BLASTX nr result

ID: Ophiopogon26_contig00050903 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050903
         (507 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX52422.1| hypothetical protein RirG_253100 [Rhizophagus irr...   342   e-110

>gb|EXX52422.1| hypothetical protein RirG_253100 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC26444.1| nuclear pore protein ely5 [Rhizophagus irregularis DAOM 181602]
          Length = 833

 Score =  342 bits (878), Expect = e-110
 Identities = 165/169 (97%), Positives = 166/169 (98%)
 Frame = +1

Query: 1   NLKDFKERLLFIGHGHLNSRIFNKSPLARLDRIPIVRISTISLDDNKKNWNDVSIVVGNP 180
           NLKDFKERLLFIGHGHLNSRIFNKSPLARLDRIPIVRISTIS DDNKKNWNDVSIVVGNP
Sbjct: 248 NLKDFKERLLFIGHGHLNSRIFNKSPLARLDRIPIVRISTISFDDNKKNWNDVSIVVGNP 307

Query: 181 GADVTRGEIITMFVTLTEMGYNLYVALDMYYRPNNYRALDGIEVAHYKIENLKNVTVNWH 360
           GADVTRGEIITMFVTLTEMGYNLYVALDMYYRPNNYR  DGIEVAHYKIENLKNVTVNWH
Sbjct: 308 GADVTRGEIITMFVTLTEMGYNLYVALDMYYRPNNYRPHDGIEVAHYKIENLKNVTVNWH 367

Query: 361 RIDSLCRKSPNNNEIPLLDIYADQYNRGLKLVLPNEIEWYQISPLPLDS 507
           RIDSLCRKSPNNNEIPLLDIYADQYNRGLKLVLPNE+EWYQISPLPLDS
Sbjct: 368 RIDSLCRKSPNNNEIPLLDIYADQYNRGLKLVLPNEVEWYQISPLPLDS 416


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