BLASTX nr result

ID: Ophiopogon26_contig00055885 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00055885
         (439 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY13875.1| hypothetical protein RhiirB3_166256 [Rhizophagus ...    94   4e-22

>gb|PKY13875.1| hypothetical protein RhiirB3_166256 [Rhizophagus irregularis]
          Length = 90

 Score = 93.6 bits (231), Expect = 4e-22
 Identities = 52/79 (65%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -2

Query: 279 MSGRYQSLRRKSKLKFGSCCRGTK-VVKQFCYXXXXXXXXXXXPQKIYVLYVVLYWCINL 103
           MSGR    + K K+K  +CCRGTK VVKQFCY           P  IY+ YVVLYWCINL
Sbjct: 1   MSGR----KVKVKVKVWNCCRGTKKVVKQFCYLTLLNLNPPLLPPNIYI-YVVLYWCINL 55

Query: 102 LPFKITCITLLVYNSFQKT 46
           LPFKITCITLLVYNSFQKT
Sbjct: 56  LPFKITCITLLVYNSFQKT 74


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