BLASTX nr result

ID: Ophiopogon26_contig00050116 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00050116
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC49273.1| hypothetical protein RIR_3119100 [Rhizophagus ir...   168   1e-51

>dbj|GBC49273.1| hypothetical protein RIR_3119100 [Rhizophagus irregularis DAOM
           181602]
 gb|PKB94685.1| hypothetical protein RhiirA5_368165 [Rhizophagus irregularis]
 gb|PKC53236.1| hypothetical protein RhiirA1_430132 [Rhizophagus irregularis]
 gb|PKK66243.1| hypothetical protein RhiirC2_753757 [Rhizophagus irregularis]
 gb|PKY29627.1| hypothetical protein RhiirB3_418145 [Rhizophagus irregularis]
 gb|POG75545.1| hypothetical protein GLOIN_2v1872703 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 104

 Score =  168 bits (426), Expect = 1e-51
 Identities = 87/104 (83%), Positives = 89/104 (85%), Gaps = 4/104 (3%)
 Frame = +2

Query: 104 MPSASNNNIPTGSPKTMREFEVLVVXXXXXXXXXGQYHQPQP---MLRTKRINCNQTNGT 274
           MPSASNNNIPT  PKTMRE+EVLV+         GQYHQPQP   MLRTKRINCNQTNGT
Sbjct: 1   MPSASNNNIPTSLPKTMREYEVLVIPSSPTSPT-GQYHQPQPQQPMLRTKRINCNQTNGT 59

Query: 275 IFWIPDGYRPVLVRTSDLPLLVGAEYNLPSPSNS-GYTSSDDSN 403
           IFWIPDGYRPVLVRTSDLPLLVGAEYNLPSPSNS GYTSSDDSN
Sbjct: 60  IFWIPDGYRPVLVRTSDLPLLVGAEYNLPSPSNSTGYTSSDDSN 103


Top