BLASTX nr result

ID: Ophiopogon26_contig00053638 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053638
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX55280.1| hypothetical protein RirG_226790 [Rhizophagus irr...    62   4e-10
gb|PKY56201.1| hypothetical protein RhiirA4_411031 [Rhizophagus ...    61   2e-09
gb|PKC57418.1| hypothetical protein RhiirA1_428506, partial [Rhi...    57   3e-08

>gb|EXX55280.1| hypothetical protein RirG_226790 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC35321.1| hypothetical protein RIR_1991100 [Rhizophagus irregularis DAOM
           181602]
 gb|PKB95428.1| hypothetical protein RhiirA5_507299 [Rhizophagus irregularis]
 gb|POG69728.1| hypothetical protein GLOIN_2v1623773 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 70

 Score = 62.4 bits (150), Expect = 4e-10
 Identities = 34/70 (48%), Positives = 36/70 (51%)
 Frame = -3

Query: 445 MSGDTLNAYXXXXXXXXXXXXXXXXXXXXLQSGREXXXXXXXXXXXLVFPVFGCLIYYFC 266
           MS +TLNAY                     QS RE           LVFPVFGCLIYYFC
Sbjct: 1   MSSNTLNAYIGGILGFIILILDLIAIFEIFQSDREPLWKFIWVVFILVFPVFGCLIYYFC 60

Query: 265 SNRDKYKSKH 236
           SNRDK+KSKH
Sbjct: 61  SNRDKHKSKH 70


>gb|PKY56201.1| hypothetical protein RhiirA4_411031 [Rhizophagus irregularis]
          Length = 70

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/70 (47%), Positives = 35/70 (50%)
 Frame = -3

Query: 445 MSGDTLNAYXXXXXXXXXXXXXXXXXXXXLQSGREXXXXXXXXXXXLVFPVFGCLIYYFC 266
           MS +TLNAY                     QS RE           LVFP FGCLIYYFC
Sbjct: 1   MSSNTLNAYIGGILGFIILILDLIAIFEIFQSDREPLWKFIWVVFILVFPAFGCLIYYFC 60

Query: 265 SNRDKYKSKH 236
           SNRDK+KSKH
Sbjct: 61  SNRDKHKSKH 70


>gb|PKC57418.1| hypothetical protein RhiirA1_428506, partial [Rhizophagus
           irregularis]
 gb|PKK77574.1| hypothetical protein RhiirC2_731621, partial [Rhizophagus
           irregularis]
 gb|PKY18920.1| hypothetical protein RhiirB3_406195, partial [Rhizophagus
           irregularis]
          Length = 68

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 32/68 (47%), Positives = 34/68 (50%)
 Frame = -3

Query: 445 MSGDTLNAYXXXXXXXXXXXXXXXXXXXXLQSGREXXXXXXXXXXXLVFPVFGCLIYYFC 266
           MS +TLNAY                     QS RE           LVFPVFGCLIYYFC
Sbjct: 1   MSSNTLNAYIGGILGFIILILDLIAIFEIFQSDREPLWKFIWVVFILVFPVFGCLIYYFC 60

Query: 265 SNRDKYKS 242
           SNRDK+KS
Sbjct: 61  SNRDKHKS 68


Top