BLASTX nr result

ID: Ophiopogon26_contig00053518 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053518
         (482 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC52101.1| hypothetical protein RIR_3351400 [Rhizophagus ir...    74   1e-14

>dbj|GBC52101.1| hypothetical protein RIR_3351400 [Rhizophagus irregularis DAOM
           181602]
          Length = 107

 Score = 73.6 bits (179), Expect(2) = 1e-14
 Identities = 41/74 (55%), Positives = 47/74 (63%), Gaps = 13/74 (17%)
 Frame = +2

Query: 26  ILLKEILSYQTFRFSSQYPPPVSTQYPN-------------NRKRIWSHLERGSGKDQKR 166
           ILLKEIL Y+TFRFSSQ    +     +              RKRIWS+LERGSGKDQ+R
Sbjct: 13  ILLKEILGYKTFRFSSQISSSIFVTVSSLHRHKIIIEDDAHYRKRIWSYLERGSGKDQRR 72

Query: 167 ITIVGRGETHIHIV 208
           ITIVGRGET +  V
Sbjct: 73  ITIVGRGETRMRTV 86



 Score = 33.9 bits (76), Expect(2) = 1e-14
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 213 LNLEAEDKIAFWMIIN 260
           LNLE +DKIAFWMIIN
Sbjct: 92  LNLETDDKIAFWMIIN 107


Top