BLASTX nr result

ID: Ophiopogon26_contig00052756 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00052756
         (413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK81585.1| uncharacterized protein A4U43_C01F30820 [Asparagu...    62   2e-08

>gb|ONK81585.1| uncharacterized protein A4U43_C01F30820 [Asparagus officinalis]
          Length = 446

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
 Frame = +2

Query: 8   MCLKDLTSCFGSPAVD--SPDRHRTSHENRHDEEGLNPKLLKSGNKGKHESP------KR 163
           MCLK+L  CFGS  +D  SPDRH +  E   ++E  +PK   S +  K  S       K 
Sbjct: 1   MCLKEL--CFGSRKMDLRSPDRHHSEAEKHRNDEVSSPKRQSSSDDPKKSSKPADTNGKV 58

Query: 164 ASDGSDSIFGSQPYPKDSNGEAAANSPRDDNEGESTKKATQVSAFPENRGANSYTHPQET 343
           AS  S   +G +P P         +SP+   E ES K         +N G +S T  Q  
Sbjct: 59  ASHTSPKFYGGKPEPPKVPTTEGMSSPKAVEEDESPK--------VKNSGVDSRTQAQPN 110

Query: 344 TPKDVRSRSPVKRDNGSSGG 403
             K+V SR+ V+ +N  + G
Sbjct: 111 NSKEVTSRNVVETNNCVTDG 130


Top