BLASTX nr result

ID: Ophiopogon26_contig00054038 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00054038
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC44052.1| Tis13_26542: PROVISIONAL [Rhizophagus irregulari...    68   6e-12
gb|PKK64701.1| hypothetical protein RhiirC2_716090 [Rhizophagus ...    58   2e-07

>dbj|GBC44052.1| Tis13_26542: PROVISIONAL [Rhizophagus irregularis DAOM 181602]
          Length = 87

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 37/60 (61%), Positives = 41/60 (68%)
 Frame = -1

Query: 356 WNPTDEETKFTFQSGWKC*L*HRLCFQKFY*VRTQDSSWWILDKYSSLSPSFKLLIPKDT 177
           WNPTDEETKF         + + L   +   VRTQD  WWIL+KYSSLSPSFKLLIPKDT
Sbjct: 16  WNPTDEETKF---------IRNILLSNQ---VRTQDLPWWILEKYSSLSPSFKLLIPKDT 63


>gb|PKK64701.1| hypothetical protein RhiirC2_716090 [Rhizophagus irregularis]
          Length = 163

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 27/34 (79%), Positives = 31/34 (91%)
 Frame = -3

Query: 273 ILLGQDSGLFVVDSGQIQLTVPIFQTVNPKGYIT 172
           +L  QDSGL +VDSG+IQLTVPIFQTVNPKGYI+
Sbjct: 101 LLSNQDSGLSMVDSGKIQLTVPIFQTVNPKGYIS 134


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