BLASTX nr result

ID: Ophiopogon26_contig00054712 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054712
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC39732.1| hypothetical protein RIR_2342600 [Rhizophagus ir...    58   7e-14

>dbj|GBC39732.1| hypothetical protein RIR_2342600 [Rhizophagus irregularis DAOM
           181602]
          Length = 93

 Score = 57.8 bits (138), Expect(3) = 7e-14
 Identities = 28/42 (66%), Positives = 30/42 (71%)
 Frame = +2

Query: 281 FGRNDRMXXXXXXXEAISVCSERDEVLIDEFYLRRFGNIGLS 406
           FGRND M       EAI+VC E DE LIDEFYL+RFGNIG S
Sbjct: 38  FGRNDGMLLLLHLLEAINVCFEHDEALIDEFYLQRFGNIGWS 79



 Score = 45.1 bits (105), Expect(3) = 7e-14
 Identities = 31/66 (46%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
 Frame = +3

Query: 105 FLDKNGRAFHCIMDFIGMVRFI*FARS*WRTSGN*TGTRIKN*LFQIQIKDLIIMHLLIL 284
           FLDKNGRAFHCIMDFI M                            IQIK L IMHLLI 
Sbjct: 7   FLDKNGRAFHCIMDFIVM----------------------------IQIKGLTIMHLLIF 38

Query: 285 ---DGM 293
              DGM
Sbjct: 39  GRNDGM 44



 Score = 21.6 bits (44), Expect(3) = 7e-14
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +1

Query: 409 MFLTNQYVKSLD 444
           M  TNQYVKSL+
Sbjct: 81  MISTNQYVKSLN 92


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