BLASTX nr result

ID: Ophiopogon26_contig00054371 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054371
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC57995.1| hypothetical protein RhiirA1_68169 [Rhizophagus i...    58   6e-16

>gb|PKC57995.1| hypothetical protein RhiirA1_68169 [Rhizophagus irregularis]
 gb|PKY30369.1| hypothetical protein RhiirB3_70245 [Rhizophagus irregularis]
          Length = 150

 Score = 57.8 bits (138), Expect(2) = 6e-16
 Identities = 31/49 (63%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
 Frame = -3

Query: 140 ENNWIDRVGGKIGLLR*FL---SRIKPSVFFFGNIVYRENVDRKNSNII 3
           ENNWI RVGG IGLL          +     FGNIVYRENVDRKNSNII
Sbjct: 94  ENNWIGRVGGNIGLLEVISFENQTERNQCILFGNIVYRENVDRKNSNII 142



 Score = 53.9 bits (128), Expect(2) = 6e-16
 Identities = 35/55 (63%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -1

Query: 346 RAFMNAVKISKIKYHLIPKITYRILLTNRANLSITKIKTKLN---FLESRYGSRE 191
           +AFMNAVKISKIKYHLIPK      ++   N   TKIKTKLN    LESRYGS E
Sbjct: 18  KAFMNAVKISKIKYHLIPKSRVVFGVSVGYN---TKIKTKLNPQTDLESRYGSIE 69


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