BLASTX nr result

ID: Ophiopogon26_contig00054944 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054944
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...   100   3e-21
ref|XP_020272188.1| uncharacterized protein LOC109847370 [Aspara...    76   6e-13
gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officin...    70   4e-12
gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagu...    58   6e-07
gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagu...    59   7e-07
gb|ABD63192.1| Reverse transcriptase family protein [Asparagus o...    58   2e-06
gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagu...    57   2e-06

>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score =  100 bits (248), Expect = 3e-21
 Identities = 56/122 (45%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = +3

Query: 153 VKSSFVVFEGPSEASGAFFKVPAKHSKQKSIIFXXXXXXXXXXXXXXXXXXXX*FSHYGL 332
           +KSSF   E   +A  AF+KVP+K   QK I F                     F ++  
Sbjct: 415 IKSSFTSNEEVEDAQKAFYKVPSKRKGQKLIQFGRVKPEQLKRGSSEEDDGVPQFHYHEP 474

Query: 333 KSRRMMEKMGYDFKIQGGLNFGKGRRTLLR-SFVPEGKVPDYYHKTRRGLGYVTTPLSSD 509
            S ++M++MGY+F  + GLNFGKGRRT +R S  PEGK  DYYHKTR GLGYVTTP +S+
Sbjct: 475 NSIQLMKRMGYNFNEKRGLNFGKGRRTPVRMSLAPEGKPQDYYHKTRSGLGYVTTPSASE 534

Query: 510 SE 515
            E
Sbjct: 535 DE 536


>ref|XP_020272188.1| uncharacterized protein LOC109847370 [Asparagus officinalis]
          Length = 611

 Score = 76.3 bits (186), Expect = 6e-13
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = +3

Query: 339 RRMMEKMGYDFKIQGGLNFGKGRRTLLRSFVPEGKVPDYYHKTRRGLGYVTTPL 500
           RR+M+K+GY F   GGLNFGKG+RT L  FVP+GK  +YY KTR+GLGYV+ PL
Sbjct: 2   RRIMQKIGYYFSNAGGLNFGKGQRTPLAPFVPKGKPDNYYDKTRKGLGYVSPPL 55


>gb|ABD63088.1| hypothetical protein 17.t00015 [Asparagus officinalis]
          Length = 125

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +3

Query: 345 MMEKMGYDFKIQGGLNFGKGRRTLLRS-FVPEGKVPDYYHKTRRGLGYVTTPL 500
           +M+K+GYDF  + GLNFGKGR+  ++  +VPEGK  DYYHKT RGLGY + PL
Sbjct: 4   LMKKIGYDFTRKEGLNFGKGRKIPIKHVYVPEGKPEDYYHKTHRGLGYESPPL 56


>gb|ONK60601.1| uncharacterized protein A4U43_C08F20340 [Asparagus officinalis]
          Length = 254

 Score = 58.2 bits (139), Expect = 6e-07
 Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 324 YGLKSRRMMEKMGYDFKIQGGLNFGKGRRTLLR-SFVPEGKVPDYYHKTRRGLGYVTTPL 500
           Y  K+R ++EK GYDF +  GL FG+G R   R ++VP+GK PD Y++ +RGLGYV+   
Sbjct: 81  YDAKARDLVEKYGYDFTLGEGLFFGRGPRVPPRLAYVPKGK-PDDYYRHKRGLGYVS--- 136

Query: 501 SSDSE 515
           SSD E
Sbjct: 137 SSDDE 141


>gb|ONK57060.1| uncharacterized protein A4U43_C10F16200 [Asparagus officinalis]
          Length = 427

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 28/56 (50%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
 Frame = +3

Query: 345 MMEKMGYDFKIQGGLNFGKGRRTLLR-SFVPEGKVPDYYHKTRRGLGYVTTPLSSD 509
           MM  MGYD     GLN+G+GR+T+++ ++VP+GK  +Y+++TRRGLGY ++  SSD
Sbjct: 1   MMSDMGYDLTRLEGLNYGRGRKTVIKPAYVPKGKPSNYFNRTRRGLGYSSS--SSD 54


>gb|ABD63192.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1146

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)
 Frame = +3

Query: 135 PHILPYVKSSFVVFEGPSEASGAFFKVPAKHSKQKSIIFXXXXXXXXXXXXXXXXXXXX* 314
           P++   ++SS++  +    + G    +P K   Q+ +++                     
Sbjct: 235 PNLYAPLRSSYITKKRLQHSFGTTLVIPTKIGGQREVVYGKGEGFPLPDHFLREDENDDK 294

Query: 315 ----FSHYGLKSRRMMEKMGYDFKIQGGLNFGKGRRTLLR-SFVPEGKVPDYYHKTRRGL 479
                S Y  ++R++MEK GYDF +  GL F +G R   + ++VP+GK PD Y+K RRGL
Sbjct: 295 PGRHLSKYSPEARKLMEKQGYDFTLGEGLYFDRGPRIPAKAAYVPKGK-PDDYYKFRRGL 353

Query: 480 GYVTTPLSSDSEPE 521
           GY      S SE E
Sbjct: 354 GY-----ESSSEDE 362


>gb|ONK72915.1| uncharacterized protein A4U43_C04F24880 [Asparagus officinalis]
          Length = 1510

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
 Frame = +3

Query: 135  PHILPYVKSSFVVFEGPSEASGAFFKVPAKHSKQKSIIFXXXXXXXXXXXXXXXXXXXX* 314
            P +   ++SS+V  E    + G    +P K    K +I+                     
Sbjct: 1098 PELYMPIRSSYVTKEHLQHSFGTTMVIPNKVRGAKEVIYGKGKSSPLPDHFLSEDEDDDK 1157

Query: 315  ----FSHYGLKSRRMMEKMGYDFKIQGGLNFGKGRRTLLRS-FVPEGKVPDYYHKTRRGL 479
                 S Y  ++R++MEK GYDF +  GL F +G R   ++ +VP+GK  DYY K  RGL
Sbjct: 1158 PGRHLSKYSPEARKLMEKQGYDFTLGEGLYFDRGPRNPAKAVYVPKGKPEDYY-KYGRGL 1216

Query: 480  GYVTTPLSSDSE 515
            GYV    SSD E
Sbjct: 1217 GYV----SSDDE 1224


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