BLASTX nr result

ID: Ophiopogon26_contig00053539 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053539
         (493 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020270858.1| uncharacterized protein LOC109846046 [Aspara...    65   2e-13
ref|XP_020241600.1| uncharacterized protein LOC109819985 [Aspara...    67   4e-10
gb|AAO37473.1| putative reverse transcriptase [Oryza sativa Japo...    51   4e-07
ref|XP_010250349.1| PREDICTED: uncharacterized protein LOC104592...    55   3e-06
gb|AQK60169.1| hypothetical protein ZEAMMB73_Zm00001d053698 [Zea...    56   4e-06

>ref|XP_020270858.1| uncharacterized protein LOC109846046 [Asparagus officinalis]
          Length = 587

 Score = 65.5 bits (158), Expect(2) = 2e-13
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = -1

Query: 478 EFEDVIREVEIMEVHMGGKSFTWTNK*SMSYLAKLDRVFIYSSLEEYYPTTVVQDLASLI 299
           EF DVI E+E+++  + G+ FTW+NK     +A+LDRVF  S  E+ +P +  Q L+S +
Sbjct: 3   EFNDVINELELIDSPLHGRKFTWSNKRMSPSMARLDRVFFNSDWEDIFPFSKQQGLSSQL 62

Query: 298 SYRALIKLDVDFEFSRQNIFRFEKMRLEDKKLCKLIPV 185
           S  A I  D          FRFE + L  ++    +PV
Sbjct: 63  SDHAPISFDFGDTQCYVKKFRFENIWLRSEEFINNVPV 100



 Score = 37.4 bits (85), Expect(2) = 2e-13
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -2

Query: 171 ASKKTGAVDNLVSKLKDIRKQYKEWSKLKFDNI-TKTKELPNKILRWDVIEVARVLS 4
           A     A  N+V KL+ +RK  K+W    F ++  + K+L + +L W+V+E  R LS
Sbjct: 105 APSSGSAAKNIVGKLRFMRKCIKQWMHSNFHSVRQQKKDLLDNLLTWEVLEENRDLS 161


>ref|XP_020241600.1| uncharacterized protein LOC109819985 [Asparagus officinalis]
          Length = 286

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 36/98 (36%), Positives = 54/98 (55%)
 Frame = -1

Query: 478 EFEDVIREVEIMEVHMGGKSFTWTNK*SMSYLAKLDRVFIYSSLEEYYPTTVVQDLASLI 299
           EF D+I E+E+++  + G+ FTW+NK     +A+LDRVF  S  E+++P +  Q L+S +
Sbjct: 161 EFNDIINELELIDSPLHGRKFTWSNKRRSPSMARLDRVFFNSDWEDFFPFSKQQGLSSQL 220

Query: 298 SYRALIKLDVDFEFSRQNIFRFEKMRLEDKKLCKLIPV 185
           S  A I  D          FRFEK+ L        +PV
Sbjct: 221 SDHAPISFDFGDNQCYVKKFRFEKIWLRSDDFLYKVPV 258


>gb|AAO37473.1| putative reverse transcriptase [Oryza sativa Japonica Group]
 gb|AAS01922.1| retrotransposon protein, putative, LINE sub-class [Oryza sativa
           Japonica Group]
 gb|ABF96965.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 353

 Score = 51.2 bits (121), Expect(2) = 4e-07
 Identities = 27/91 (29%), Positives = 46/91 (50%)
 Frame = -1

Query: 487 DTLEFEDVIREVEIMEVHMGGKSFTWTNK*SMSYLAKLDRVFIYSSLEEYYPTTVVQDLA 308
           D + F  +I  + ++E+ + G+SFTW+N      L +LD  F   S    +P T+V+ L 
Sbjct: 56  DMMIFNSIISNLGLLELPLKGRSFTWSNMQDCPLLQQLDWFFTTVSWSASFPKTMVKPLT 115

Query: 307 SLISYRALIKLDVDFEFSRQNIFRFEKMRLE 215
            LIS      + +     + ++FRFE   +E
Sbjct: 116 RLISDHVPCVVQIGTSIPKADLFRFENFWIE 146



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2

Query: 177 NHASKKTGAVDNLVSKLKDIRKQYKEWSK 91
           N+    T A  NL +K K +RK  K+WSK
Sbjct: 159 NNHGDSTDAAKNLTAKFKSLRKGLKKWSK 187


>ref|XP_010250349.1| PREDICTED: uncharacterized protein LOC104592599 [Nelumbo nucifera]
          Length = 361

 Score = 55.1 bits (131), Expect(2) = 3e-06
 Identities = 30/95 (31%), Positives = 51/95 (53%)
 Frame = -1

Query: 475 FEDVIREVEIMEVHMGGKSFTWTNK*SMSYLAKLDRVFIYSSLEEYYPTTVVQDLASLIS 296
           F D I  +E+M++ + G  FTWTN  S+  L +LDR  + S+ +E++P      L   +S
Sbjct: 37  FADFINSMELMDIPIQGNRFTWTNNQSVPTLVRLDRFLVSSNWDEFFPDFRQLTLPRPMS 96

Query: 295 YRALIKLDVDFEFSRQNIFRFEKMRLEDKKLCKLI 191
             + I+L      + ++ F+FE    E++ L  LI
Sbjct: 97  DHSFIQLVCGLRETVKSPFKFENAWFEEENLIPLI 131



 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 141 LVSKLKDIRKQYKEWSKLK-FDNITKTKELPNKILRWDVIE 22
           + SKLK ++ + K WSK K    +T  K L + I+  D  E
Sbjct: 148 MASKLKAVKXKLKIWSKEKNMKWVTDKKALLSTIVEIDRAE 188


>gb|AQK60169.1| hypothetical protein ZEAMMB73_Zm00001d053698 [Zea mays]
          Length = 1118

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/82 (32%), Positives = 48/82 (58%)
 Frame = -1

Query: 475 FEDVIREVEIMEVHMGGKSFTWTNK*SMSYLAKLDRVFIYSSLEEYYPTTVVQDLASLIS 296
           F  ++ E+E++E+ + G+ FTW+N+     L +LDRVF+ +  ++ +P  ++Q LAS IS
Sbjct: 5   FRRLLNELELVEIDLLGRQFTWSNEREAPTLVRLDRVFVTTDWDQLFPDCILQALASSIS 64

Query: 295 YRALIKLDVDFEFSRQNIFRFE 230
               + L +   F  +  F FE
Sbjct: 65  DHCPLLLGLRDSFMGKRRFHFE 86


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