BLASTX nr result

ID: Ophiopogon26_contig00054552 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054552
         (446 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY37666.1| hypothetical protein RhiirA4_253594 [Rhizophagus ...    50   4e-06

>gb|PKY37666.1| hypothetical protein RhiirA4_253594 [Rhizophagus irregularis]
          Length = 103

 Score = 50.1 bits (118), Expect(2) = 4e-06
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = -1

Query: 308 YVVTYNRNKPNDSCSYVTTSNHN 240
           +V+TYNRNKPNDSCSYV TSNHN
Sbjct: 66  HVITYNRNKPNDSCSYVITSNHN 88



 Score = 28.5 bits (62), Expect(2) = 4e-06
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = -2

Query: 226 LQPANDTTMLPQD 188
           ++PANDTTMLPQD
Sbjct: 90  VKPANDTTMLPQD 102


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