BLASTX nr result
ID: Ophiopogon26_contig00055708
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00055708
(522 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKK78032.1| RCC1/BLIP-II, partial [Rhizophagus irregularis] 140 2e-35
gb|EXX59673.1| Srm1p [Rhizophagus irregularis DAOM 197198w] >gi|... 139 3e-35
gb|PKY47401.1| RCC1/BLIP-II [Rhizophagus irregularis] 138 1e-34
gb|PKK77043.1| RCC1/BLIP-II [Rhizophagus irregularis] 108 1e-24
gb|PKC63099.1| RCC1/BLIP-II [Rhizophagus irregularis] >gi|131728... 108 1e-24
gb|PKC00439.1| RCC1/BLIP-II [Rhizophagus irregularis] 108 1e-24
gb|EXX52782.1| Srm1p [Rhizophagus irregularis DAOM 197198w] >gi|... 108 2e-24
gb|POG65203.1| hypothetical protein GLOIN_2v1805204 [Rhizophagus... 108 3e-24
gb|PKY43598.1| RCC1/BLIP-II [Rhizophagus irregularis] 107 6e-24
gb|EXX72887.1| Srm1p [Rhizophagus irregularis DAOM 197198w] 89 6e-18
gb|EXX52899.1| Srm1p [Rhizophagus irregularis DAOM 197198w] 89 2e-17
dbj|GBC12482.1| Srm1p [Rhizophagus irregularis DAOM 181602] 89 2e-17
gb|PKY52941.1| hypothetical protein RhiirA4_470881 [Rhizophagus ... 72 4e-12
gb|POG74139.1| hypothetical protein GLOIN_2v1443060, partial [Rh... 55 7e-06
gb|PKY19519.1| RCC1/BLIP-II, partial [Rhizophagus irregularis] 55 7e-06
gb|PKK60823.1| RCC1/BLIP-II, partial [Rhizophagus irregularis] 55 7e-06
gb|PKC72586.1| RCC1/BLIP-II, partial [Rhizophagus irregularis] 55 7e-06
gb|PKC08628.1| RCC1/BLIP-II, partial [Rhizophagus irregularis] 55 7e-06
>gb|PKK78032.1| RCC1/BLIP-II, partial [Rhizophagus irregularis]
Length = 642
Score = 140 bits (352), Expect = 2e-35
Identities = 88/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 6 RRRSKKVKF------TQSTSHSRNVS-QQPSVATVQETLVASSXXXXXXXXXXXXXXXXX 164
RR SKKVKF T +S SRN QP ATVQE+ VASS
Sbjct: 113 RRTSKKVKFVLIDPTTSESSTSRNADLNQPYTATVQESQVASSVVIQETTIPQVTTTIIP 172
Query: 165 XXXXKKRGRPPKTTSTATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K K + A DSEL T T++ +S+KR V+ED++L LKPKRRKGDTF
Sbjct: 173 AMKSSK-----KRLTAAEDSELLTGS--TSSRRSRKRA---VEEDYKL-LKPKRRKGDTF 221
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
T+PIPTRSQQI +VY IGSN+FSQCG +G +N KK+ +I+ L++F +VD+SAGS+H AA
Sbjct: 222 TVPIPTRSQQIGQVYVIGSNEFSQCGMEGIENSKKLEYIKTLEEFKIVDVSAGSLHNAA 280
>gb|EXX59673.1| Srm1p [Rhizophagus irregularis DAOM 197198w]
dbj|GBC42441.1| Ran GDP/GTP exchange factor [Rhizophagus irregularis DAOM 181602]
gb|PKC00846.1| RCC1/BLIP-II [Rhizophagus irregularis]
gb|PKC62303.1| RCC1/BLIP-II [Rhizophagus irregularis]
gb|PKY29835.1| RCC1/BLIP-II [Rhizophagus irregularis]
gb|POG78932.1| hypothetical protein GLOIN_2v1533887 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 644
Score = 139 bits (351), Expect = 3e-35
Identities = 87/180 (48%), Positives = 113/180 (62%), Gaps = 8/180 (4%)
Frame = +3
Query: 6 RRRSKKVKF-------TQSTSHSRNVS-QQPSVATVQETLVASSXXXXXXXXXXXXXXXX 161
RR SKKVKF ++S++ SRN QP ATVQE+ VASS
Sbjct: 113 RRTSKKVKFVLIDPTTSESSTSSRNADLNQPYTATVQESQVASSVVIQETTIPQVTTTII 172
Query: 162 XXXXXKKRGRPPKTTSTATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDT 341
K K + A DSEL T T++ +S+KR V+ED++L LKPKRRKGDT
Sbjct: 173 PAMKSSK-----KRLTAAEDSELLTGS--TSSRRSRKRA---VEEDYKL-LKPKRRKGDT 221
Query: 342 FTIPIPTRSQQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
FT+PIPTRSQQI +VY IGSN+FSQCG +G +N KK+ +I+ L++F +VD+SAGS+H AA
Sbjct: 222 FTVPIPTRSQQIGQVYVIGSNEFSQCGMEGIENSKKLEYIKTLEEFKIVDVSAGSLHNAA 281
>gb|PKY47401.1| RCC1/BLIP-II [Rhizophagus irregularis]
Length = 644
Score = 138 bits (347), Expect = 1e-34
Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 8/180 (4%)
Frame = +3
Query: 6 RRRSKKVKF-------TQSTSHSRNVS-QQPSVATVQETLVASSXXXXXXXXXXXXXXXX 161
RR SKKVKF ++S++ SRN QP ATVQE+ VASS
Sbjct: 113 RRTSKKVKFVLIDPTTSESSTSSRNADLNQPYTATVQESQVASSVVIQETTIPQVTTTII 172
Query: 162 XXXXXKKRGRPPKTTSTATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDT 341
K K + DSEL T T++ +S+KR V+ED++L LKPKRRKGDT
Sbjct: 173 PAMKSSK-----KRLTATEDSELLTGS--TSSRRSRKRA---VEEDYKL-LKPKRRKGDT 221
Query: 342 FTIPIPTRSQQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
FT+PIPTRSQQI +VY IGSN+FSQCG +G +N KK+ +I+ L++F +VD+SAGS+H AA
Sbjct: 222 FTVPIPTRSQQIGQVYVIGSNEFSQCGMEGIENSKKLEYIKTLEEFKIVDVSAGSLHNAA 281
>gb|PKK77043.1| RCC1/BLIP-II [Rhizophagus irregularis]
Length = 464
Score = 108 bits (271), Expect = 1e-24
Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 KKRGRPPKTTST----ATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K+RGRPPK+ T AT+S T A + +KR + DH L+PKRRKGDTF
Sbjct: 8 KRRGRPPKSALTVILPATES--------TLARQPRKRENRA---DHGKILRPKRRKGDTF 56
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCG--DKGSDNLKKVSHIQALDQFDVVDISAGSIHGA 518
TIPIPTRSQ+I ++YAIGSN+ SQCG D K+S I +LD F++VDISAGS+H A
Sbjct: 57 TIPIPTRSQKIGRLYAIGSNELSQCGIEDSQVTEATKLSIISSLDNFNIVDISAGSLHNA 116
Query: 519 A 521
A
Sbjct: 117 A 117
>gb|PKC63099.1| RCC1/BLIP-II [Rhizophagus irregularis]
gb|PKY22014.1| RCC1/BLIP-II [Rhizophagus irregularis]
Length = 464
Score = 108 bits (271), Expect = 1e-24
Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 KKRGRPPKTTST----ATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K+RGRPPK+ T AT+S T A + +KR + DH L+PKRRKGDTF
Sbjct: 8 KRRGRPPKSALTVILPATES--------TLARQPRKRENRA---DHGKILRPKRRKGDTF 56
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCG--DKGSDNLKKVSHIQALDQFDVVDISAGSIHGA 518
TIPIPTRSQ+I ++YAIGSN+ SQCG D K+S I +LD F++VDISAGS+H A
Sbjct: 57 TIPIPTRSQKIGRLYAIGSNELSQCGIEDSQVTEATKLSIISSLDNFNIVDISAGSLHNA 116
Query: 519 A 521
A
Sbjct: 117 A 117
>gb|PKC00439.1| RCC1/BLIP-II [Rhizophagus irregularis]
Length = 464
Score = 108 bits (271), Expect = 1e-24
Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 KKRGRPPKTTST----ATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K+RGRPPK+ T AT+S T A + +KR + DH L+PKRRKGDTF
Sbjct: 8 KRRGRPPKSALTVILPATES--------TLARQPRKRENRA---DHGKILRPKRRKGDTF 56
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCG--DKGSDNLKKVSHIQALDQFDVVDISAGSIHGA 518
TIPIPTRSQ+I ++YAIGSN+ SQCG D K+S I +LD F++VDISAGS+H A
Sbjct: 57 TIPIPTRSQKIGRLYAIGSNELSQCGIEDSQVTEATKLSIISSLDNFNIVDISAGSLHNA 116
Query: 519 A 521
A
Sbjct: 117 A 117
>gb|EXX52782.1| Srm1p [Rhizophagus irregularis DAOM 197198w]
dbj|GBC52502.1| Regulator of chromosome condensation [Rhizophagus irregularis DAOM
181602]
Length = 621
Score = 108 bits (271), Expect = 2e-24
Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 KKRGRPPKTTST----ATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K+RGRPPK+ T AT+S T A + +KR + DH L+PKRRKGDTF
Sbjct: 165 KRRGRPPKSALTVILPATES--------TLARQPRKRENRA---DHGKILRPKRRKGDTF 213
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCG--DKGSDNLKKVSHIQALDQFDVVDISAGSIHGA 518
TIPIPTRSQ+I ++YAIGSN+ SQCG D K+S I +LD F++VDISAGS+H A
Sbjct: 214 TIPIPTRSQKIGRLYAIGSNELSQCGIEDSQVTEATKLSIISSLDNFNIVDISAGSLHNA 273
Query: 519 A 521
A
Sbjct: 274 A 274
>gb|POG65203.1| hypothetical protein GLOIN_2v1805204 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 1052
Score = 108 bits (271), Expect = 3e-24
Identities = 64/121 (52%), Positives = 80/121 (66%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 KKRGRPPKTTST----ATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K+RGRPPK+ T AT+S T A + +KR + DH L+PKRRKGDTF
Sbjct: 165 KRRGRPPKSALTVILPATES--------TLARQPRKRENRA---DHGKILRPKRRKGDTF 213
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCG--DKGSDNLKKVSHIQALDQFDVVDISAGSIHGA 518
TIPIPTRSQ+I ++YAIGSN+ SQCG D K+S I +LD F++VDISAGS+H A
Sbjct: 214 TIPIPTRSQKIGRLYAIGSNELSQCGIEDSQVTEATKLSIISSLDNFNIVDISAGSLHNA 273
Query: 519 A 521
A
Sbjct: 274 A 274
>gb|PKY43598.1| RCC1/BLIP-II [Rhizophagus irregularis]
Length = 467
Score = 107 bits (266), Expect = 6e-24
Identities = 63/121 (52%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
Frame = +3
Query: 177 KKRGRPPKTTST----ATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTF 344
K+RGRPPK+ T AT+S T A + +KR + DH L+PKRRKGDTF
Sbjct: 11 KRRGRPPKSALTVILPATES--------TLARQPRKRENRA---DHGKILRPKRRKGDTF 59
Query: 345 TIPIPTRSQQICKVYAIGSNDFSQCG--DKGSDNLKKVSHIQALDQFDVVDISAGSIHGA 518
IPIPTRSQ+I ++YAIGSN+ SQCG D K+S I +LD F++VDISAGS+H A
Sbjct: 60 AIPIPTRSQKIGRLYAIGSNELSQCGIEDSQVTEATKLSIISSLDNFNIVDISAGSLHNA 119
Query: 519 A 521
A
Sbjct: 120 A 120
>gb|EXX72887.1| Srm1p [Rhizophagus irregularis DAOM 197198w]
Length = 340
Score = 89.4 bits (220), Expect = 6e-18
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +3
Query: 264 SKKRGHYVVDEDHRLTLKPKRRKGDTFTIPIPTRSQQICKVYAIGSNDFSQCGDKGSDNL 443
++KRG+ VV++D+ L KRRK +TF +PIPT ++I +VYAIGSND SQCG +
Sbjct: 168 TRKRGNNVVEDDNTQILNSKRRKWNTFIVPIPTLPKRIGQVYAIGSNDMSQCGGIKESEI 227
Query: 444 KKVSHIQALDQFDVVDISAGSIHGAA 521
KK+S I L++F++VDISAG++H AA
Sbjct: 228 KKLS-IIPLEKFNIVDISAGALHSAA 252
>gb|EXX52899.1| Srm1p [Rhizophagus irregularis DAOM 197198w]
Length = 589
Score = 89.4 bits (220), Expect = 2e-17
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +3
Query: 264 SKKRGHYVVDEDHRLTLKPKRRKGDTFTIPIPTRSQQICKVYAIGSNDFSQCGDKGSDNL 443
++KRG+ VV++D+ L KRRK +TF +PIPT ++I +VYAIGSND SQCG +
Sbjct: 168 TRKRGNNVVEDDNTQILNSKRRKWNTFIVPIPTLPKRIGQVYAIGSNDMSQCGGIKESEI 227
Query: 444 KKVSHIQALDQFDVVDISAGSIHGAA 521
KK+S I L++F++VDISAG++H AA
Sbjct: 228 KKLS-IIPLEKFNIVDISAGALHSAA 252
>dbj|GBC12482.1| Srm1p [Rhizophagus irregularis DAOM 181602]
Length = 595
Score = 89.4 bits (220), Expect = 2e-17
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +3
Query: 264 SKKRGHYVVDEDHRLTLKPKRRKGDTFTIPIPTRSQQICKVYAIGSNDFSQCGDKGSDNL 443
++KRG+ VV++D+ L KRRK +TF +PIPT ++I +VYAIGSND SQCG +
Sbjct: 168 TRKRGNNVVEDDNTQILNSKRRKWNTFIVPIPTLPKRIGQVYAIGSNDMSQCGGIKESEI 227
Query: 444 KKVSHIQALDQFDVVDISAGSIHGAA 521
KK+S I L++F++VDISAG++H AA
Sbjct: 228 KKLS-IIPLEKFNIVDISAGALHSAA 252
>gb|PKY52941.1| hypothetical protein RhiirA4_470881 [Rhizophagus irregularis]
Length = 225
Score = 72.0 bits (175), Expect = 4e-12
Identities = 45/108 (41%), Positives = 60/108 (55%)
Frame = +3
Query: 198 KTTSTATDSELSTDGNLTAAEKSKKRGHYVVDEDHRLTLKPKRRKGDTFTIPIPTRSQQI 377
K S E ++D N+ K +KRG+ VV++D+ L KRRK +TF +PIPT ++I
Sbjct: 131 KVVSVELYKEGTSDRNIDKRLK-QKRGNNVVEDDNTQILNAKRRKWNTFIVPIPTFPKRI 189
Query: 378 CKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
+VYAIGSND SQCG VDISAG++H AA
Sbjct: 190 GQVYAIGSNDMSQCG---------------------VDISAGALHSAA 216
>gb|POG74139.1| hypothetical protein GLOIN_2v1443060, partial [Rhizophagus
irregularis DAOM 181602=DAOM 197198]
Length = 325
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 369 QQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
++I +VYAIGSND SQCG +KK+S I L++F++VDISAG++H AA
Sbjct: 2 KRIGQVYAIGSNDMSQCGGIKESEIKKLS-IIPLEKFNIVDISAGALHSAA 51
>gb|PKY19519.1| RCC1/BLIP-II, partial [Rhizophagus irregularis]
Length = 325
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 369 QQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
++I +VYAIGSND SQCG +KK+S I L++F++VDISAG++H AA
Sbjct: 2 KRIGQVYAIGSNDMSQCGGIKESEIKKLS-IIPLEKFNIVDISAGALHSAA 51
>gb|PKK60823.1| RCC1/BLIP-II, partial [Rhizophagus irregularis]
Length = 325
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 369 QQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
++I +VYAIGSND SQCG +KK+S I L++F++VDISAG++H AA
Sbjct: 2 KRIGQVYAIGSNDMSQCGGIKESEIKKLS-IIPLEKFNIVDISAGALHSAA 51
>gb|PKC72586.1| RCC1/BLIP-II, partial [Rhizophagus irregularis]
Length = 325
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 369 QQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
++I +VYAIGSND SQCG +KK+S I L++F++VDISAG++H AA
Sbjct: 2 KRIGQVYAIGSNDMSQCGGIKESEIKKLS-IIPLEKFNIVDISAGALHSAA 51
>gb|PKC08628.1| RCC1/BLIP-II, partial [Rhizophagus irregularis]
Length = 325
Score = 55.5 bits (132), Expect = 7e-06
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +3
Query: 369 QQICKVYAIGSNDFSQCGDKGSDNLKKVSHIQALDQFDVVDISAGSIHGAA 521
++I +VYAIGSND SQCG +KK+S I L++F++VDISAG++H AA
Sbjct: 2 KRIGQVYAIGSNDMSQCGGIKESEIKKLS-IIPLEKFNIVDISAGALHSAA 51