BLASTX nr result

ID: Ophiopogon26_contig00054480 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054480
         (373 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX70485.1| hypothetical protein RirG_087010 [Rhizophagus irr...   179   6e-50
dbj|GBC17338.1| serine/arginine-rich splicing factor 6 [Rhizopha...   179   6e-50

>gb|EXX70485.1| hypothetical protein RirG_087010 [Rhizophagus irregularis DAOM
           197198w]
          Length = 1382

 Score =  179 bits (455), Expect = 6e-50
 Identities = 96/110 (87%), Positives = 99/110 (90%)
 Frame = +3

Query: 42  MSDQLELMFDLLQQEVEKLTADLAREDSDDLLHSNNVNPDPISENDSSLELDANLYSLYN 221
           MS QLELMFDLLQQEV+KLTADLAREDSDDLLHSN+VNPD ISENDS LELDANLYSLYN
Sbjct: 1   MSGQLELMFDLLQQEVDKLTADLAREDSDDLLHSNDVNPDTISENDSPLELDANLYSLYN 60

Query: 222 LKSEIERSLKKEDSSNSITNDPDSPSKLPTISFNTHQRSASHKETRNLDS 371
           LKSEIERSLKKEDSSN I +DP   S  PTISFNTHQRSASHKE RNLDS
Sbjct: 61  LKSEIERSLKKEDSSNPIISDP-VLSIPPTISFNTHQRSASHKEMRNLDS 109


>dbj|GBC17338.1| serine/arginine-rich splicing factor 6 [Rhizophagus irregularis
           DAOM 181602]
          Length = 1317

 Score =  179 bits (455), Expect = 6e-50
 Identities = 96/110 (87%), Positives = 99/110 (90%)
 Frame = +3

Query: 42  MSDQLELMFDLLQQEVEKLTADLAREDSDDLLHSNNVNPDPISENDSSLELDANLYSLYN 221
           MS QLELMFDLLQQEV+KLTADLAREDSDDLLHSN+VNPD ISENDS LELDANLYSLYN
Sbjct: 1   MSGQLELMFDLLQQEVDKLTADLAREDSDDLLHSNDVNPDTISENDSPLELDANLYSLYN 60

Query: 222 LKSEIERSLKKEDSSNSITNDPDSPSKLPTISFNTHQRSASHKETRNLDS 371
           LKSEIERSLKKEDSSN I +DP   S  PTISFNTHQRSASHKE RNLDS
Sbjct: 61  LKSEIERSLKKEDSSNPIISDP-VLSIPPTISFNTHQRSASHKEMRNLDS 109


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