BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00052203
         (515 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC55392.1| Diaminopimelate epimerase-like protein, partial [...   209   2e-66
gb|PKK57208.1| Diaminopimelate epimerase-like protein, partial [...   209   2e-65
gb|PKY34058.1| Diaminopimelate epimerase-like protein [Rhizophag...   209   2e-65
gb|POG58989.1| hypothetical protein GLOIN_2v1726081, partial [Rh...   209   2e-65
gb|PKY58687.1| Diaminopimelate epimerase-like protein [Rhizophag...   209   2e-64
gb|EXX62146.1| hypothetical protein RirG_164520 [Rhizophagus irr...   209   2e-64
dbj|GAK61431.1| diaminopimelate epimerase [Candidatus Vecturithr...   100   2e-22
dbj|GAK54644.1| diaminopimelate epimerase [Candidatus Moduliflex...    89   3e-18
gb|OGN55151.1| hypothetical protein A2098_04025 [Chlamydiae bact...    84   2e-16
gb|OGN53134.1| hypothetical protein A2Z85_02740 [Chlamydiae bact...    84   2e-16
ref|WP_031932962.1| diaminopimelate epimerase [Brevibacillus bor...    80   5e-15
ref|WP_094083608.1| diaminopimelate epimerase [Prosthecochloris ...    80   6e-15
ref|WP_079588552.1| diaminopimelate epimerase [Acetoanaerobium n...    79   1e-14
ref|WP_013362075.1| diaminopimelate epimerase [[Clostridium] sti...    79   1e-14
ref|WP_048150701.1| diaminopimelate epimerase [Methanolacinia pa...    79   2e-14
ref|WP_067321038.1| diaminopimelate epimerase [Streptobacillus f...    79   2e-14
ref|WP_068866108.1| diaminopimelate epimerase [Prosthecochloris ...    78   3e-14
ref|WP_059139302.1| diaminopimelate epimerase [Chlorobium limico...    78   3e-14
ref|WP_077846395.1| diaminopimelate epimerase [Clostridium punic...    78   4e-14
ref|WP_035979066.1| diaminopimelate epimerase [Brevibacillus bor...    78   4e-14

>gb|PKC55392.1| Diaminopimelate epimerase-like protein, partial [Rhizophagus
           irregularis]
          Length = 161

 Score =  209 bits (531), Expect = 2e-66
 Identities = 104/149 (69%), Positives = 123/149 (82%)
 Frame = -3

Query: 513 YNDSAGDFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQD 334
           Y+D AGDFI+KGILD E KF+  +VT +YV TSEPHLVTF++I +++LI IG+S NQ+ +
Sbjct: 6   YHDPAGDFIEKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPN 65

Query: 333 KFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVT 154
           KFPIGINLNRV   D+STINVLTFERGINRLT ACGSGSTS VAL+K LG IDQA+SKVT
Sbjct: 66  KFPIGINLNRVLNIDQSTINVLTFERGINRLTPACGSGSTSSVALAKRLGFIDQAVSKVT 125

Query: 153 VNTRGGDLVVFNENDKIYLSGPCSVKGLD 67
           V  RGG L V NE  K+YLSGPC V+G+D
Sbjct: 126 VKVRGGHLTVINEKGKVYLSGPCLVEGID 154


>gb|PKK57208.1| Diaminopimelate epimerase-like protein, partial [Rhizophagus
           irregularis]
          Length = 223

 Score =  209 bits (531), Expect = 2e-65
 Identities = 104/149 (69%), Positives = 123/149 (82%)
 Frame = -3

Query: 513 YNDSAGDFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQD 334
           Y+D AGDFI+KGILD E KF+  +VT +YV TSEPHLVTF++I +++LI IG+S NQ+ +
Sbjct: 68  YHDPAGDFIEKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPN 127

Query: 333 KFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVT 154
           KFPIGINLNRV   D+STINVLTFERGINRLT ACGSGSTS VAL+K LG IDQA+SKVT
Sbjct: 128 KFPIGINLNRVLNIDQSTINVLTFERGINRLTPACGSGSTSSVALAKRLGFIDQAVSKVT 187

Query: 153 VNTRGGDLVVFNENDKIYLSGPCSVKGLD 67
           V  RGG L V NE  K+YLSGPC V+G+D
Sbjct: 188 VKVRGGHLTVINEKGKVYLSGPCLVEGID 216


>gb|PKY34058.1| Diaminopimelate epimerase-like protein [Rhizophagus irregularis]
          Length = 224

 Score =  209 bits (531), Expect = 2e-65
 Identities = 104/149 (69%), Positives = 123/149 (82%)
 Frame = -3

Query: 513 YNDSAGDFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQD 334
           Y+D AGDFI+KGILD E KF+  +VT +YV TSEPHLVTF++I +++LI IG+S NQ+ +
Sbjct: 68  YHDPAGDFIEKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPN 127

Query: 333 KFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVT 154
           KFPIGINLNRV   D+STINVLTFERGINRLT ACGSGSTS VAL+K LG IDQA+SKVT
Sbjct: 128 KFPIGINLNRVLNIDQSTINVLTFERGINRLTPACGSGSTSSVALAKRLGFIDQAVSKVT 187

Query: 153 VNTRGGDLVVFNENDKIYLSGPCSVKGLD 67
           V  RGG L V NE  K+YLSGPC V+G+D
Sbjct: 188 VKVRGGHLTVINEKGKVYLSGPCLVEGID 216


>gb|POG58989.1| hypothetical protein GLOIN_2v1726081, partial [Rhizophagus
           irregularis DAOM 181602=DAOM 197198]
          Length = 225

 Score =  209 bits (531), Expect = 2e-65
 Identities = 104/149 (69%), Positives = 123/149 (82%)
 Frame = -3

Query: 513 YNDSAGDFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQD 334
           Y+D AGDFI+KGILD E KF+  +VT +YV TSEPHLVTF++I +++LI IG+S NQ+ +
Sbjct: 70  YHDPAGDFIEKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPN 129

Query: 333 KFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVT 154
           KFPIGINLNRV   D+STINVLTFERGINRLT ACGSGSTS VAL+K LG IDQA+SKVT
Sbjct: 130 KFPIGINLNRVLNIDQSTINVLTFERGINRLTPACGSGSTSSVALAKRLGFIDQAVSKVT 189

Query: 153 VNTRGGDLVVFNENDKIYLSGPCSVKGLD 67
           V  RGG L V NE  K+YLSGPC V+G+D
Sbjct: 190 VKVRGGHLTVINEKGKVYLSGPCLVEGID 218


>gb|PKY58687.1| Diaminopimelate epimerase-like protein [Rhizophagus irregularis]
          Length = 297

 Score =  209 bits (531), Expect = 2e-64
 Identities = 104/149 (69%), Positives = 123/149 (82%)
 Frame = -3

Query: 513 YNDSAGDFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQD 334
           Y+D AGDFI+KGILD E KF+  +VT +YV TSEPHLVTF++I +++LI IG+S NQ+ +
Sbjct: 141 YHDPAGDFIEKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPN 200

Query: 333 KFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVT 154
           KFPIGINLNRV   D+STINVLTFERGINRLT ACGSGSTS VAL+K LG IDQA+SKVT
Sbjct: 201 KFPIGINLNRVLNIDQSTINVLTFERGINRLTPACGSGSTSSVALAKRLGFIDQAVSKVT 260

Query: 153 VNTRGGDLVVFNENDKIYLSGPCSVKGLD 67
           V  RGG L V NE  K+YLSGPC V+G+D
Sbjct: 261 VKVRGGHLTVINEKGKVYLSGPCLVEGID 289


>gb|EXX62146.1| hypothetical protein RirG_164520 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC15319.1| diaminopimelate epimerase [Rhizophagus irregularis DAOM 181602]
 gb|PKB95472.1| Diaminopimelate epimerase-like protein [Rhizophagus irregularis]
          Length = 300

 Score =  209 bits (531), Expect = 2e-64
 Identities = 104/149 (69%), Positives = 123/149 (82%)
 Frame = -3

Query: 513 YNDSAGDFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQD 334
           Y+D AGDFI+KGILD E KF+  +VT +YV TSEPHLVTF++I +++LI IG+S NQ+ +
Sbjct: 144 YHDPAGDFIEKGILDKEGKFIHSNVTWHYVNTSEPHLVTFDKIDDKELIRIGSSFNQEPN 203

Query: 333 KFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVT 154
           KFPIGINLNRV   D+STINVLTFERGINRLT ACGSGSTS VAL+K LG IDQA+SKVT
Sbjct: 204 KFPIGINLNRVLNIDQSTINVLTFERGINRLTPACGSGSTSSVALAKRLGFIDQAVSKVT 263

Query: 153 VNTRGGDLVVFNENDKIYLSGPCSVKGLD 67
           V  RGG L V NE  K+YLSGPC V+G+D
Sbjct: 264 VKVRGGHLTVINEKGKVYLSGPCLVEGID 292


>dbj|GAK61431.1| diaminopimelate epimerase [Candidatus Vecturithrix granuli]
          Length = 286

 Score =  100 bits (248), Expect = 2e-22
 Identities = 56/130 (43%), Positives = 85/130 (65%), Gaps = 3/130 (2%)
 Frame = -3

Query: 459 KFVIDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQ-DKFPIGINLNRVSIRDES 283
           +F   D+  Y+  TSEPHLV F+ +  E+  + G  +N ++ D FP+GIN+N++S+ D +
Sbjct: 155 RFQNKDLLCYFTETSEPHLVLFDSLSSEEFTAFGAYVNNERRDFFPLGININQISVLDPT 214

Query: 282 TINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVV-FN-END 109
           TI V T+ERG+NR+T ACG+GSTS   L   LG + Q+M+ + V T GG LV+ +N + +
Sbjct: 215 TIAVQTYERGVNRITQACGTGSTSSAVLCYLLGKV-QSMN-IHVQTSGGALVIAYNAQQN 272

Query: 108 KIYLSGPCSV 79
           +  L GP  V
Sbjct: 273 RSVLQGPARV 282


>dbj|GAK54644.1| diaminopimelate epimerase [Candidatus Moduliflexus flocculans]
          Length = 298

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 51/123 (41%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
 Frame = -3

Query: 438 TLYYVYTSEPHLVTFEQIPEEKLISIGNSLN-QDQDKFPIGINLNRVSIRDESTINVLTF 262
           +LY+  T EPH + F  +  E+L ++G  LN + +  FP GINLN V+I DE+TI V T+
Sbjct: 169 SLYFAQTGEPHFICFAALSHEELTALGQLLNTRYRSHFPHGINLNAVTIVDEATIAVRTY 228

Query: 261 ERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVV-FNENDK-IYLSGP 88
           ERG+N +T++CG+G+     +S   G I   +  VTV   GG+LVV +  +++ + LSGP
Sbjct: 229 ERGVNHITMSCGTGAACSARISLLRGVISSLV--VTVKMDGGELVVEYRPHERHLLLSGP 286

Query: 87  CSV 79
             V
Sbjct: 287 AHV 289


>gb|OGN55151.1| hypothetical protein A2098_04025 [Chlamydiae bacterium GWF2_49_8]
          Length = 279

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
 Frame = -3

Query: 429 YVYTSEPHLVTFEQIPEEKLISIGNSLNQDQDKFPIGINLNRVSIRDESTINVLTFERGI 250
           Y    EPHLV    + +E+L SIG  LN  ++ FP+GIN+N    ++++ I V T+ERG+
Sbjct: 158 YAEAIEPHLVILGSLTDEELFSIGKKLNLRKELFPLGINVNGCQEKEKNRITVKTYERGV 217

Query: 249 NRLTLACGSGS--TSCVALSKHLGHIDQAMSKVTVNTRGGDLVVFNENDKIYLSGPCSVK 76
            RLTL+CG+GS  +S + L    G I        V T GGDL +    + + L GP  ++
Sbjct: 218 QRLTLSCGTGSSCSSTIFLRGESGSIH-------VATPGGDLEITISEEGLELKGPAHIE 270

Query: 75  G 73
           G
Sbjct: 271 G 271


>gb|OGN53134.1| hypothetical protein A2Z85_02740 [Chlamydiae bacterium GWA2_50_15]
 gb|OGN54199.1| hypothetical protein A2Y28_02900 [Chlamydiae bacterium GWC2_50_10]
 gb|OGN58383.1| hypothetical protein A3D18_03805 [Chlamydiae bacterium
           RIFCSPHIGHO2_02_FULL_49_29]
 gb|OGN70058.1| hypothetical protein A3I15_02105 [Chlamydiae bacterium
           RIFCSPLOWO2_02_FULL_49_12]
 gb|OGN74674.1| hypothetical protein A3G30_00965 [Chlamydiae bacterium
           RIFCSPLOWO2_12_FULL_49_12]
          Length = 279

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 2/121 (1%)
 Frame = -3

Query: 429 YVYTSEPHLVTFEQIPEEKLISIGNSLNQDQDKFPIGINLNRVSIRDESTINVLTFERGI 250
           Y    EPHLV    + +E+L SIG  LN  ++ FP+GIN+N    ++++ I V T+ERG+
Sbjct: 158 YAEAIEPHLVILGSLTDEELFSIGKKLNLRKELFPLGINVNGCQEKEKNRITVKTYERGV 217

Query: 249 NRLTLACGSGS--TSCVALSKHLGHIDQAMSKVTVNTRGGDLVVFNENDKIYLSGPCSVK 76
            RLTL+CG+GS  +S + L    G I        V T GGDL +    + + L GP  ++
Sbjct: 218 QRLTLSCGTGSSCSSTIFLRGESGSIH-------VATPGGDLEITISEEGLELKGPAHIE 270

Query: 75  G 73
           G
Sbjct: 271 G 271


>ref|WP_031932962.1| diaminopimelate epimerase [Brevibacillus borstelensis]
 gb|KKX54230.1| hypothetical protein X546_17600 [Brevibacillus borstelensis
           cifa_chp40]
          Length = 279

 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
 Frame = -3

Query: 432 YYVYTSEPHLVTF----EQIPEEKLISIGNSLNQDQDKFPIGINLNRVSIRDESTINVLT 265
           ++     PH V F    E++ +E++I+ G ++  D   FP G+N+N V I DE+ + + T
Sbjct: 144 HFAVVGVPHTVWFVADTEEMSDEQVIAWGKAIRYDHSIFPDGVNVNFVQIADENKLKIRT 203

Query: 264 FERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVV 124
           +ERG+ R TLACGSG+T+    S  LG +    S VTV TRGG+L V
Sbjct: 204 YERGVERETLACGSGATASAITSSLLGLV---ASPVTVLTRGGELRV 247


>ref|WP_094083608.1| diaminopimelate epimerase [Prosthecochloris sp. GSB1]
 gb|ASQ91562.1| diaminopimelate epimerase [Prosthecochloris sp. GSB1]
          Length = 267

 Score = 80.1 bits (196), Expect = 6e-15
 Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
 Frame = -3

Query: 471 DNENKFVIDDVTLYYVYTSEPHLVTF-EQIPEEKLISIGNSLNQDQDKFPIGINLNRVSI 295
           D  N F  +  + ++V T  PH + + E +    +   G+++  + D FP G N+N + +
Sbjct: 122 DFRNNFYANGFSCHFVDTGSPHTIIYTEGLDTFNVDDAGSAIRNNTDLFPQGTNVNFIEV 181

Query: 294 RDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDL--VVF 121
               ++ V TFERG+   TLACG+G+ +   +S  LG +D   + V+V+ R GD+  + F
Sbjct: 182 TGPESLKVRTFERGVEAETLACGTGAVAAALMSYRLGKLDS--TSVSVSVRSGDVLRIDF 239

Query: 120 NEN-DKIYLSGPCSV 79
           +EN  +++LSGP  +
Sbjct: 240 SENMQEVFLSGPAHI 254


>ref|WP_079588552.1| diaminopimelate epimerase [Acetoanaerobium noterae]
 emb|SKB28193.1| diaminopimelate epimerase [Acetoanaerobium noterae]
          Length = 281

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = -3

Query: 495 DFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQ-IPEEKLISIGNSLNQDQDKFPIG 319
           +FI + I+  + KF+   V +       PHLV FE  I  ++L   G+ L Q+   FP  
Sbjct: 138 EFINEEIVIEDRKFLASAVLI-----GVPHLVIFEDDISLQELDYYGSRLEQNTKLFPKK 192

Query: 318 INLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRG 139
           IN+N V I D+STI V T+ERG    TLACG+G TS   ++  LG ++    KV V++ G
Sbjct: 193 INVNFVKIIDKSTIGVKTYERGCG-YTLACGTGMTSSAYIANKLGLVN---DKVKVSSPG 248

Query: 138 GDLVVFNENDKIYLSGP 88
           G++ +    +K+Y++GP
Sbjct: 249 GEVEIEILKEKLYMTGP 265


>ref|WP_013362075.1| diaminopimelate epimerase [[Clostridium] sticklandii]
 emb|CBH21983.1| Diaminopimelate epimerase (DAP epimerase) [ [[Clostridium]
           sticklandii]
          Length = 281

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = -3

Query: 495 DFIKKGILDNENKFVIDDVTLYYVYTSEPHLVTFEQ-IPEEKLISIGNSLNQDQDKFPIG 319
           +FI + I+  + KF+   V +       PHLV FE  I  ++L   G+ L Q+   FP  
Sbjct: 138 EFINEEIVIEDRKFLASAVLI-----GVPHLVIFEDDISLQELDYYGSRLEQNTKLFPKK 192

Query: 318 INLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRG 139
           IN+N V I D+STI V T+ERG    TLACG+G TS   ++  LG ++    KV V++ G
Sbjct: 193 INVNFVKIIDKSTIGVKTYERGCG-YTLACGTGMTSSAYIANKLGLVN---DKVKVSSPG 248

Query: 138 GDLVVFNENDKIYLSGP 88
           G++ +    +K+Y++GP
Sbjct: 249 GEVEIEILKEKLYMTGP 265


>ref|WP_048150701.1| diaminopimelate epimerase [Methanolacinia paynteri]
          Length = 286

 Score = 79.3 bits (194), Expect = 2e-14
 Identities = 46/123 (37%), Positives = 70/123 (56%)
 Frame = -3

Query: 450 IDDVTLYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQDKFPIGINLNRVSIRDESTINV 271
           I+   +Y V T  PH V F    E+  I       +  + FP G N+N V I  +  I+V
Sbjct: 158 INGYDVYAVNTGVPHAVIFVDSVEKLSIEEIAPPIRYHESFPNGANVNFVQITGKDEISV 217

Query: 270 LTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVVFNENDKIYLSG 91
            T+ERG+   TL+CG+GST+  A++  LG   +  S+V VNT GG LV++ E+D+ ++ G
Sbjct: 218 RTYERGVESETLSCGTGSTASAAVAHKLG---KTGSRVKVNTVGGPLVIYLEDDEAFMEG 274

Query: 90  PCS 82
           P +
Sbjct: 275 PAA 277


>ref|WP_067321038.1| diaminopimelate epimerase [Streptobacillus felis]
          Length = 260

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 11/152 (7%)
 Frame = -3

Query: 510 NDSAGDF-----IKKGILDNENKFV--IDDVTLY-YVYTSEPHLVTF---EQIPEEKLIS 364
           ND   DF     + K I   E K +  +D    Y Y +T   H+V +   E + EE +I 
Sbjct: 103 NDDKNDFWVSVDMNKAINTTEIKEIKALDRKFEYIYTFTGTDHVVIYIDKEDLNEEFVIK 162

Query: 363 IGNSLNQDQDKFPIGINLNRVSIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLG 184
            G ++ Q+++ FP G N+N V +++   + ++TFERG   LTLACG+G+++   +S  LG
Sbjct: 163 YGKNIEQNKEVFPKGTNVNFVYVKNMDEVEIMTFERGAG-LTLACGTGASAVGYISNKLG 221

Query: 183 HIDQAMSKVTVNTRGGDLVVFNENDKIYLSGP 88
             ++   K+     GG+L +  +ND IY++GP
Sbjct: 222 KTNE---KIKAKLLGGNLEIELKNDTIYMNGP 250


>ref|WP_068866108.1| diaminopimelate epimerase [Prosthecochloris sp. CIB 2401]
 gb|ANT64057.1| Diaminopimelate epimerase [Prosthecochloris sp. CIB 2401]
          Length = 262

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
 Frame = -3

Query: 471 DNENKFVIDDVTLYYVYTSEPH-LVTFEQIPEEKLISIGNSLNQDQDKFPIGINLNRVSI 295
           D  + F +   T Y+V T  PH L+  E +    +  +G ++  + + FP G N+N V +
Sbjct: 122 DFRDAFEVCGHTCYFVDTGSPHTLLVTEDVDSFDVDGVGRAIRNNTELFPEGTNVNIVQV 181

Query: 294 RDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVVFN- 118
              +TI + TFERG+   TLACG+G+ +   L + LG +D     VTV  R GDL+  + 
Sbjct: 182 TSPTTIKLRTFERGVEAETLACGTGAVASALLCRKLGLLDSCNIGVTV--RSGDLLQVDF 239

Query: 117 --ENDKIYLSGPCSV 79
             E   +YL+GP  +
Sbjct: 240 SQEFRDVYLAGPAKI 254


>ref|WP_059139302.1| diaminopimelate epimerase [Chlorobium limicola]
 gb|KUL22763.1| diaminopimelate epimerase [Chlorobium limicola]
          Length = 272

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
 Frame = -3

Query: 471 DNENKFVIDDVTLYYVYTSEPHLVTF---EQIPEEKLISIGNSLNQDQDKFPIGINLNRV 301
           D  N   I+  + +YV T  PH+V +    ++ +  +   G ++    D FP G N+N +
Sbjct: 125 DFRNAVAIEGFSCHYVNTGSPHVVIYIDNRKLEDLDVYGFGKAIRLRSDVFPEGTNVNFL 184

Query: 300 SIRDESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDL--V 127
            I    +I++ TFERG+   TLACG+G+ +   +S  LG +  + S V VN R GD   V
Sbjct: 185 EITAPDSISLRTFERGVEDETLACGTGAVAAALMSFRLGKV--SSSTVKVNVRSGDTLEV 242

Query: 126 VFNEN-DKIYLSGPCSV--KGLDNIEN 55
            F+E+ + + L+GP  +  +G+  ++N
Sbjct: 243 AFSEDLNSVTLTGPAKIIYRGIAEVQN 269


>ref|WP_077846395.1| diaminopimelate epimerase [Clostridium puniceum]
 gb|OOM81019.1| diaminopimelate epimerase [Clostridium puniceum]
          Length = 275

 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
 Frame = -3

Query: 465 ENKFVIDDVT--LYYVYTSEPHLVTFEQIPEEKLISIGNSLNQDQDKFPIGINLNRVSIR 292
           E++  +DD T  +  V    PH V FE+  E K+I  G  L +  D F  G N+N V I 
Sbjct: 140 EHEINVDDKTYSITTVLMGVPHTVIFEKDREYKVIEEGAKLEK-LDLFKEGSNINFVKII 198

Query: 291 DESTINVLTFERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVVFNEN 112
           DE+ I V T+ERG    TLACG+G ++ V ++K LG +D    ++ V   GG+LV+   +
Sbjct: 199 DETHIRVNTWERGAG-ATLACGTGCSAAVVVAKRLGLVDN-KKEIFVKAPGGELVIEVLS 256

Query: 111 DKIYLSGPCSVKGLDNI 61
           D +Y+ GP  V  +  I
Sbjct: 257 DDVYMKGPAEVSFVGEI 273


>ref|WP_035979066.1| diaminopimelate epimerase [Brevibacillus borstelensis]
          Length = 279

 Score = 78.2 bits (191), Expect = 4e-14
 Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
 Frame = -3

Query: 432 YYVYTSEPHLVTF----EQIPEEKLISIGNSLNQDQDKFPIGINLNRVSIRDESTINVLT 265
           ++     PH V F    E++ +E++ + G ++  D   FP G+N+N V I DE+ + + T
Sbjct: 144 HFAVVGVPHTVWFVADTEEMSDEQVSAWGKAIRYDHSIFPDGVNVNFVQIADENKLKIRT 203

Query: 264 FERGINRLTLACGSGSTSCVALSKHLGHIDQAMSKVTVNTRGGDLVV 124
           +ERG+ R TLACGSG+T+    S  LG +    S VTV TRGG+L V
Sbjct: 204 YERGVERETLACGSGATASAITSSLLGLV---ASPVTVLTRGGELRV 247