BLASTX nr result

ID: Ophiopogon26_contig00050156 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050156
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY57007.1| hypothetical protein RhiirA4_477736 [Rhizophagus ...    41   1e-06

>gb|PKY57007.1| hypothetical protein RhiirA4_477736 [Rhizophagus irregularis]
          Length = 56

 Score = 41.2 bits (95), Expect(2) = 1e-06
 Identities = 16/18 (88%), Positives = 18/18 (100%)
 Frame = -1

Query: 280 VSVQNNTYWTSSSYLSWI 227
           +S+QNNTYWTSSSYLSWI
Sbjct: 1   MSIQNNTYWTSSSYLSWI 18



 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 20/30 (66%), Positives = 22/30 (73%)
 Frame = -2

Query: 120 SCYKYFSA*IFYPKETIGDIYSSSTSNELA 31
           S   + +A I YPKETIGDIYSSSTSN  A
Sbjct: 13  SYLSWIAAYISYPKETIGDIYSSSTSNGAA 42


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