BLASTX nr result

ID: Ophiopogon26_contig00053066 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00053066
         (793 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX52670.1| Yth1p [Rhizophagus irregularis DAOM 197198w]           160   4e-42
dbj|GBC25315.1| zinc finger ccch domain-containing protein [Rhiz...    92   8e-18

>gb|EXX52670.1| Yth1p [Rhizophagus irregularis DAOM 197198w]
          Length = 512

 Score =  160 bits (404), Expect = 4e-42
 Identities = 127/315 (40%), Positives = 151/315 (47%), Gaps = 62/315 (19%)
 Frame = -1

Query: 760 YMNTR---YNTGTRXXXXXXXXXXXXXXXXTMAPRKTSYSLDLRKSTSYNMNARAAAP-- 596
           YM TR   YN GTR                TM PRKTSY+LDLRK T+Y+MN RAA P  
Sbjct: 3   YMYTRSAIYNVGTRSSTYNKTATYNTNARSTMVPRKTSYNLDLRKPTTYDMNTRAATPYN 62

Query: 595 ----------SSKVPCQA-----------TTAYQIALSNSTVPNQIAAGTNTTQTDYGTN 479
                     +SK   Q            TT YQ++LSNSTVPNQ+A     T       
Sbjct: 63  AASSTGMGKTTSKTLYQVASNKSLSKPTETTTYQMSLSNSTVPNQVAGTQKYT------- 115

Query: 478 ANSVAYNVGTRQLEYNLPSVTLDFDAIAKLIAPQQVIYNMSTGEASVVNNQKATSITTRP 299
            NS+AYN+GTRQLEY L       D IAKLIAPQQ IYN+STG ASV+ NQKA S  TRP
Sbjct: 116 -NSIAYNLGTRQLEYGLT-----LDTIAKLIAPQQEIYNVSTGAASVI-NQKAISTATRP 168

Query: 298 SDSQIP-FNTNAEXXXXXXXXXXXXXSLMLRPTAQKEA-----------PTKPSECQIPA 155
           S+SQ+P FN  AE              ++ RP+  + +             KPSECQI  
Sbjct: 169 SNSQMPSFNRTAE----------STTPIISRPSDSQNSNKVLEKKALSVTMKPSECQIST 218

Query: 154 I------IKSTAKELP------------------XXXXXXXXXXXXXXINNMASFKTPPS 47
           +      +KST  +LP                                 NNM S  +P S
Sbjct: 219 LSTDAKYVKSTTTKLPPSSTSSTSSTSSISSTSSTTNTKQLSLQISASTNNMTS--SPTS 276

Query: 46  GKFARPATPKPASNA 2
           G+FARP TPK ASN+
Sbjct: 277 GRFARPTTPKSASNS 291


>dbj|GBC25315.1| zinc finger ccch domain-containing protein [Rhizophagus irregularis
           DAOM 181602]
          Length = 396

 Score = 92.4 bits (228), Expect = 8e-18
 Identities = 83/234 (35%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
 Frame = -1

Query: 760 YMNTR---YNTGTRXXXXXXXXXXXXXXXXTMAPRKTSYSLDLRKSTSYNMNARAAAPSS 590
           YM TR   YN GTR                TM PRKTSY+LDLRK T+Y+MN RAA P  
Sbjct: 3   YMYTRSAIYNVGTRSSTYNKTATYNTNARSTMVPRKTSYNLDLRKPTTYDMNTRAATP-- 60

Query: 589 KVPCQATTAYQIALSNSTVPNQIAAGTNTTQTDYGTNAN-SVAYNVGTRQLEYNLPSVTL 413
                    Y  A S          G  T++T Y   +N S++    T   + +L + T+
Sbjct: 61  ---------YNAASSTGM-------GKTTSKTLYQVASNKSLSKPTETTTYQMSLSNSTV 104

Query: 412 DFDAIAKLIAPQQVIYNMSTGEASVVNNQKATSITTRPSDSQIP-FNTNAEXXXXXXXXX 236
                     P Q IYN+STG ASV+ NQKA S  TRPS+SQ+P FN  AE         
Sbjct: 105 ----------PNQEIYNVSTGAASVI-NQKAISTATRPSNSQMPSFNRTAE--------- 144

Query: 235 XXXXSLMLRPTAQKEA-----------PTKPSECQIPAI------IKSTAKELP 125
                ++ RP+  + +             KPSECQI  +      +KST  +LP
Sbjct: 145 -STTPIISRPSDSQNSNKVLEKKALSVTMKPSECQISTLSTDAKYVKSTTTKLP 197


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