BLASTX nr result

ID: Ophiopogon26_contig00055970 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00055970
         (481 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|WP_084498289.1| fasciclin domain-containing protein [Pedobac...    54   9e-06

>ref|WP_084498289.1| fasciclin domain-containing protein [Pedobacter sp. V48]
 gb|ETZ22488.1| hypothetical protein N824_23800 [Pedobacter sp. V48]
          Length = 197

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 11  SADFAPFQKLFTAEGDKLKITAGNSCWMVDDAKILVPDVQAKNGVIFLIDRVL 169
           S+D     +L T +G K+K+T  N  W V+DAKI++PDV + NGV ++ID VL
Sbjct: 141 SSDLKNGMELATVQGQKIKLTEKNGEWWVNDAKIIIPDVISSNGVTYVIDGVL 193


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