BLASTX nr result

ID: Ophiopogon26_contig00054201 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054201
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC23574.1| 5'-3' exonuclease [Rhizophagus irregularis DAOM ...    78   1e-13
gb|POG78194.1| exonuclease Kem1, putative [Rhizophagus irregular...    78   1e-13

>dbj|GBC23574.1| 5'-3' exonuclease [Rhizophagus irregularis DAOM 181602]
          Length = 1362

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 64/150 (42%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
 Frame = -2

Query: 478  RYGTNSKYQLRSGQETVQNGQQVYH-NAYPYY--NTYSNRGSRSAPIHSTTNHIANGSHQ 308
            R+GTN  YQ R  QE +QNGQQ Y+ NAYPYY  N YS R +R        + I NGSHQ
Sbjct: 1223 RHGTNINYQSRY-QEALQNGQQYYNSNAYPYYYNNGYSGRSNR-----GWGSIIPNGSHQ 1276

Query: 307  RQTNHNSRSRGA-GSNGY---------------TSSGAIKYGHVANHAYXXXXXXXXXXG 176
            R  N   RSRGA GSNGY                SSGA KYG V N  +           
Sbjct: 1277 RPPN---RSRGASGSNGYIQQSQLHARPISQSQASSGATKYG-VQNQTHHSYRPRSNGNS 1332

Query: 175  YLPRXXXXXXXXXXXXGISQRGRGRTDGKT 86
            +LP                 RGRGR DGKT
Sbjct: 1333 FLPGRGNGSRGIHYGGNGISRGRGRGDGKT 1362


>gb|POG78194.1| exonuclease Kem1, putative [Rhizophagus irregularis DAOM 181602=DAOM
            197198]
          Length = 1371

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 64/150 (42%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
 Frame = -2

Query: 478  RYGTNSKYQLRSGQETVQNGQQVYH-NAYPYY--NTYSNRGSRSAPIHSTTNHIANGSHQ 308
            R+GTN  YQ R  QE +QNGQQ Y+ NAYPYY  N YS R +R        + I NGSHQ
Sbjct: 1232 RHGTNINYQSRY-QEALQNGQQYYNSNAYPYYYNNGYSGRSNR-----GWGSIIPNGSHQ 1285

Query: 307  RQTNHNSRSRGA-GSNGY---------------TSSGAIKYGHVANHAYXXXXXXXXXXG 176
            R  N   RSRGA GSNGY                SSGA KYG V N  +           
Sbjct: 1286 RPPN---RSRGASGSNGYIQQSQLHARPISQSQASSGATKYG-VQNQTHHSYRPRSNGNS 1341

Query: 175  YLPRXXXXXXXXXXXXGISQRGRGRTDGKT 86
            +LP                 RGRGR DGKT
Sbjct: 1342 FLPGRGNGSRGIHYGGNGISRGRGRGDGKT 1371


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