BLASTX nr result

ID: Ophiopogon26_contig00054862 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054862
         (373 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POG67890.1| hypothetical protein GLOIN_2v266175 [Rhizophagus ...   104   6e-24
dbj|GBC12920.1| Glutamate dehydrogenase NAD(P)+ [Rhizophagus irr...   104   7e-24
gb|PKC11965.1| 30S ribosomal protein S12 [Rhizophagus irregulari...    53   3e-06
gb|EXX71071.1| hypothetical protein RirG_081720 [Rhizophagus irr...    53   7e-06

>gb|POG67890.1| hypothetical protein GLOIN_2v266175 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 445

 Score =  104 bits (260), Expect = 6e-24
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +3

Query: 216 MSSNLIKPSILSHSPKSFISVLKSHGITKFHLHFNRKTSRVIASHPILQPIG 371
           MSSNLIKPSILSHSPKSFISVLKSHGITKFHLHFNRKT RVIASHPILQPIG
Sbjct: 1   MSSNLIKPSILSHSPKSFISVLKSHGITKFHLHFNRKTRRVIASHPILQPIG 52


>dbj|GBC12920.1| Glutamate dehydrogenase NAD(P)+ [Rhizophagus irregularis DAOM
           181602]
          Length = 460

 Score =  104 bits (260), Expect = 7e-24
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +3

Query: 216 MSSNLIKPSILSHSPKSFISVLKSHGITKFHLHFNRKTSRVIASHPILQPIG 371
           MSSNLIKPSILSHSPKSFISVLKSHGITKFHLHFNRKT RVIASHPILQPIG
Sbjct: 1   MSSNLIKPSILSHSPKSFISVLKSHGITKFHLHFNRKTRRVIASHPILQPIG 52


>gb|PKC11965.1| 30S ribosomal protein S12 [Rhizophagus irregularis]
 gb|PKC60025.1| 30S ribosomal protein S12 [Rhizophagus irregularis]
 gb|PKK65853.1| 30S ribosomal protein S12 [Rhizophagus irregularis]
 gb|PKY28644.1| 30S ribosomal protein S12 [Rhizophagus irregularis]
 gb|PKY45369.1| 30S ribosomal protein S12 [Rhizophagus irregularis]
 gb|POG67891.1| 30S ribosomal protein S12 [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 120

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   DFAGVPNRTTSRSKYGTKKPKAPTK 75
           DFAGVPNRTTSRSKYGTKKPKA TK
Sbjct: 96  DFAGVPNRTTSRSKYGTKKPKATTK 120


>gb|EXX71071.1| hypothetical protein RirG_081720 [Rhizophagus irregularis DAOM
           197198w]
 gb|EXX71072.1| hypothetical protein RirG_081720 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC12921.1| Putative mitochondrial 37S ribosomal protein MRPS12 [Rhizophagus
           irregularis DAOM 181602]
          Length = 165

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +1

Query: 1   DFAGVPNRTTSRSKYGTKKPKAPTK 75
           DFAGVPNRTTSRSKYGTKKPKA TK
Sbjct: 141 DFAGVPNRTTSRSKYGTKKPKATTK 165


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