BLASTX nr result
ID: Ophiopogon26_contig00053636
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00053636
(545 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKY58687.1| Diaminopimelate epimerase-like protein [Rhizophag... 84 5e-22
gb|EXX62146.1| hypothetical protein RirG_164520 [Rhizophagus irr... 83 1e-21
gb|POG58989.1| hypothetical protein GLOIN_2v1726081, partial [Rh... 54 2e-12
gb|PKY34058.1| Diaminopimelate epimerase-like protein [Rhizophag... 54 2e-12
gb|PKK57208.1| Diaminopimelate epimerase-like protein, partial [... 54 2e-12
gb|PKC55392.1| Diaminopimelate epimerase-like protein, partial [... 54 3e-09
>gb|PKY58687.1| Diaminopimelate epimerase-like protein [Rhizophagus irregularis]
Length = 297
Score = 84.3 bits (207), Expect(3) = 5e-22
Identities = 61/169 (36%), Positives = 82/169 (48%), Gaps = 50/169 (29%)
Frame = -3
Query: 417 IRCYHKLY-VEKIDSCLVLTKVYDEEHIPTQ---LRRPILCSLSEKVPGDGFCDN----- 265
IR +HK Y EKIDSCLVLTKV +EEHIPTQ L +L + PGDGFC N
Sbjct: 35 IRQHHKSYGFEKIDSCLVLTKVNNEEHIPTQLHDLNSVLLMRMYVYEPGDGFCGNGARAV 94
Query: 264 --------------FLSEMNGMNGMNEILNISLKWVNRNIMIQLLKKV------------ 163
F+ +G ++E+L + ++++ + +
Sbjct: 95 SKYCFHHYRKLYNQFIISTDGW--LHELLERGEDEQDVEYLVEMGESLYHDPAGDFIEKG 152
Query: 162 -----------NIAWYYVNTSEPHLITFDKIDNDELIRT----KQVPNR 61
N+ W+YVNTSEPHL+TFDKID+ ELIR Q PN+
Sbjct: 153 ILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPNK 201
Score = 35.4 bits (80), Expect(3) = 5e-22
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = -1
Query: 83 EPNKFPIGTNLNSGLIFDK--LRMLTFER 3
EPNKFPIG NLN L D+ + +LTFER
Sbjct: 198 EPNKFPIGINLNRVLNIDQSTINVLTFER 226
Score = 32.3 bits (72), Expect(3) = 5e-22
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 457 DYLDKYEHDFDES 419
DYLDKYEHDFDE+
Sbjct: 21 DYLDKYEHDFDEN 33
>gb|EXX62146.1| hypothetical protein RirG_164520 [Rhizophagus irregularis DAOM
197198w]
dbj|GBC15319.1| diaminopimelate epimerase [Rhizophagus irregularis DAOM 181602]
gb|PKB95472.1| Diaminopimelate epimerase-like protein [Rhizophagus irregularis]
Length = 300
Score = 82.8 bits (203), Expect(3) = 1e-21
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 53/172 (30%)
Frame = -3
Query: 417 IRCYHKLY-VEKIDSCLVLTKVYDEEHIPTQ---LRRPILCSLSEKVPGDGFCDN----- 265
IR +HK Y EKIDSCLVLTKV +EEHIPTQ L +L + PGDGFC N
Sbjct: 35 IRQHHKSYGFEKIDSCLVLTKVNNEEHIPTQLHDLNSVLLMRMYVYEPGDGFCGNGARAV 94
Query: 264 --------------FLSEMNGMNGMNEIL------------------------NISLKWV 199
F+ +G ++E+L + + ++
Sbjct: 95 SKYCFHHYRKLYNQFIISTDGW--LHELLERGEHEQDEQDVEYLVEMGESLYHDPAGDFI 152
Query: 198 NRNIMIQLLKKV--NIAWYYVNTSEPHLITFDKIDNDELIRT----KQVPNR 61
+ I+ + K + N+ W+YVNTSEPHL+TFDKID+ ELIR Q PN+
Sbjct: 153 EKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPNK 204
Score = 35.4 bits (80), Expect(3) = 1e-21
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = -1
Query: 83 EPNKFPIGTNLNSGLIFDK--LRMLTFER 3
EPNKFPIG NLN L D+ + +LTFER
Sbjct: 201 EPNKFPIGINLNRVLNIDQSTINVLTFER 229
Score = 32.3 bits (72), Expect(3) = 1e-21
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -2
Query: 457 DYLDKYEHDFDES 419
DYLDKYEHDFDE+
Sbjct: 21 DYLDKYEHDFDEN 33
>gb|POG58989.1| hypothetical protein GLOIN_2v1726081, partial [Rhizophagus
irregularis DAOM 181602=DAOM 197198]
Length = 225
Score = 53.5 bits (127), Expect(3) = 2e-12
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 4/38 (10%)
Frame = -3
Query: 162 NIAWYYVNTSEPHLITFDKIDNDELIRT----KQVPNR 61
N+ W+YVNTSEPHL+TFDKID+ ELIR Q PN+
Sbjct: 93 NVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPNK 130
Score = 35.4 bits (80), Expect(3) = 2e-12
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = -1
Query: 83 EPNKFPIGTNLNSGLIFDK--LRMLTFER 3
EPNKFPIG NLN L D+ + +LTFER
Sbjct: 127 EPNKFPIGINLNRVLNIDQSTINVLTFER 155
Score = 30.4 bits (67), Expect(3) = 2e-12
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -2
Query: 235 NERNFEYLVEMGKSQYHD 182
+E++ EYLVEMG+S YHD
Sbjct: 55 DEQDVEYLVEMGESLYHD 72
>gb|PKY34058.1| Diaminopimelate epimerase-like protein [Rhizophagus irregularis]
Length = 224
Score = 53.5 bits (127), Expect(3) = 2e-12
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 4/38 (10%)
Frame = -3
Query: 162 NIAWYYVNTSEPHLITFDKIDNDELIRT----KQVPNR 61
N+ W+YVNTSEPHL+TFDKID+ ELIR Q PN+
Sbjct: 91 NVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPNK 128
Score = 35.4 bits (80), Expect(3) = 2e-12
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = -1
Query: 83 EPNKFPIGTNLNSGLIFDK--LRMLTFER 3
EPNKFPIG NLN L D+ + +LTFER
Sbjct: 125 EPNKFPIGINLNRVLNIDQSTINVLTFER 153
Score = 30.4 bits (67), Expect(3) = 2e-12
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -2
Query: 235 NERNFEYLVEMGKSQYHD 182
+E++ EYLVEMG+S YHD
Sbjct: 53 DEQDVEYLVEMGESLYHD 70
>gb|PKK57208.1| Diaminopimelate epimerase-like protein, partial [Rhizophagus
irregularis]
Length = 223
Score = 53.5 bits (127), Expect(3) = 2e-12
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 4/38 (10%)
Frame = -3
Query: 162 NIAWYYVNTSEPHLITFDKIDNDELIRT----KQVPNR 61
N+ W+YVNTSEPHL+TFDKID+ ELIR Q PN+
Sbjct: 91 NVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPNK 128
Score = 35.4 bits (80), Expect(3) = 2e-12
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = -1
Query: 83 EPNKFPIGTNLNSGLIFDK--LRMLTFER 3
EPNKFPIG NLN L D+ + +LTFER
Sbjct: 125 EPNKFPIGINLNRVLNIDQSTINVLTFER 153
Score = 30.4 bits (67), Expect(3) = 2e-12
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -2
Query: 235 NERNFEYLVEMGKSQYHD 182
+E++ EYLVEMG+S YHD
Sbjct: 53 DEQDVEYLVEMGESLYHD 70
>gb|PKC55392.1| Diaminopimelate epimerase-like protein, partial [Rhizophagus
irregularis]
Length = 161
Score = 53.5 bits (127), Expect(2) = 3e-09
Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 4/38 (10%)
Frame = -3
Query: 162 NIAWYYVNTSEPHLITFDKIDNDELIRT----KQVPNR 61
N+ W+YVNTSEPHL+TFDKID+ ELIR Q PN+
Sbjct: 29 NVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPNK 66
Score = 35.4 bits (80), Expect(2) = 3e-09
Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = -1
Query: 83 EPNKFPIGTNLNSGLIFDK--LRMLTFER 3
EPNKFPIG NLN L D+ + +LTFER
Sbjct: 63 EPNKFPIGINLNRVLNIDQSTINVLTFER 91