BLASTX nr result

ID: Ophiopogon26_contig00055614 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00055614
         (365 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC56605.1| hypothetical protein RhiirA1_473753 [Rhizophagus ...    58   3e-07

>gb|PKC56605.1| hypothetical protein RhiirA1_473753 [Rhizophagus irregularis]
          Length = 520

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 30/66 (45%), Positives = 45/66 (68%)
 Frame = +2

Query: 17  DEIDTFFQSPPDLYKEVKTMSKKRRSMRYTGITKGAKRNRPSNQNDIVDADQSASDQSEN 196
           DEID FF+ PP++ K+ K  S+KR SM+ TG +K  KRN+ S  ND  DA+Q+  D+S+ 
Sbjct: 236 DEIDDFFRGPPNVVKDAKLKSRKRGSMKGTG-SKSVKRNKSS--NDAEDAEQTTCDESDV 292

Query: 197 VDKSTD 214
            + +T+
Sbjct: 293 EENTTE 298


Top