BLASTX nr result

ID: Ophiopogon26_contig00049450 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00049450
         (547 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC29756.1| mitochondrial carrier protein [Rhizophagus irreg...    75   2e-13
dbj|GBC29757.1| mitochondrial carrier protein [Rhizophagus irreg...    66   6e-10
gb|EXX51723.1| Ort1p [Rhizophagus irregularis DAOM 197198w]            64   3e-09
gb|PKY61436.1| hypothetical protein RhiirA4_486413 [Rhizophagus ...    58   1e-06

>dbj|GBC29756.1| mitochondrial carrier protein [Rhizophagus irregularis DAOM 181602]
          Length = 188

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 44/69 (63%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
 Frame = +3

Query: 132 ARESCLLFRWPKNALKFDGFLDLFGCAVSLSGFRRIFQVGR*RSI-------LWSIWTRG 290
           ARE  LLFRWPKNALKFDGFLDL      LSGFRRIFQ G  +S           + TRG
Sbjct: 18  AREFWLLFRWPKNALKFDGFLDL------LSGFRRIFQAGHSQSFGIFGRLPPTGLRTRG 71

Query: 291 KLDFGAFDA 317
           KLDFGAFDA
Sbjct: 72  KLDFGAFDA 80


>dbj|GBC29757.1| mitochondrial carrier protein [Rhizophagus irregularis DAOM 181602]
          Length = 202

 Score = 65.9 bits (159), Expect = 6e-10
 Identities = 48/107 (44%), Positives = 57/107 (53%), Gaps = 16/107 (14%)
 Frame = +1

Query: 112 RISCGNTLGNLVYFLDGQRTR*NLMVSW----ISLDA-RSLYRDFGGSFRSDVNGQSF-- 270
           RISCGN L +   F         L+  W    +  D    L   F   F++ +N   +  
Sbjct: 3   RISCGNGLSS---FRPSDAREFWLLFRWPKNALKFDGFLDLLSGFRRIFQAGLNPLEYLD 59

Query: 271 ----GVFGRVENSTSEHLTREVRGNDLSS-----SPERRFGFRSFID 384
                VFGRVENSTSEHLTR+VRGNDLSS     S ERRFGFRS +D
Sbjct: 60  VYRLPVFGRVENSTSEHLTRKVRGNDLSSRYCTLSSERRFGFRSLVD 106


>gb|EXX51723.1| Ort1p [Rhizophagus irregularis DAOM 197198w]
          Length = 217

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
 Frame = +1

Query: 187 VSWISLDARSLYRDFGGSFRS---DVNGQSFGVFGRVENSTSEHLTREVRGNDLSS---- 345
           + W S     +  D  G  +S   ++      VFGRVENSTSEHLTR+VRGNDLSS    
Sbjct: 8   IRWFSGSLIGIPADLSGRTQSILWNIWTYRLPVFGRVENSTSEHLTRKVRGNDLSSRYCT 67

Query: 346 -SPERRFGFRSFID 384
            S ERRFGFRS +D
Sbjct: 68  LSSERRFGFRSLVD 81


>gb|PKY61436.1| hypothetical protein RhiirA4_486413 [Rhizophagus irregularis]
          Length = 341

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 51/121 (42%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
 Frame = +3

Query: 96  YVLVSADLLWK-------YARESCLLFRWPKNALKFDGFLDLFGCAVSLSGFRRIFQVGR 254
           Y+ VSA LLWK       YA E   LFR P+ ALK DGFLD FG A S  GF      G 
Sbjct: 92  YIFVSAGLLWKCNSFRPSYAWEFGFLFRRPRTALKLDGFLDFFGRA-SFFGFLAQDFGGS 150

Query: 255 *RS--ILWSIW-----------------TRGKLDFGAFDA*GTGK*FEFESGTPIWVSVF 377
             S   L  IW                 TRGKLDFG F+A G G      + T I VS++
Sbjct: 151 FGSDTALRGIWTRGISVRGVLLVGSGPQTRGKLDFGTFNAWGMG------NETFINVSIY 204

Query: 378 Y 380
           Y
Sbjct: 205 Y 205


Top