BLASTX nr result

ID: Ophiopogon26_contig00053804 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053804
         (589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC31470.1| hypothetical protein RIR_1679000 [Rhizophagus ir...    55   6e-07

>dbj|GBC31470.1| hypothetical protein RIR_1679000 [Rhizophagus irregularis DAOM
           181602]
          Length = 85

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 36/74 (48%), Positives = 43/74 (58%), Gaps = 11/74 (14%)
 Frame = -1

Query: 370 MELVKCYIKCCYNNPDLERFISLFLGY-----LNGHKQR*GSKNVKNME------Y*HNN 224
           MEL+KCY     NNPDLERFISLFLGY     +N   +  G    ++        +  NN
Sbjct: 1   MELIKCY-----NNPDLERFISLFLGYPNSLGINPLTENDGPPTSRDRAAKMLRIWNINN 55

Query: 223 IAKYGTSTLLINVR 182
           +AKYG STLLIN R
Sbjct: 56  VAKYGISTLLINDR 69


Top