BLASTX nr result

ID: Ophiopogon26_contig00053175 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053175
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020272290.1| RING-H2 finger protein ATL66-like [Asparagus...    61   6e-09
ref|XP_022884551.1| E3 ubiquitin-protein ligase RING1-like [Olea...    55   5e-06

>ref|XP_020272290.1| RING-H2 finger protein ATL66-like [Asparagus officinalis]
          Length = 180

 Score = 61.2 bits (147), Expect = 6e-09
 Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
 Frame = -1

Query: 388 FHVSCVDKWLRSSSKCPVCRADVLSDD---NNLQLSGMGTNSLETLPVER*TSSGNC 227
           FHVSCVD WLRSSS CP+CR +VL DD   ++L  SG    ++ETLP E  T    C
Sbjct: 111 FHVSCVDIWLRSSSSCPLCRNNVLKDDGSSSSLPGSGTAIRAMETLPREEPTQGTAC 167


>ref|XP_022884551.1| E3 ubiquitin-protein ligase RING1-like [Olea europaea var.
           sylvestris]
          Length = 390

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = -1

Query: 388 FHVSCVDKWLRSSSKCPVCRADVLSDDNNLQLSGMGTNSLETLPVE 251
           FHV C+D WLRS   CPVCRA ++S+ N+  +S + TNS +  P E
Sbjct: 168 FHVPCIDTWLRSHQNCPVCRAPIVSNTNSAPVSSVLTNSNDLAPRE 213


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