BLASTX nr result

ID: Ophiopogon26_contig00054489 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054489
         (517 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC42427.1| RAD50-like DNA repair protein [Rhizophagus irreg...   303   5e-93
gb|EXX69025.1| Rad50p [Rhizophagus irregularis DAOM 197198w]          303   6e-93
gb|PKK75174.1| P-loop containing nucleoside triphosphate hydrola...   302   1e-92

>dbj|GBC42427.1| RAD50-like DNA repair protein [Rhizophagus irregularis DAOM 181602]
          Length = 1273

 Score =  303 bits (777), Expect = 5e-93
 Identities = 159/172 (92%), Positives = 161/172 (93%)
 Frame = -1

Query: 517 LRSKFSSLKHTRDSTTKAKESNIVKKSKFEKEIDRMELLSESDLITLNTXXXXXXXXXXE 338
           LRSKFSSLKHTRDSTTKAKESNIVKKSK EKEIDRMELLSESDLITLNT          E
Sbjct: 408 LRSKFSSLKHTRDSTTKAKESNIVKKSKLEKEIDRMELLSESDLITLNTSLEEVESEIEE 467

Query: 337 FVQDDLINKITSSIEAKQKEYKELDKKLTRLQELTTNQAKLEYKRTEKHKKASMIQTTWE 158
           FVQDDLINKITSSI+AKQKEYKELDKKLTRLQELTTNQAKLEYKR+EKHKKASMIQTTWE
Sbjct: 468 FVQDDLINKITSSIDAKQKEYKELDKKLTRLQELTTNQAKLEYKRSEKHKKASMIQTTWE 527

Query: 157 LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK 2
           LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK
Sbjct: 528 LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK 579


>gb|EXX69025.1| Rad50p [Rhizophagus irregularis DAOM 197198w]
          Length = 1297

 Score =  303 bits (777), Expect = 6e-93
 Identities = 159/172 (92%), Positives = 161/172 (93%)
 Frame = -1

Query: 517 LRSKFSSLKHTRDSTTKAKESNIVKKSKFEKEIDRMELLSESDLITLNTXXXXXXXXXXE 338
           LRSKFSSLKHTRDSTTKAKESNIVKKSK EKEIDRMELLSESDLITLNT          E
Sbjct: 432 LRSKFSSLKHTRDSTTKAKESNIVKKSKLEKEIDRMELLSESDLITLNTSLEEVESEIEE 491

Query: 337 FVQDDLINKITSSIEAKQKEYKELDKKLTRLQELTTNQAKLEYKRTEKHKKASMIQTTWE 158
           FVQDDLINKITSSI+AKQKEYKELDKKLTRLQELTTNQAKLEYKR+EKHKKASMIQTTWE
Sbjct: 492 FVQDDLINKITSSIDAKQKEYKELDKKLTRLQELTTNQAKLEYKRSEKHKKASMIQTTWE 551

Query: 157 LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK 2
           LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK
Sbjct: 552 LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK 603


>gb|PKK75174.1| P-loop containing nucleoside triphosphate hydrolase protein
           [Rhizophagus irregularis]
          Length = 1297

 Score =  302 bits (774), Expect = 1e-92
 Identities = 158/172 (91%), Positives = 161/172 (93%)
 Frame = -1

Query: 517 LRSKFSSLKHTRDSTTKAKESNIVKKSKFEKEIDRMELLSESDLITLNTXXXXXXXXXXE 338
           LRSKFSSLKHTRDSTTKAKESNIVKKSK EKEIDRMELLSESDLITLNT          E
Sbjct: 432 LRSKFSSLKHTRDSTTKAKESNIVKKSKLEKEIDRMELLSESDLITLNTSLEEVESEIEE 491

Query: 337 FVQDDLINKITSSIEAKQKEYKELDKKLTRLQELTTNQAKLEYKRTEKHKKASMIQTTWE 158
           FVQDDLINKITSSI+AKQK+YKELDKKLTRLQELTTNQAKLEYKR+EKHKKASMIQTTWE
Sbjct: 492 FVQDDLINKITSSIDAKQKDYKELDKKLTRLQELTTNQAKLEYKRSEKHKKASMIQTTWE 551

Query: 157 LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK 2
           LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK
Sbjct: 552 LLSIKLSELLNKDPDLETLERDWNDRVNSFNRENKELEQQKESVDRDLSNIK 603


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