BLASTX nr result

ID: Ophiopogon26_contig00049568 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00049568
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX53908.1| Pex7p [Rhizophagus irregularis DAOM 197198w]           125   2e-31
gb|POG69041.1| hypothetical protein GLOIN_2v1777634 [Rhizophagus...   125   4e-31
dbj|GBC53145.1| Histone-binding protein RBBP4 [Rhizophagus irreg...   125   6e-31
gb|PKY51019.1| WD40 repeat-like protein [Rhizophagus irregularis]     100   2e-22
gb|PKC06620.1| WD40 repeat-like protein [Rhizophagus irregularis...    81   9e-17

>gb|EXX53908.1| Pex7p [Rhizophagus irregularis DAOM 197198w]
          Length = 370

 Score =  125 bits (313), Expect = 2e-31
 Identities = 60/67 (89%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   INKNKNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF-ADCGVAGLLQVWRPS 177
           INKN NDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF +  GV+GLLQVWRP+
Sbjct: 300 INKNNNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPFVSHHGVSGLLQVWRPN 359

Query: 178 INIDLMN 198
           INIDLMN
Sbjct: 360 INIDLMN 366


>gb|POG69041.1| hypothetical protein GLOIN_2v1777634 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 429

 Score =  125 bits (313), Expect = 4e-31
 Identities = 60/67 (89%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   INKNKNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF-ADCGVAGLLQVWRPS 177
           INKN NDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF +  GV+GLLQVWRP+
Sbjct: 359 INKNNNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPFVSHHGVSGLLQVWRPN 418

Query: 178 INIDLMN 198
           INIDLMN
Sbjct: 419 INIDLMN 425


>dbj|GBC53145.1| Histone-binding protein RBBP4 [Rhizophagus irregularis DAOM 181602]
          Length = 455

 Score =  125 bits (313), Expect = 6e-31
 Identities = 60/67 (89%), Positives = 63/67 (94%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   INKNKNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF-ADCGVAGLLQVWRPS 177
           INKN NDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF +  GV+GLLQVWRP+
Sbjct: 369 INKNNNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPFVSHHGVSGLLQVWRPN 428

Query: 178 INIDLMN 198
           INIDLMN
Sbjct: 429 INIDLMN 435


>gb|PKY51019.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 365

 Score =  100 bits (250), Expect = 2e-22
 Identities = 49/55 (89%), Positives = 51/55 (92%), Gaps = 1/55 (1%)
 Frame = +1

Query: 1   INKNKNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF-ADCGVAGLLQ 162
           INKN NDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPF +  GV+GLLQ
Sbjct: 293 INKNNNDKQEGAKFKHTGHRQKVLDIAWHPDPEFSKTIASVSPFVSHHGVSGLLQ 347


>gb|PKC06620.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKC62246.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKK63962.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY12649.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY26425.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 134

 Score = 81.3 bits (199), Expect = 9e-17
 Identities = 40/48 (83%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
 Frame = +1

Query: 58  RQKVLDIAWHPDPEFSKTIASVSPF-ADCGVAGLLQVWRPSINIDLMN 198
           R  VLDIAWHPDPEFSKTIASVSPF +  GV+GLLQVWRP+INIDLMN
Sbjct: 83  RVTVLDIAWHPDPEFSKTIASVSPFVSHHGVSGLLQVWRPNINIDLMN 130


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