BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00055571
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX75583.1| Rpc40p [Rhizophagus irregularis DAOM 197198w] >gi...    95   1e-35
gb|PKY50270.1| DNA-directed RNA polymerase III subunit C5 [Rhizo...    83   4e-25
gb|EXX75584.1| Rpc40p [Rhizophagus irregularis DAOM 197198w]           76   7e-14
emb|SAM07266.1| hypothetical protein [Absidia glauca]                  64   8e-14
emb|CDH56512.1| dna-directed rna polymerases i and iii subunitrp...    66   1e-13
emb|CDS12355.1| hypothetical protein LRAMOSA04550 [Lichtheimia r...    65   1e-13
dbj|GAN11679.1| DNA-directed RNA polymerases I and III subunit R...    66   2e-13
gb|EPB89599.1| DNA-directed RNA polymerase I and III subunit RPA...    66   2e-13
gb|OBZ89736.1| DNA-directed RNA polymerases I and III subunit RP...    67   2e-13
gb|OAD03426.1| hypothetical protein MUCCIDRAFT_110287 [Mucor cir...    66   2e-13
emb|CEI87535.1| Putative DNA-directed RNA polymerase I and III s...    66   4e-13
ref|XP_023463011.1| hypothetical protein RHIMIDRAFT_50449 [Rhizo...    66   4e-13
gb|ORE19354.1| hypothetical protein BCV71DRAFT_242887 [Rhizopus ...    66   4e-13
emb|CEG78920.1| Putative DNA-directed RNA polymerase I and III s...    66   4e-13
gb|ORZ00813.1| DNA-directed RNA polymerase [Syncephalastrum race...    62   5e-13
gb|ORX98974.1| DNA-directed RNA polymerases I and III subunit RP...    61   5e-13
gb|ORZ18964.1| DNA-directed RNA polymerase [Absidia repens]            63   6e-13
gb|KXJ14474.1| DNA-directed RNA polymerases I and III subunit RP...    72   1e-12
ref|XP_020900201.1| DNA-directed RNA polymerases I and III subun...    72   2e-12
ref|XP_015769303.1| PREDICTED: DNA-directed RNA polymerases I an...    69   4e-12

>gb|EXX75583.1| Rpc40p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC44277.1| DNA-directed RNA polymerase I and III subunit [Rhizophagus
           irregularis DAOM 181602]
 gb|PKC12973.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Rhizophagus
           irregularis]
 gb|PKC70567.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Rhizophagus
           irregularis]
 gb|PKK67678.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Rhizophagus
           irregularis]
 gb|PKY17272.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Rhizophagus
           irregularis]
 gb|POG83279.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Rhizophagus
           irregularis DAOM 181602=DAOM 197198]
          Length = 371

 Score = 94.7 bits (234), Expect(2) = 1e-35
 Identities = 44/45 (97%), Positives = 45/45 (100%)
 Frame = +1

Query: 55  RDHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHDLIERLRN 189
           RDHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHDL+ERLRN
Sbjct: 11  RDHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHDLVERLRN 55



 Score = 82.8 bits (203), Expect(2) = 1e-35
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT
Sbjct: 66  QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 106


>gb|PKY50270.1| DNA-directed RNA polymerase III subunit C5 [Rhizophagus
           irregularis]
          Length = 356

 Score = 82.8 bits (203), Expect(2) = 4e-25
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT
Sbjct: 51  QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 91



 Score = 59.7 bits (143), Expect(2) = 4e-25
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = +1

Query: 97  RDHVSSISSSDFPFHTSNRYPDHDLIERLRN 189
           RDH+  ISSSDFPFHTSNRYPDHDL+ERLRN
Sbjct: 11  RDHLE-ISSSDFPFHTSNRYPDHDLVERLRN 40


>gb|EXX75584.1| Rpc40p [Rhizophagus irregularis DAOM 197198w]
          Length = 303

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +3

Query: 246 MEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           MEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT
Sbjct: 1   MEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 38


>emb|SAM07266.1| hypothetical protein [Absidia glauca]
          Length = 351

 Score = 64.3 bits (155), Expect(2) = 8e-14
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           Q+ +EFD+IGVDAS+ANA RRI+IAEVPTMAIE V++ +NT
Sbjct: 62  QHSIEFDLIGVDASVANAFRRILIAEVPTMAIEHVYVMNNT 102



 Score = 40.0 bits (92), Expect(2) = 8e-14
 Identities = 18/34 (52%), Positives = 28/34 (82%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYP 159
           D++E+L+TRV+VERD V+S+S SD+P    ++YP
Sbjct: 9   DNVELLRTRVLVERDRVTSVSGSDYP----HQYP 38


>emb|CDH56512.1| dna-directed rna polymerases i and iii subunitrpac1 [Lichtheimia
           corymbifera JMRC:FSU:9682]
          Length = 352

 Score = 65.9 bits (159), Expect(2) = 1e-13
 Identities = 30/39 (76%), Positives = 37/39 (94%)
 Frame = +3

Query: 243 DMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           +MEFD++GVDASIANA RRI+IAEVPTMAIEKV++ +NT
Sbjct: 63  NMEFDLVGVDASIANAFRRILIAEVPTMAIEKVYVLNNT 101



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 18/37 (48%), Positives = 28/37 (75%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRVV+ERD V S+S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVVLERDRVFSVSGSDYP----HQYPGID 40


>emb|CDS12355.1| hypothetical protein LRAMOSA04550 [Lichtheimia ramosa]
          Length = 352

 Score = 65.5 bits (158), Expect(2) = 1e-13
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = +3

Query: 246 MEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           MEFD++GVDASIANA RRI+IAEVPTMAIEKV++ +NT
Sbjct: 64  MEFDLVGVDASIANAFRRILIAEVPTMAIEKVYVLNNT 101



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 18/37 (48%), Positives = 28/37 (75%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRVV+ERD V S+S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVVLERDRVFSVSGSDYP----HQYPGID 40


>dbj|GAN11679.1| DNA-directed RNA polymerases I and III subunit RPAC1-like [Mucor
           ambiguus]
          Length = 351

 Score = 66.2 bits (160), Expect(2) = 2e-13
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 37.0 bits (84), Expect(2) = 2e-13
 Identities = 15/26 (57%), Positives = 23/26 (88%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFP 135
           +++E+L+TRVVVE+D V S+S SD+P
Sbjct: 8   ENVELLRTRVVVEKDRVYSVSGSDYP 33


>gb|EPB89599.1| DNA-directed RNA polymerase I and III subunit RPAC1 [Mucor
           circinelloides f. circinelloides 1006PhL]
          Length = 351

 Score = 66.2 bits (160), Expect(2) = 2e-13
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 37.0 bits (84), Expect(2) = 2e-13
 Identities = 15/26 (57%), Positives = 23/26 (88%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFP 135
           +++E+L+TRVVVE+D V S+S SD+P
Sbjct: 8   ENVELLRTRVVVEKDRVYSVSGSDYP 33


>gb|OBZ89736.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Choanephora
           cucurbitarum]
          Length = 350

 Score = 66.6 bits (161), Expect(2) = 2e-13
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IGVDASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGVDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 36.6 bits (83), Expect(2) = 2e-13
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRVVVE+D V S S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVVVEKDRVYSASGSDYP----HQYPGID 40


>gb|OAD03426.1| hypothetical protein MUCCIDRAFT_110287 [Mucor circinelloides f.
           lusitanicus CBS 277.49]
          Length = 351

 Score = 65.9 bits (159), Expect(2) = 2e-13
 Identities = 29/41 (70%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DAS+ANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASVANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 37.0 bits (84), Expect(2) = 2e-13
 Identities = 15/26 (57%), Positives = 23/26 (88%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFP 135
           +++E+L+TRVVVE+D V S+S SD+P
Sbjct: 8   ENVELLRTRVVVEKDRVYSVSGSDYP 33


>emb|CEI87535.1| Putative DNA-directed RNA polymerase I and III subunit RPAC1
           [Rhizopus microsporus]
          Length = 351

 Score = 66.2 bits (160), Expect(2) = 4e-13
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 35.8 bits (81), Expect(2) = 4e-13
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRV++E+D V S S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVIIEKDRVYSTSGSDYP----HQYPGID 40


>ref|XP_023463011.1| hypothetical protein RHIMIDRAFT_50449 [Rhizopus microsporus ATCC
           52813]
 emb|CEG64284.1| Putative DNA-directed RNA polymerase I and III subunit RPAC1
           [Rhizopus microsporus]
 gb|ORE02742.1| hypothetical protein BCV72DRAFT_44793 [Rhizopus microsporus var.
           microsporus]
 gb|PHZ09303.1| hypothetical protein RHIMIDRAFT_50449 [Rhizopus microsporus ATCC
           52813]
          Length = 351

 Score = 66.2 bits (160), Expect(2) = 4e-13
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 35.8 bits (81), Expect(2) = 4e-13
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRV++E+D V S S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVIIEKDRVYSASGSDYP----HQYPGID 40


>gb|ORE19354.1| hypothetical protein BCV71DRAFT_242887 [Rhizopus microsporus]
          Length = 256

 Score = 66.2 bits (160), Expect(2) = 4e-13
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 35.8 bits (81), Expect(2) = 4e-13
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRV++E+D V S S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVIIEKDRVYSTSGSDYP----HQYPGID 40


>emb|CEG78920.1| Putative DNA-directed RNA polymerase I and III subunit RPAC1
           [Rhizopus microsporus]
          Length = 180

 Score = 66.2 bits (160), Expect(2) = 4e-13
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IG+DASIANA RRIMIAEVPTMAIEKV++ +NT
Sbjct: 61  KHSVEFDLIGIDASIANAFRRIMIAEVPTMAIEKVYVMNNT 101



 Score = 35.8 bits (81), Expect(2) = 4e-13
 Identities = 16/37 (43%), Positives = 27/37 (72%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYPDHD 168
           +++E+L+TRV++E+D V S S SD+P    ++YP  D
Sbjct: 8   ENVELLRTRVIIEKDRVYSASGSDYP----HQYPGID 40


>gb|ORZ00813.1| DNA-directed RNA polymerase [Syncephalastrum racemosum]
          Length = 346

 Score = 61.6 bits (148), Expect(2) = 5e-13
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           Q+ +EFD+IGVDASIANA RRI+IAEV TMAIE V++ +NT
Sbjct: 61  QHSIEFDLIGVDASIANAFRRILIAEVATMAIETVYVVNNT 101



 Score = 40.0 bits (92), Expect(2) = 5e-13
 Identities = 18/34 (52%), Positives = 27/34 (79%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYP 159
           D++E+L+TRV+VERD V S+S SD+P    ++YP
Sbjct: 8   DNVELLRTRVIVERDRVHSVSGSDYP----HQYP 37


>gb|ORX98974.1| DNA-directed RNA polymerases I and III subunit RPAC1-like protein
           [Basidiobolus meristosporus CBS 931.73]
          Length = 336

 Score = 61.2 bits (147), Expect(2) = 5e-13
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = +3

Query: 243 DMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           +MEFD++GVDASIANA RRI+I+EVPTMA+E V+  +NT
Sbjct: 57  EMEFDLVGVDASIANAFRRILISEVPTMAVEHVYFMNNT 95



 Score = 40.4 bits (93), Expect(2) = 5e-13
 Identities = 15/26 (57%), Positives = 25/26 (96%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFP 135
           D+ E+L++RV++E+DHV+++SSSDFP
Sbjct: 2   DNTELLRSRVILEKDHVNNVSSSDFP 27


>gb|ORZ18964.1| DNA-directed RNA polymerase [Absidia repens]
          Length = 350

 Score = 62.8 bits (151), Expect(2) = 6e-13
 Identities = 28/41 (68%), Positives = 37/41 (90%)
 Frame = +3

Query: 237 QYDMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           ++ +EFD+IGVDAS+ANA RRI+IAEVPTMAIE V++ +NT
Sbjct: 61  KHSIEFDLIGVDASVANAFRRILIAEVPTMAIEHVYVMNNT 101



 Score = 38.5 bits (88), Expect(2) = 6e-13
 Identities = 17/34 (50%), Positives = 28/34 (82%)
 Frame = +1

Query: 58  DHLEILQTRVVVERDHVSSISSSDFPFHTSNRYP 159
           D++E+L++RV+VERD V+S+S SD+P    ++YP
Sbjct: 8   DNVELLRSRVLVERDRVTSVSGSDYP----HQYP 37


>gb|KXJ14474.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Exaiptasia
           pallida]
          Length = 248

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 34/39 (87%), Positives = 38/39 (97%)
 Frame = +3

Query: 243 DMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           DMEFD+IGVDASIANA RRI++AEVPTMAIEKVFIY+NT
Sbjct: 57  DMEFDMIGVDASIANAFRRILLAEVPTMAIEKVFIYNNT 95


>ref|XP_020900201.1| DNA-directed RNA polymerases I and III subunit RPAC1-like
           [Exaiptasia pallida]
          Length = 258

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 34/39 (87%), Positives = 38/39 (97%)
 Frame = +3

Query: 243 DMEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           DMEFD+IGVDASIANA RRI++AEVPTMAIEKVFIY+NT
Sbjct: 57  DMEFDMIGVDASIANAFRRILLAEVPTMAIEKVFIYNNT 95


>ref|XP_015769303.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC1-like, partial [Acropora digitifera]
          Length = 189

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 32/38 (84%), Positives = 38/38 (100%)
 Frame = +3

Query: 246 MEFDIIGVDASIANALRRIMIAEVPTMAIEKVFIYDNT 359
           MEFD++GVDA+IANALRRI++AEVPTMAIEKVFIY+NT
Sbjct: 58  MEFDMVGVDAAIANALRRILLAEVPTMAIEKVFIYNNT 95