BLASTX nr result

ID: Ophiopogon26_contig00054453 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054453
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX78363.1| Swi5p [Rhizophagus irregularis DAOM 197198w] >gi|...   129   7e-33
gb|PKK75183.1| hypothetical protein RhiirC2_737199 [Rhizophagus ...   127   1e-32

>gb|EXX78363.1| Swi5p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC42416.1| c2h2 transcription factor [Rhizophagus irregularis DAOM 181602]
          Length = 429

 Score =  129 bits (323), Expect = 7e-33
 Identities = 84/143 (58%), Positives = 95/143 (66%), Gaps = 13/143 (9%)
 Frame = +1

Query: 1   VPPRSNLKKFHNSSFQGEFSRVTT-SYVKLETKNFSH---KAGPITSGTVSAVIPPAIIP 168
           VPPRSNL KFHNS FQ EF+RVTT SYVKLET NFSH   K+  I SGT SAVIPPA++P
Sbjct: 68  VPPRSNLTKFHNSDFQEEFNRVTTVSYVKLETNNFSHGVNKSSQIISGTASAVIPPAVVP 127

Query: 169 T--TVMTPTVSQVATPIAAIKVFPTEKTVKIINKSNIGNSVDSKAIIPSLVDESAVESK- 339
           T  T MTP VSQ  TP  AIK+   E T K I+K     SVDSK   P  +DESAVES  
Sbjct: 128 TVITSMTPPVSQATTPTTAIKI---ENTAKNIDKYK--PSVDSK---PLPMDESAVESNV 179

Query: 340 ------IDNTETKKKRKLENEVD 390
                 + N ET KK+KLEN ++
Sbjct: 180 VKTENDVPNEETTKKQKLENGLE 202


>gb|PKK75183.1| hypothetical protein RhiirC2_737199 [Rhizophagus irregularis]
          Length = 374

 Score =  127 bits (319), Expect = 1e-32
 Identities = 84/147 (57%), Positives = 95/147 (64%), Gaps = 17/147 (11%)
 Frame = +1

Query: 1   VPPRSNLKKFHNSSFQGEFSRVTT-SYVKLETKNFSH---KAGPITSGTVSAVIPPAIIP 168
           VPPRSNL KFHNS FQ EF+RVTT SYVKLET NFSH   K+  I SGT SAVIPPA++P
Sbjct: 9   VPPRSNLTKFHNSDFQEEFNRVTTVSYVKLETNNFSHGVNKSSQIISGTASAVIPPAVVP 68

Query: 169 T------TVMTPTVSQVATPIAAIKVFPTEKTVKIINKSNIGNSVDSKAIIPSLVDESAV 330
           T      T MTP VSQ  TP  AIK+   E T K I+K     SVDSK   P  +DESAV
Sbjct: 69  TVTTSVITSMTPPVSQATTPTTAIKI---ENTAKNIDKYK--PSVDSK---PLPMDESAV 120

Query: 331 ESK-------IDNTETKKKRKLENEVD 390
           ES        + N ET KK+KLEN ++
Sbjct: 121 ESNVVKTENDVPNEETTKKQKLENGLE 147