BLASTX nr result

ID: Ophiopogon26_contig00054210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054210
         (383 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY42109.1| small-subunit processome [Rhizophagus irregularis]      63   6e-09
gb|PKY26579.1| small-subunit processome [Rhizophagus irregularis]      63   6e-09
gb|PKK68651.1| small-subunit processome [Rhizophagus irregularis]      63   6e-09
gb|PKC09253.1| small-subunit processome [Rhizophagus irregularis...    63   6e-09
gb|EXX63695.1| Utp14p [Rhizophagus irregularis DAOM 197198w] >gi...    63   6e-09
dbj|GBC16887.1| Nucleolar protein, component of the small subuni...    63   6e-09

>gb|PKY42109.1| small-subunit processome [Rhizophagus irregularis]
          Length = 959

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 146 LESYEYTGLEKXXXXXXXXXXXXXAFNDSDEERFDHFIFRGSNQKRIKKRL 298
           +ESYEY G++K             AFNDSDEERF+HFIFRGS QK IKKRL
Sbjct: 80  IESYEYIGVDKIEKKDDEEIDSDEAFNDSDEERFEHFIFRGSIQKDIKKRL 130


>gb|PKY26579.1| small-subunit processome [Rhizophagus irregularis]
          Length = 961

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 146 LESYEYTGLEKXXXXXXXXXXXXXAFNDSDEERFDHFIFRGSNQKRIKKRL 298
           +ESYEY G++K             AFNDSDEERF+HFIFRGS QK IKKRL
Sbjct: 80  IESYEYIGVDKIEKKDDEEIDSDEAFNDSDEERFEHFIFRGSIQKDIKKRL 130


>gb|PKK68651.1| small-subunit processome [Rhizophagus irregularis]
          Length = 961

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 146 LESYEYTGLEKXXXXXXXXXXXXXAFNDSDEERFDHFIFRGSNQKRIKKRL 298
           +ESYEY G++K             AFNDSDEERF+HFIFRGS QK IKKRL
Sbjct: 80  IESYEYIGVDKIKKKDDEEIDSDEAFNDSDEERFEHFIFRGSIQKDIKKRL 130


>gb|PKC09253.1| small-subunit processome [Rhizophagus irregularis]
 gb|PKC09491.1| small-subunit processome [Rhizophagus irregularis]
 gb|PKC61735.1| small-subunit processome [Rhizophagus irregularis]
          Length = 961

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 146 LESYEYTGLEKXXXXXXXXXXXXXAFNDSDEERFDHFIFRGSNQKRIKKRL 298
           +ESYEY G++K             AFNDSDEERF+HFIFRGS QK IKKRL
Sbjct: 80  IESYEYIGVDKIEKKDDEEIDSDEAFNDSDEERFEHFIFRGSIQKDIKKRL 130


>gb|EXX63695.1| Utp14p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC16886.1| nucleolar protein, component of the small subunit processome;
           utp14p [Rhizophagus irregularis DAOM 181602]
          Length = 961

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 146 LESYEYTGLEKXXXXXXXXXXXXXAFNDSDEERFDHFIFRGSNQKRIKKRL 298
           +ESYEY G++K             AFNDSDEERF+HFIFRGS QK IKKRL
Sbjct: 80  IESYEYIGVDKIEKKDDEEIDSDEAFNDSDEERFEHFIFRGSIQKDIKKRL 130


>dbj|GBC16887.1| Nucleolar protein, component of the small subunit processome Utp14p
           [Rhizophagus irregularis DAOM 181602]
 gb|POG80351.1| small-subunit processome [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 968

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 31/51 (60%), Positives = 35/51 (68%)
 Frame = +2

Query: 146 LESYEYTGLEKXXXXXXXXXXXXXAFNDSDEERFDHFIFRGSNQKRIKKRL 298
           +ESYEY G++K             AFNDSDEERF+HFIFRGS QK IKKRL
Sbjct: 80  IESYEYIGVDKIEKKDDEEIDSDEAFNDSDEERFEHFIFRGSIQKDIKKRL 130


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