BLASTX nr result

ID: Ophiopogon26_contig00050300 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050300
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC17914.1| L30e-like protein [Rhizophagus irregularis] >gi|1...    87   7e-19
gb|EXX68323.1| Nhp2p [Rhizophagus irregularis DAOM 197198w] >gi|...    87   2e-18

>gb|PKC17914.1| L30e-like protein [Rhizophagus irregularis]
 gb|PKC74078.1| L30e-like protein [Rhizophagus irregularis]
 gb|PKK80383.1| L30e-like protein [Rhizophagus irregularis]
 gb|PKY12376.1| L30e-like protein [Rhizophagus irregularis]
 gb|PKY38592.1| L30e-like protein [Rhizophagus irregularis]
 gb|POG80306.1| 50S ribosomal protein L30e-like protein [Rhizophagus irregularis
           DAOM 181602=DAOM 197198]
          Length = 168

 Score = 87.0 bits (214), Expect = 7e-19
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = -3

Query: 408 KRPTSVVMIVPDRKNEDNNLEYKESFEKCLNEVKELEQFMIH 283
           KRPTSVVMIVPDRKNEDNNLEYKES EKCLNEVKELEQFMIH
Sbjct: 127 KRPTSVVMIVPDRKNEDNNLEYKESLEKCLNEVKELEQFMIH 168


>gb|EXX68323.1| Nhp2p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC26118.1| H/ACA ribonucleoprotein complex subunit 2 [Rhizophagus irregularis
           DAOM 181602]
          Length = 206

 Score = 87.0 bits (214), Expect = 2e-18
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = -3

Query: 408 KRPTSVVMIVPDRKNEDNNLEYKESFEKCLNEVKELEQFMIH 283
           KRPTSVVMIVPDRKNEDNNLEYKES EKCLNEVKELEQFMIH
Sbjct: 165 KRPTSVVMIVPDRKNEDNNLEYKESLEKCLNEVKELEQFMIH 206


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