BLASTX nr result

ID: Ophiopogon26_contig00050620 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050620
         (574 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC30678.1| Tis13_348970 [Rhizophagus irregularis DAOM 181602]     60   1e-12
gb|POG74871.1| hypothetical protein GLOIN_2v1572258 [Rhizophagus...    52   4e-07

>dbj|GBC30678.1| Tis13_348970 [Rhizophagus irregularis DAOM 181602]
          Length = 57

 Score = 59.7 bits (143), Expect(2) = 1e-12
 Identities = 29/35 (82%), Positives = 29/35 (82%)
 Frame = -3

Query: 314 KILLLDKFKYGKHQKNNMINYKEM*KQIYSDIGNY 210
           K LLLDKFKYG HQKNN INYK   KQIYSDIGNY
Sbjct: 26  KFLLLDKFKYGNHQKNNTINYK---KQIYSDIGNY 57



 Score = 41.2 bits (95), Expect(2) = 1e-12
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -2

Query: 384 MKTGGFFISRADCIMVVSHL 325
           MKTGGFFISRADCI +VSHL
Sbjct: 1   MKTGGFFISRADCITLVSHL 20


>gb|POG74871.1| hypothetical protein GLOIN_2v1572258 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 106

 Score = 52.0 bits (123), Expect(2) = 4e-07
 Identities = 23/27 (85%), Positives = 23/27 (85%)
 Frame = +2

Query: 209 SNFQYLNKFAFTFLCNLSYCFFDACHI 289
           SNFQYLNKFAF   CNLSYCFFD CHI
Sbjct: 83  SNFQYLNKFAF---CNLSYCFFDGCHI 106



 Score = 30.0 bits (66), Expect(2) = 4e-07
 Identities = 16/23 (69%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
 Frame = +1

Query: 58  MKGHVIYNQYPSKNIIQHF--PP 120
           MKGH+IYNQ    NIIQHF  PP
Sbjct: 57  MKGHMIYNQ----NIIQHFQLPP 75


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