BLASTX nr result

ID: Ophiopogon26_contig00050722 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050722
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX51032.1| Lrg1p [Rhizophagus irregularis DAOM 197198w]           126   1e-32
gb|PKK69561.1| LIM-domain-containing protein [Rhizophagus irregu...   126   8e-32
dbj|GBC37008.1| LIM domain-containing protein [Rhizophagus irreg...   126   9e-32
gb|PKC56831.1| LIM-domain-containing protein [Rhizophagus irregu...   115   7e-28

>gb|EXX51032.1| Lrg1p [Rhizophagus irregularis DAOM 197198w]
          Length = 353

 Score =  126 bits (317), Expect = 1e-32
 Identities = 74/123 (60%), Positives = 77/123 (62%)
 Frame = -1

Query: 371 VKDLASKNPKTTSLKSPTRPLXXXXXXXXXXSTDERKVGALHGPRSPPTSKRSSLTATTS 192
           VKDLASKNPKTTSLKSPTRPL          STDERKVGALHGPRSPPTSKRSSLTATTS
Sbjct: 13  VKDLASKNPKTTSLKSPTRPLSASAISSSSISTDERKVGALHGPRSPPTSKRSSLTATTS 72

Query: 191 PRAXXXXXXXXXXXXXXXXNEIRPAPIIESTVXXXXXXXXXXXXXXXXXXXNDEKKSKYK 12
           PRA                NEI+PAPIIEST+                   NDEK+S YK
Sbjct: 73  PRASVFSNNIMENNKNSSLNEIKPAPIIESTINDSISDNSSTKSTVTSNISNDEKRSNYK 132

Query: 11  SID 3
           SID
Sbjct: 133 SID 135


>gb|PKK69561.1| LIM-domain-containing protein [Rhizophagus irregularis]
          Length = 496

 Score =  126 bits (317), Expect = 8e-32
 Identities = 74/123 (60%), Positives = 77/123 (62%)
 Frame = -1

Query: 371 VKDLASKNPKTTSLKSPTRPLXXXXXXXXXXSTDERKVGALHGPRSPPTSKRSSLTATTS 192
           VKDLASKNPKTTSLKSPTRPL          STDERKVGALHGPRSPPTSKRSSLTATTS
Sbjct: 13  VKDLASKNPKTTSLKSPTRPLSASAISSSSISTDERKVGALHGPRSPPTSKRSSLTATTS 72

Query: 191 PRAXXXXXXXXXXXXXXXXNEIRPAPIIESTVXXXXXXXXXXXXXXXXXXXNDEKKSKYK 12
           PRA                NEI+PAPIIEST+                   NDEK+S YK
Sbjct: 73  PRASVFSNNIMENNKNSSLNEIKPAPIIESTINDSISDNSSTKSTVTSNISNDEKRSNYK 132

Query: 11  SID 3
           SID
Sbjct: 133 SID 135


>dbj|GBC37008.1| LIM domain-containing protein [Rhizophagus irregularis DAOM 181602]
 gb|PKY28558.1| LIM-domain-containing protein [Rhizophagus irregularis]
 gb|POG72609.1| hypothetical protein GLOIN_2v1593389 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 497

 Score =  126 bits (317), Expect = 9e-32
 Identities = 74/123 (60%), Positives = 77/123 (62%)
 Frame = -1

Query: 371 VKDLASKNPKTTSLKSPTRPLXXXXXXXXXXSTDERKVGALHGPRSPPTSKRSSLTATTS 192
           VKDLASKNPKTTSLKSPTRPL          STDERKVGALHGPRSPPTSKRSSLTATTS
Sbjct: 13  VKDLASKNPKTTSLKSPTRPLSASAISSSSISTDERKVGALHGPRSPPTSKRSSLTATTS 72

Query: 191 PRAXXXXXXXXXXXXXXXXNEIRPAPIIESTVXXXXXXXXXXXXXXXXXXXNDEKKSKYK 12
           PRA                NEI+PAPIIEST+                   NDEK+S YK
Sbjct: 73  PRASVFSNNIMENNKNSSLNEIKPAPIIESTINDSISDNSSTKSTVTSNISNDEKRSNYK 132

Query: 11  SID 3
           SID
Sbjct: 133 SID 135


>gb|PKC56831.1| LIM-domain-containing protein [Rhizophagus irregularis]
          Length = 482

 Score =  115 bits (289), Expect = 7e-28
 Identities = 64/92 (69%), Positives = 66/92 (71%)
 Frame = -1

Query: 371 VKDLASKNPKTTSLKSPTRPLXXXXXXXXXXSTDERKVGALHGPRSPPTSKRSSLTATTS 192
           VKDLASKNPKTTSLKSPTRPL          STDERKVGALHGPRSPPTSKRSSLTATTS
Sbjct: 13  VKDLASKNPKTTSLKSPTRPLSASAISSSSISTDERKVGALHGPRSPPTSKRSSLTATTS 72

Query: 191 PRAXXXXXXXXXXXXXXXXNEIRPAPIIESTV 96
           PRA                NEI+PAPIIEST+
Sbjct: 73  PRASVFSNNIMENNKNSSLNEIKPAPIIESTI 104


Top