BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054250
         (738 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY41279.1| TPR-like protein, partial [Rhizophagus irregularis]    341   e-116
gb|PKK70191.1| TPR-like protein [Rhizophagus irregularis]             341   e-116
gb|EXX52900.1| hypothetical protein RirG_248950 [Rhizophagus irr...   339   e-115
gb|PKY24748.1| TPR-like protein [Rhizophagus irregularis]             339   e-115
gb|PKC06760.1| TPR-like protein [Rhizophagus irregularis] >gi|13...   339   e-115
dbj|GBC39670.1| pentatricopeptide repeat-containing protein at5g...   274   7e-96
gb|ERM94960.1| hypothetical protein AMTR_s00009p00214080 [Ambore...    71   3e-10
ref|XP_020524800.1| pentatricopeptide repeat-containing protein ...    71   3e-10
ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containi...    70   7e-10
ref|XP_010539933.1| PREDICTED: putative pentatricopeptide repeat...    66   1e-08
ref|XP_006292416.1| pentatricopeptide repeat-containing protein ...    65   2e-08
pdb|4PJR|A Chain A, Crystal structure of designed cPPR-NRE protein     63   6e-08
ref|XP_010539935.1| PREDICTED: putative pentatricopeptide repeat...    64   6e-08
ref|XP_008808854.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    64   6e-08
ref|XP_022768875.1| putative pentatricopeptide repeat-containing...    63   1e-07
ref|XP_019092977.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_010512499.1| PREDICTED: pentatricopeptide repeat-containi...    62   2e-07
ref|XP_021894129.1| pentatricopeptide repeat-containing protein ...    62   3e-07
ref|XP_008445872.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-07
ref|XP_020998837.1| pentatricopeptide repeat-containing protein ...    61   4e-07

>gb|PKY41279.1| TPR-like protein, partial [Rhizophagus irregularis]
          Length = 784

 Score =  341 bits (875), Expect(2) = e-116
 Identities = 175/196 (89%), Positives = 177/196 (90%)
 Frame = +3

Query: 150 KQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVN 329
           K KNLFKDIKDSGIELD HLYTKILKIYCYEPGNLQKVLNLFNQIK HQQHKGNIK FVN
Sbjct: 328 KAKNLFKDIKDSGIELDTHLYTKILKIYCYEPGNLQKVLNLFNQIK-HQQHKGNIK-FVN 385

Query: 330 TLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS 509
           TLL+YLIKEKEFSNALRVYEELVDIGFIHD  TLASIIPAYYHTGNNDIAFKLFNEKMDS
Sbjct: 386 TLLDYLIKEKEFSNALRVYEELVDIGFIHDAATLASIIPAYYHTGNNDIAFKLFNEKMDS 445

Query: 510 FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQ 689
           FLNMRKLFSLFSNLGKEH             TLYN+LITYFLTQDDITNALEIYSHLLQQ
Sbjct: 446 FLNMRKLFSLFSNLGKEHSKNFFKQFASSSSTLYNTLITYFLTQDDITNALEIYSHLLQQ 505

Query: 690 GYFLNILNITILCKKL 737
           GYFLNILNITILCKKL
Sbjct: 506 GYFLNILNITILCKKL 521



 Score =  105 bits (263), Expect(2) = e-116
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +2

Query: 2   INQAERIYEKMKSNSTTRMVNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 157
           INQAERIYEKMKSNSTTRM NSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK
Sbjct: 279 INQAERIYEKMKSNSTTRMGNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 330


>gb|PKK70191.1| TPR-like protein [Rhizophagus irregularis]
          Length = 483

 Score =  341 bits (875), Expect(2) = e-116
 Identities = 175/196 (89%), Positives = 177/196 (90%)
 Frame = +3

Query: 150 KQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVN 329
           K KNLFKDIKDSGIELD HLYTKILKIYCYEPGNLQKVLNLFNQIK HQQHKGNIK FVN
Sbjct: 145 KAKNLFKDIKDSGIELDTHLYTKILKIYCYEPGNLQKVLNLFNQIK-HQQHKGNIK-FVN 202

Query: 330 TLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS 509
           TLL+YLIKEKEFSNALRVYEELVDIGFIHD  TLASIIPAYYHTGNNDIAFKLFNEKMDS
Sbjct: 203 TLLDYLIKEKEFSNALRVYEELVDIGFIHDAATLASIIPAYYHTGNNDIAFKLFNEKMDS 262

Query: 510 FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQ 689
           FLNMRKLFSLFSNLGKEH             TLYN+LITYFLTQDDITNALEIYSHLLQQ
Sbjct: 263 FLNMRKLFSLFSNLGKEHSKNFFKQFASFSSTLYNTLITYFLTQDDITNALEIYSHLLQQ 322

Query: 690 GYFLNILNITILCKKL 737
           GYFLNILNITILCKKL
Sbjct: 323 GYFLNILNITILCKKL 338



 Score =  105 bits (263), Expect(2) = e-116
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +2

Query: 2   INQAERIYEKMKSNSTTRMVNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 157
           INQAERIYEKMKSNSTTRM NSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK
Sbjct: 96  INQAERIYEKMKSNSTTRMGNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 147


>gb|EXX52900.1| hypothetical protein RirG_248950 [Rhizophagus irregularis DAOM
           197198w]
 gb|POG81523.1| hypothetical protein GLOIN_2v1834927 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 804

 Score =  339 bits (869), Expect(2) = e-115
 Identities = 174/196 (88%), Positives = 176/196 (89%)
 Frame = +3

Query: 150 KQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVN 329
           K KNLFKDIKDSGIELD HLYTKILKIYCYEPGNLQKVLNLFNQIK HQQHKGNIK FVN
Sbjct: 348 KAKNLFKDIKDSGIELDTHLYTKILKIYCYEPGNLQKVLNLFNQIK-HQQHKGNIK-FVN 405

Query: 330 TLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS 509
           TLL+YLIKEKEFSNALRVYEELVDIGFIHD  TLASIIPAYYHTGNNDIAFKLFNEKMDS
Sbjct: 406 TLLDYLIKEKEFSNALRVYEELVDIGFIHDAATLASIIPAYYHTGNNDIAFKLFNEKMDS 465

Query: 510 FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQ 689
           FLNMRKLFSLFSNLGKEH              LYN+LITYFLTQDDITNALEIYSHLLQQ
Sbjct: 466 FLNMRKLFSLFSNLGKEHSKNFFKQFASSSSILYNTLITYFLTQDDITNALEIYSHLLQQ 525

Query: 690 GYFLNILNITILCKKL 737
           GYFLNILNITILCKKL
Sbjct: 526 GYFLNILNITILCKKL 541



 Score =  105 bits (263), Expect(2) = e-115
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +2

Query: 2   INQAERIYEKMKSNSTTRMVNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 157
           INQAERIYEKMKSNSTTRM NSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK
Sbjct: 299 INQAERIYEKMKSNSTTRMGNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 350


>gb|PKY24748.1| TPR-like protein [Rhizophagus irregularis]
          Length = 784

 Score =  339 bits (869), Expect(2) = e-115
 Identities = 174/196 (88%), Positives = 176/196 (89%)
 Frame = +3

Query: 150 KQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVN 329
           K KNLFKDIKDSGIELD HLYTKILKIYCYEPGNLQKVLNLFNQIK HQQHKGNIK FVN
Sbjct: 328 KAKNLFKDIKDSGIELDTHLYTKILKIYCYEPGNLQKVLNLFNQIK-HQQHKGNIK-FVN 385

Query: 330 TLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS 509
           TLL+YLIKEKEFSNALRVYEELVDIGFIHD  TLASIIPAYYHTGNNDIAFKLFNEKMDS
Sbjct: 386 TLLDYLIKEKEFSNALRVYEELVDIGFIHDAATLASIIPAYYHTGNNDIAFKLFNEKMDS 445

Query: 510 FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQ 689
           FLNMRKLFSLFSNLGKEH              LYN+LITYFLTQDDITNALEIYSHLLQQ
Sbjct: 446 FLNMRKLFSLFSNLGKEHSKNFFKQFASSSSILYNTLITYFLTQDDITNALEIYSHLLQQ 505

Query: 690 GYFLNILNITILCKKL 737
           GYFLNILNITILCKKL
Sbjct: 506 GYFLNILNITILCKKL 521



 Score =  105 bits (263), Expect(2) = e-115
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +2

Query: 2   INQAERIYEKMKSNSTTRMVNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 157
           INQAERIYEKMKSNSTTRM NSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK
Sbjct: 279 INQAERIYEKMKSNSTTRMGNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 330


>gb|PKC06760.1| TPR-like protein [Rhizophagus irregularis]
 gb|PKC64160.1| TPR-like protein [Rhizophagus irregularis]
          Length = 776

 Score =  339 bits (869), Expect(2) = e-115
 Identities = 174/196 (88%), Positives = 176/196 (89%)
 Frame = +3

Query: 150 KQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVN 329
           K KNLFKDIKDSGIELD HLYTKILKIYCYEPGNLQKVLNLFNQIK HQQHKGNIK FVN
Sbjct: 320 KAKNLFKDIKDSGIELDTHLYTKILKIYCYEPGNLQKVLNLFNQIK-HQQHKGNIK-FVN 377

Query: 330 TLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS 509
           TLL+YLIKEKEFSNALRVYEELVDIGFIHD  TLASIIPAYYHTGNNDIAFKLFNEKMDS
Sbjct: 378 TLLDYLIKEKEFSNALRVYEELVDIGFIHDAATLASIIPAYYHTGNNDIAFKLFNEKMDS 437

Query: 510 FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQ 689
           FLNMRKLFSLFSNLGKEH              LYN+LITYFLTQDDITNALEIYSHLLQQ
Sbjct: 438 FLNMRKLFSLFSNLGKEHSKNFFKQFASSSSILYNTLITYFLTQDDITNALEIYSHLLQQ 497

Query: 690 GYFLNILNITILCKKL 737
           GYFLNILNITILCKKL
Sbjct: 498 GYFLNILNITILCKKL 513



 Score =  105 bits (263), Expect(2) = e-115
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +2

Query: 2   INQAERIYEKMKSNSTTRMVNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 157
           INQAERIYEKMKSNSTTRM NSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK
Sbjct: 271 INQAERIYEKMKSNSTTRMGNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 322


>dbj|GBC39670.1| pentatricopeptide repeat-containing protein at5g61990,
           mitochondrial [Rhizophagus irregularis DAOM 181602]
          Length = 775

 Score =  274 bits (700), Expect(2) = 7e-96
 Identities = 145/196 (73%), Positives = 147/196 (75%)
 Frame = +3

Query: 150 KQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVN 329
           K KNLFKDIKDSGIELD HLYTKILKIYCYEP                            
Sbjct: 348 KAKNLFKDIKDSGIELDTHLYTKILKIYCYEP---------------------------- 379

Query: 330 TLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS 509
              +YLIKEKEFSNALRVYEELVDIGFIHD  TLASIIPAYYHTGNNDIAFKLFNEKMDS
Sbjct: 380 ---DYLIKEKEFSNALRVYEELVDIGFIHDAATLASIIPAYYHTGNNDIAFKLFNEKMDS 436

Query: 510 FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQ 689
           FLNMRKLFSLFSNLGKEH              LYN+LITYFLTQDDITNALEIYSHLLQQ
Sbjct: 437 FLNMRKLFSLFSNLGKEHSKNFFKQFASSSSILYNTLITYFLTQDDITNALEIYSHLLQQ 496

Query: 690 GYFLNILNITILCKKL 737
           GYFLNILNITILCKKL
Sbjct: 497 GYFLNILNITILCKKL 512



 Score =  105 bits (263), Expect(2) = 7e-96
 Identities = 51/52 (98%), Positives = 51/52 (98%)
 Frame = +2

Query: 2   INQAERIYEKMKSNSTTRMVNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 157
           INQAERIYEKMKSNSTTRM NSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK
Sbjct: 299 INQAERIYEKMKSNSTTRMGNSLDKCEVIVDKFTLDCLLSGYLNYGHLDKAK 350


>gb|ERM94960.1| hypothetical protein AMTR_s00009p00214080 [Amborella trichopoda]
          Length = 715

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
 Frame = +3

Query: 159  NLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLL 338
            N FK +   G+  D+ +Y  ++   C E G+L +   L+ ++ +       I Y    L+
Sbjct: 514  NFFKSMVKRGLVPDVVIYGTLIDGLCKE-GSLMEAFKLYARMARDGVPPNTIIY--TNLI 570

Query: 339  NYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS--- 509
            + L K+     AL ++EE+V  G + D +   SII  +   GN   A++L++E + S   
Sbjct: 571  DALCKKTRMHEALNIFEEMVRKGLVPDTICYTSIIAGFCRVGNMAKAWELYSEMVQSGSQ 630

Query: 510  --FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTL-----YNSLITYFLTQDDITNALEI 668
               +    L   +  LG+ H             T+     Y SLIT F    ++  A E+
Sbjct: 631  PDVITFTCLVDGYRKLGRTHDALMLVDEMIKSDTIPNVVTYTSLITGFRNMGELDKAFEV 690

Query: 669  YSHLLQQGYFLNILNITILCKK 734
            Y  +L++G   + +   +L KK
Sbjct: 691  YDAMLEKGVLPDSVTFAVLHKK 712


>ref|XP_020524800.1| pentatricopeptide repeat-containing protein At1g62670, mitochondrial
            isoform X1 [Amborella trichopoda]
 ref|XP_006827544.2| pentatricopeptide repeat-containing protein At1g62670, mitochondrial
            isoform X1 [Amborella trichopoda]
 ref|XP_020524810.1| pentatricopeptide repeat-containing protein At1g62670, mitochondrial
            isoform X1 [Amborella trichopoda]
 ref|XP_020524817.1| pentatricopeptide repeat-containing protein At1g62670, mitochondrial
            isoform X1 [Amborella trichopoda]
 ref|XP_020524821.1| pentatricopeptide repeat-containing protein At1g62670, mitochondrial
            isoform X1 [Amborella trichopoda]
          Length = 731

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
 Frame = +3

Query: 159  NLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLL 338
            N FK +   G+  D+ +Y  ++   C E G+L +   L+ ++ +       I Y    L+
Sbjct: 530  NFFKSMVKRGLVPDVVIYGTLIDGLCKE-GSLMEAFKLYARMARDGVPPNTIIY--TNLI 586

Query: 339  NYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDS--- 509
            + L K+     AL ++EE+V  G + D +   SII  +   GN   A++L++E + S   
Sbjct: 587  DALCKKTRMHEALNIFEEMVRKGLVPDTICYTSIIAGFCRVGNMAKAWELYSEMVQSGSQ 646

Query: 510  --FLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTL-----YNSLITYFLTQDDITNALEI 668
               +    L   +  LG+ H             T+     Y SLIT F    ++  A E+
Sbjct: 647  PDVITFTCLVDGYRKLGRTHDALMLVDEMIKSDTIPNVVTYTSLITGFRNMGELDKAFEV 706

Query: 669  YSHLLQQGYFLNILNITILCKK 734
            Y  +L++G   + +   +L KK
Sbjct: 707  YDAMLEKGVLPDSVTFAVLHKK 728


>ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Cucumis sativus]
 ref|XP_011654904.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Cucumis sativus]
 gb|KGN50452.1| hypothetical protein Csa_5G175760 [Cucumis sativus]
          Length = 1032

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
 Frame = +3

Query: 162  LFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLN 341
            +F     +G+  D+ LY  ++  +C E G+++K   L++++  +  +   + Y  NTL+N
Sbjct: 648  VFLKFLKTGVVPDVFLYNSLISGFCKE-GDIEKASQLYDEMLHNGINPNIVVY--NTLIN 704

Query: 342  YLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKM------ 503
             L K  E + A  +++E+ +   + DVVT ++II  Y  +GN   AFKLF+E +      
Sbjct: 705  GLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISP 764

Query: 504  DSFL------------NMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDD 647
            D ++            N+ K  SLF    ++              + +NSLI  F     
Sbjct: 765  DGYIYCILIDGCGKEGNLEKALSLFHEAQQK---------SVGSLSAFNSLIDSFCKHGK 815

Query: 648  ITNALEIYSHLLQQGYFLNILNITIL 725
            +  A E++  ++ +    NI+  TIL
Sbjct: 816  VIEARELFDDMVDKKLTPNIVTYTIL 841


>ref|XP_010539933.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290 isoform X1 [Tarenaya hassleriana]
          Length = 951

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 50/196 (25%), Positives = 87/196 (44%)
 Frame = +3

Query: 144 WIKQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYF 323
           W +   +FK+   S    D+     +LK+Y  E G ++  L+ F+ +  + +    +   
Sbjct: 144 WDELVRVFKEFSFSPTVFDM-----VLKVYA-EKGMIKNALHAFDNMGNYGRAPSLLS-- 195

Query: 324 VNTLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKM 503
            N+LL+ L+K+ E+  ALRVY++++  G + DV T + ++ AY   G  D A K   +  
Sbjct: 196 CNSLLSNLVKKSEYYVALRVYDQMISYGIVPDVFTCSIVVNAYCKDGKLDKAEKFAKQME 255

Query: 504 DSFLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLL 683
           +S L +                             YNSLI  F    D+  AL +   + 
Sbjct: 256 NSGLELN-------------------------VVTYNSLIDGFARVGDVEGALRLSQSMS 290

Query: 684 QQGYFLNILNITILCK 731
           Q+G   N++  T+L K
Sbjct: 291 QRGISRNVITYTLLVK 306


>ref|XP_006292416.1| pentatricopeptide repeat-containing protein At3g61520, mitochondrial
            [Capsella rubella]
 gb|EOA25314.1| hypothetical protein CARUB_v10018630mg [Capsella rubella]
          Length = 767

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 11/199 (5%)
 Frame = +3

Query: 174  IKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLNYLIK 353
            +K+ G  LD+  Y  ++ ++C +  N +KV  +   +++      +I Y  NTL+++  K
Sbjct: 537  LKERGFSLDLLAYNMLIGLFC-DKNNTEKVYEMLRDMEKEGMKPDSITY--NTLISFFGK 593

Query: 354  EKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEK-MDSFLNMRK- 527
             K+F +  R+ EE+ + G    VVT  ++I AY   G  + A KLF E  M S +N    
Sbjct: 594  LKDFESVQRMMEEMREDGLDPTVVTYGAVIDAYCSVGELNEAVKLFKEMGMRSKVNPNTV 653

Query: 528  ----LFSLFSNLGKEHXXXXXXXXXXXXXT-----LYNSLITYFLTQDDITNALEIYSHL 680
                L + FSNLG                       YN+L      ++     L++   +
Sbjct: 654  IYNILINAFSNLGNVEQALTLKEEMKMKMVRPNVETYNALFNCLKEKNQAETLLKLMDEM 713

Query: 681  LQQGYFLNILNITILCKKL 737
            ++Q    N + + IL ++L
Sbjct: 714  VEQSCEPNQITMEILMERL 732


>pdb|4PJR|A Chain A, Crystal structure of designed cPPR-NRE protein
          Length = 303

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
 Frame = +3

Query: 162 LFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLN 341
           LF+++K+ GI  D+  YT ++     + G L++ L LF ++K+       + Y  NTL++
Sbjct: 95  LFEEMKEKGIVPDVVTYTTLIS-GLGKAGRLEEALELFEEMKEKGIVPNVVTY--NTLIS 151

Query: 342 YLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDSFL-- 515
            L K      AL ++EE+ + G + DVVT  ++I      G  + A +LF E  +  +  
Sbjct: 152 GLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVP 211

Query: 516 NMRKLFSLFSNLGK--------EHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIY 671
           N+    +L S LGK        E                Y +LI+       +  ALE++
Sbjct: 212 NVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELF 271

Query: 672 SHLLQQGYFLNILNITILCKKL 737
             + ++G   N++    L   L
Sbjct: 272 EEMKEKGIVPNVVTYNTLISGL 293


>ref|XP_010539935.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290 isoform X2 [Tarenaya hassleriana]
          Length = 789

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 45/171 (26%), Positives = 78/171 (45%)
 Frame = +3

Query: 219 ILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLNYLIKEKEFSNALRVYEELV 398
           +LK+Y  E G ++  L+ F+ +  + +    +    N+LL+ L+K+ E+  ALRVY++++
Sbjct: 2   VLKVYA-EKGMIKNALHAFDNMGNYGRAPSLLS--CNSLLSNLVKKSEYYVALRVYDQMI 58

Query: 399 DIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKMDSFLNMRKLFSLFSNLGKEHXXXXX 578
             G + DV T + ++ AY   G  D A K   +  +S L +                   
Sbjct: 59  SYGIVPDVFTCSIVVNAYCKDGKLDKAEKFAKQMENSGLELN------------------ 100

Query: 579 XXXXXXXXTLYNSLITYFLTQDDITNALEIYSHLLQQGYFLNILNITILCK 731
                     YNSLI  F    D+  AL +   + Q+G   N++  T+L K
Sbjct: 101 -------VVTYNSLIDGFARVGDVEGALRLSQSMSQRGISRNVITYTLLVK 144


>ref|XP_008808854.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g16880-like [Phoenix dactylifera]
          Length = 797

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
 Frame = +3

Query: 168  KDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLNYL 347
            + +++ G+  D+  Y  ++  YC   GN+ K  NL +++           + +NT+++ L
Sbjct: 414  RKMEEQGLSPDLITYNTLISAYC-RAGNVAKAFNLMDEMVGRGLKMDT--FTLNTVIHNL 470

Query: 348  IKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEK-----MDSF 512
             KEK F  A R+       GF+ D V+  ++I AY+   N + A KL++E      M + 
Sbjct: 471  CKEKRFDEACRLLRSPPKRGFVPDEVSYGTVIAAYFKDENPNEAMKLWDEMNERKIMPNV 530

Query: 513  LNMRKLFSLFSNLGK-----EHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSH 677
                 + S    LGK     +              T YN++I  +  + ++  A + ++ 
Sbjct: 531  ATYNAVISGLCRLGKTEEAIKKLNELLERGLVPDETTYNTIIHGYCREGELEKAFQFHNK 590

Query: 678  LLQQGYFLNILNITILCKKL 737
            +++  +  N++   IL   L
Sbjct: 591  MVENSFKPNVITCNILMNGL 610


>ref|XP_022768875.1| putative pentatricopeptide repeat-containing protein At1g19290
           [Durio zibethinus]
          Length = 952

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
 Frame = +3

Query: 141 IWIKQKNLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKY 320
           IW +   ++KD K S +  D+     +LKIY  E G ++  LN+F+ + ++    G +  
Sbjct: 163 IWNELVRVYKDFKFSPLVFDM-----LLKIYA-ERGLIKNALNVFDNMGKY----GRVPS 212

Query: 321 F--VNTLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFN 494
               N LL+ L+K  E   AL VYE+++ IG + DV T + I+ AY   G  + A +   
Sbjct: 213 LRSCNCLLSNLVKNGESYTALLVYEQMIRIGIVPDVFTSSIIVNAYCKEGRVERAVEFVK 272

Query: 495 EKMDSFLNMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYS 674
           E                NLG +                YNSLI  F++  D+    ++  
Sbjct: 273 E--------------MENLGFQ-----------LNVVSYNSLIDGFVSLGDMEGVKKVLK 307

Query: 675 HLLQQGYFLNILNITILCK 731
            + ++G   N++  T+L K
Sbjct: 308 LMFEKGISRNVVTYTMLIK 326


>ref|XP_019092977.1| PREDICTED: pentatricopeptide repeat-containing protein At5g28460-like
            [Camelina sativa]
          Length = 766

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
 Frame = +3

Query: 174  IKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLNYLIK 353
            +K+ G  LD+  Y  ++ ++CY+  N +KV  +   +++      +I Y  NTL+++  +
Sbjct: 537  MKEGGFSLDLLAYNMLIGLFCYK-NNAEKVYEMLTDMEKEGMKPDSITY--NTLISFFGR 593

Query: 354  EKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEK-MDSFLNMRK- 527
             K+F +  ++ E++ + G    VVT  ++I AY   G  + A KLF E  + S +N    
Sbjct: 594  HKDFQSVQKMMEQMREDGLDPTVVTYGAVIEAYCSVGELNEAVKLFKEMGLQSKVNPNTV 653

Query: 528  ----LFSLFSNLGKEHXXXXXXXXXXXXXT-----LYNSLITYFLTQDDITNALEIYSHL 680
                L + FS LG                       YN+L      +      L++   +
Sbjct: 654  IYNILINAFSKLGNYEQALSLKEEMKMKMVRPNVETYNALFNCLKEKSQAETLLKLMDEM 713

Query: 681  LQQGYFLNILNITILCKKL 737
            ++Q    N + + IL ++L
Sbjct: 714  VEQSCEPNQITMEILMERL 732


>ref|XP_010512499.1| PREDICTED: pentatricopeptide repeat-containing protein At5g28460
            [Camelina sativa]
          Length = 769

 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 11/199 (5%)
 Frame = +3

Query: 174  IKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLNYLIK 353
            +K+ G  LD+  Y  ++ ++CY+  N +KV  +   +++      +I Y  NTL+++  +
Sbjct: 540  LKEGGFSLDLLAYNMLIGLFCYK-NNAEKVYEMLTDMEKEGMKPDSITY--NTLISFFGR 596

Query: 354  EKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEK-MDSFLNMRK- 527
             K+F +  ++ E++ + G    VVT  ++I AY   G  + A KLF E  + S +N    
Sbjct: 597  HKDFQSVQKMMEQMREDGLDPTVVTYGAVIEAYCSVGELNEAVKLFKEMGLQSKVNPNTV 656

Query: 528  ----LFSLFSNLGKEHXXXXXXXXXXXXXT-----LYNSLITYFLTQDDITNALEIYSHL 680
                L + FS LG                       YN+L      +      L++   +
Sbjct: 657  IYNILINAFSKLGNYEQALSLKEEMKMKMVRPNVETYNALFNCLKEKSQSETLLKLMDEM 716

Query: 681  LQQGYFLNILNITILCKKL 737
            ++Q    N + + IL ++L
Sbjct: 717  VEQSCEPNQITMEILMERL 735


>ref|XP_021894129.1| pentatricopeptide repeat-containing protein At5g01110 [Carica
           papaya]
 ref|XP_021894130.1| pentatricopeptide repeat-containing protein At5g01110 [Carica
           papaya]
 ref|XP_021894131.1| pentatricopeptide repeat-containing protein At5g01110 [Carica
           papaya]
 ref|XP_021894132.1| pentatricopeptide repeat-containing protein At5g01110 [Carica
           papaya]
          Length = 738

 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 14/202 (6%)
 Frame = +3

Query: 171 DIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLNYLI 350
           ++KD G+  D+  Y  ++  YC E G +QK   + N +       G   Y  N ++N L 
Sbjct: 271 EMKDKGVYADMVTYNTLINAYCRE-GLMQKAFEVMNSMSGKGLKPGIFTY--NAIINGLC 327

Query: 351 KEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEK-----MDSFL 515
           K+ E+  A +V EE++ IG I D  T  +++       N   A ++FNE      +   +
Sbjct: 328 KKGEYETAKKVLEEMLRIGLIPDTTTYNTLLVEVCRNDNFLEAKRIFNEMSCHRVLPDLI 387

Query: 516 NMRKLFSLFSNLG-----KEHXXXXXXXXXXXXXTLYNSLITYFLTQDDITNALEIYSHL 680
           +   +   FS  G      E+              +Y  LI  +     +  AL+I   +
Sbjct: 388 SFSAIIGAFSRNGLLDQALEYFRSMKNIGLYPDTVVYTILIDGYCRHRMMLEALKIRDEM 447

Query: 681 LQQGYFLNILN----ITILCKK 734
           L+QG  ++++     +  LCK+
Sbjct: 448 LEQGLVMDVVTYNAILNGLCKQ 469


>ref|XP_008445872.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Cucumis melo]
 ref|XP_008445873.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Cucumis melo]
 ref|XP_008445874.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Cucumis melo]
 ref|XP_008445875.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial [Cucumis melo]
          Length = 1033

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
 Frame = +3

Query: 162  LFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKYFVNTLLN 341
            +F +    G+  D+ LY  ++  +C E G+++K   L+ ++  +  +   + Y  NTL+N
Sbjct: 649  VFLEFLKKGLAPDVFLYNSLISGFCKE-GDIEKASQLYEEMLHNGINPNIVVY--NTLIN 705

Query: 342  YLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNEKM------ 503
             L K  E   A  +++++     + +VVT ++I+  Y  +GN   AFKLF+E +      
Sbjct: 706  GLCKLGEVKKARELFDKIEGKDLVPNVVTYSTIVDGYCKSGNLTEAFKLFDEMISKGISP 765

Query: 504  DSFL------------NMRKLFSLFSNLGKEHXXXXXXXXXXXXXTLYNSLITYFLTQDD 647
            D ++            N+ K  SLF    ++              + +NSLI  F     
Sbjct: 766  DGYIYCILIDGCGKEGNLEKALSLFHEALQK---------SVASLSAFNSLIDSFCKHGK 816

Query: 648  ITNALEIYSHLLQQGYFLNILNITIL 725
            +  A E++  ++ +    N +  TIL
Sbjct: 817  VIEARELFDDMVDKKVTPNSVTYTIL 842


>ref|XP_020998837.1| pentatricopeptide repeat-containing protein At5g41170,
           mitochondrial-like [Arachis duranensis]
          Length = 597

 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
 Frame = +3

Query: 144 WIKQK-NLFKDIKDSGIELDIHLYTKILKIYCYEPGNLQKVLNLFNQIKQHQQHKGNIKY 320
           W+K    LF  IK+ GI+ DI+ YT ++   C + G LQ    +F  +     H     Y
Sbjct: 469 WLKNALMLFNQIKECGIDPDIYTYTILIDGLC-KSGRLQNAKEIFQDLSIKGYHLNTRTY 527

Query: 321 FVNTLLNYLIKEKEFSNALRVYEELVDIGFIHDVVTLASIIPAYYHTGNNDIAFKLFNE 497
            V  ++N L KE   + AL +  E+ D GF  D VT  +II A    G ND A K   E
Sbjct: 528 TV--MINGLCKEGLLNEALALMSEMEDHGFSPDAVTYETIIRALLEKGENDQALKHLRE 584