BLASTX nr result

ID: Ophiopogon26_contig00053090 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053090
         (849 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY42227.1| hypothetical protein RhiirA4_540242 [Rhizophagus ...    96   3e-27
gb|PKC71267.1| hypothetical protein RhiirA1_74901 [Rhizophagus i...    64   8e-10

>gb|PKY42227.1| hypothetical protein RhiirA4_540242 [Rhizophagus irregularis]
          Length = 293

 Score = 95.5 bits (236), Expect(2) = 3e-27
 Identities = 46/54 (85%), Positives = 49/54 (90%)
 Frame = +2

Query: 239 GRYMLKYNLVKGQRKALGHRIDGIFQNTVNNNEYEGIEVAKTCQGPHDRNLRNS 400
           G + L+  L KGQRKALGHRIDGIFQNTV+NNEYEGIEVAKTCQGPHDRNLRNS
Sbjct: 241 GTFKLR-RLSKGQRKALGHRIDGIFQNTVDNNEYEGIEVAKTCQGPHDRNLRNS 293



 Score = 55.8 bits (133), Expect(2) = 3e-27
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +1

Query: 49  YVADYNMLNPKKKSNVHARKVPAKFKGFPIMIGYGTFKL 165
           Y +      P+KKS+VHARKV AKFKGF ++IGYGTFKL
Sbjct: 207 YSSSLQYAKPEKKSDVHARKVSAKFKGFSVIIGYGTFKL 245


>gb|PKC71267.1| hypothetical protein RhiirA1_74901 [Rhizophagus irregularis]
          Length = 61

 Score = 63.9 bits (154), Expect = 8e-10
 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = -3

Query: 379 MRTLACFRDFNSFIFIIIDCVLKNSINTVSKCLSLALY*II-FQHIPTQFGIL 224
           MRTLACFRDFNSFIFIIIDCVLK  I ++ +C S  L+    FQHIP QFGIL
Sbjct: 1   MRTLACFRDFNSFIFIIIDCVLK--IPSI-RCPSAFLWPFTKFQHIPIQFGIL 50


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