAGREQQMVLSLMHKYA 1676
              I+ RY  G +YA      +E DD   ++ + ++P IWRVKCM GRE+QM    M K+ 
Sbjct: 118  EFIRTRYSNGVKYAADRSYSREDDDIFPIDGALKEPTIWRVKCMVGRERQMAFCFMQKFV 177

Query: 1675 DLQRLGTKMEIISAFTLEHVKGYVYIEADKACDIVEACKGFFNIYATRMGLVPSNDIPHL 1496
            DLQ++GTK+ II+AF L+HV+G+V++EA+KACD+ EACKGF ++YA+R+  VP+ ++P L
Sbjct: 178  DLQKIGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSVYASRITSVPAAEVPSL 237

Query: 1495 LSTRNKPCTISKGTWVRMKNGNYKGDLGQVVDYDEARKRATIKLVPRIDLQAIAKKYGGG 1316
            LS+R KP  IS+GTWVRMKNGNYKGDL QVV  D  RKR  IK++PR+DL AI+KKYGG 
Sbjct: 238  LSSRTKPFEISRGTWVRMKNGNYKGDLAQVVSVDNGRKRVMIKIIPRVDLHAISKKYGGA 297

Query: 1315 VSLKEAAVPAPRLISSQELEHFRSHIEIRRDRHSGEYFEILDGLMLKDGFLYKKVSLASI 1136
            +SLK AAVPAPRLISSQELE FR HIE++RDR +GE FE+LDGLM KDGFLYK+V+L+S+
Sbjct: 298  ISLKGAAVPAPRLISSQELEFFRPHIEMKRDRQTGEVFEVLDGLMFKDGFLYKRVALSSL 357

Query: 1135 VFWGVQPSKDELLKFTE--MTKADEEDVSWLSTVYNVRK---------------KMKSSE 1007
            ++WG+QP++ ELLKF+   + +A  +D+ W+S++Y  +K               KMKSS+
Sbjct: 358  IYWGIQPTETELLKFSSSPINRASADDLDWVSSIYGPKKRNIPAKPDIKSSSSSKMKSSK 417

Query: 1006 AADAKGASE---LGNGFILHDLVLFGRKGFGVXXXXXXXXXXXXXXXKEGQEVMTIKSED 836
             + A  ++E     + F LHDLVLFGRK FGV                EG  V T+K  D
Sbjct: 418  TSKASISTEDFDDNDEFNLHDLVLFGRKDFGVIIAIEKDGFRILKGGPEGSAV-TVKKND 476

Query: 835  IKSHCVDKMFTASDRHRKTIYINDTVKVLKGPLEGREGVVRHMYKGTLFIYDENQEENSG 656
            IK  CVDKMFTA DR  K + INDTV VL+GP +G++GVV+H+Y G LFIY+E++ EN G
Sbjct: 477  IKKSCVDKMFTAVDRQNKIVSINDTVNVLEGPFQGKQGVVKHLYMGILFIYNESESENCG 536

Query: 655  IFCAKSDLCENITPPKDSSFRKGGNKSSSSFNQSPV---RSCEQEDSSYTFSRNRHSESN 485
             FCA+   CEN+   KD     GG+ + +  N  P+    S EQ +   T  R   S   
Sbjct: 537  FFCAQCGSCENVKKRKD----LGGSTTENLDNPFPMFAEPSYEQNEHRGT-ERPYRSTRE 591

Query: 484  QPFSIGQTLRIRKGPLKGYLCRVVRIYRSDVTVKLDSLVKVITVEEQFLSIPNIKRDFAA 305
            Q FSIGQ LRIRKGPLKGYLCRVVRI+R+DVTVKLDSL+K++TV+ +FLS+P  + D  +
Sbjct: 592  QLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPANRGDNLS 651

Query: 304  EMPSDIFGTQERFTGGLSGNGEQTVVTSSWDG-----ASSSWQALSTSTL 170
              P+  FG+Q+  T       E+T    SWD       S SWQ  S+STL
Sbjct: 652  GAPAGNFGSQD--TSFFGSEAEKT----SWDNGLPSFGSDSWQPFSSSTL 695