BLASTX nr result

ID: Ophiopogon26_contig00050678 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050678
         (492 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY41274.1| hypothetical protein RhiirA4_395732, partial [Rhi...    49   1e-09

>gb|PKY41274.1| hypothetical protein RhiirA4_395732, partial [Rhizophagus
           irregularis]
          Length = 67

 Score = 48.9 bits (115), Expect(2) = 1e-09
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -3

Query: 262 PGSYNQDHATRIMQLELCIVLMINTDTVCNNPCSRVLSFY 143
           P   NQ+HATRIMQLELC VLMIN DTV     +RVL+F+
Sbjct: 4   PELRNQNHATRIMQLELCTVLMINIDTV----ITRVLAFF 39



 Score = 41.6 bits (96), Expect(2) = 1e-09
 Identities = 21/27 (77%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
 Frame = -2

Query: 164 FSRSFV-LLKNDDAVILKTYIILKTYN 87
           F RS + L+KNDDAVILKTYIILKTY+
Sbjct: 38  FFRSIINLMKNDDAVILKTYIILKTYS 64


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