BLASTX nr result

ID: Ophiopogon26_contig00053599 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053599
         (359 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC18856.1| Tis13_208564 [Rhizophagus irregularis DAOM 181602]     42   9e-08

>dbj|GBC18856.1| Tis13_208564 [Rhizophagus irregularis DAOM 181602]
          Length = 100

 Score = 42.4 bits (98), Expect(2) = 9e-08
 Identities = 23/35 (65%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
 Frame = +3

Query: 117 MRINYILVGF---ARKNISNGSTLTIIRRNMQTIC 212
           MRINYILVGF   ARKNI+NGSTL II      +C
Sbjct: 1   MRINYILVGFFDNARKNITNGSTLKIIGGFCNVVC 35



 Score = 41.6 bits (96), Expect(2) = 9e-08
 Identities = 24/44 (54%), Positives = 25/44 (56%)
 Frame = +1

Query: 226 KIWEL*NIVGNRINCFHFVSIFELR**FLSKCLKFFIRIKSYFA 357
           KIWE       R    HF+SI      FLSKCL  FIRIKSYFA
Sbjct: 36  KIWE-------RQKYIHFISILSYANNFLSKCLIIFIRIKSYFA 72


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