BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00049433
         (580 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK72660.1| hypothetical protein RhiirC2_742259 [Rhizophagus ...   382   e-128
gb|EXX64899.1| hypothetical protein RirG_138460 [Rhizophagus irr...   381   e-127
gb|PKY43734.1| hypothetical protein RhiirA4_457800 [Rhizophagus ...   382   e-126
gb|PKC04855.1| hypothetical protein RhiirA5_421674 [Rhizophagus ...   381   e-126
gb|POG60756.1| hypothetical protein GLOIN_2v1710457, partial [Rh...   284   6e-96
dbj|GBC19135.1| pentatricopeptide repeat superfamily protein, pu...   259   1e-80
gb|PKY23817.1| hypothetical protein RhiirB3_412313 [Rhizophagus ...   231   4e-74
pdb|5I9D|A Chain A, Crystal Structure Of Designed Pentatricopept...   107   1e-23
pdb|5I9H|A Chain A, Crystal Structure Of Designed Pentatricopept...   103   2e-22
pdb|5I9G|C Chain C, Crystal Structure Of Designed Pentatricopept...   102   5e-22
pdb|5I9F|A Chain A, Crystal Structure Of Designed Pentatricopept...   102   5e-22
ref|XP_010103287.2| putative pentatricopeptide repeat-containing...   102   1e-21
ref|XP_010106220.1| putative pentatricopeptide repeat-containing...   102   1e-21
gb|EXC46504.1| hypothetical protein L484_000619 [Morus notabilis]     102   1e-21
gb|KCW88273.1| hypothetical protein EUGRSUZ_A00652 [Eucalyptus g...   101   1e-21
ref|XP_010040584.1| PREDICTED: pentatricopeptide repeat-containi...   101   2e-21
ref|XP_020202863.1| putative pentatricopeptide repeat-containing...   100   3e-21
ref|XP_007016495.1| PREDICTED: putative pentatricopeptide repeat...   100   3e-21
ref|XP_020241481.1| protein Rf1, mitochondrial-like isoform X1 [...   100   4e-21
ref|XP_021277825.1| putative pentatricopeptide repeat-containing...   100   4e-21

>gb|PKK72660.1| hypothetical protein RhiirC2_742259 [Rhizophagus irregularis]
          Length = 623

 Score =  382 bits (982), Expect = e-128
 Identities = 193/193 (100%), Positives = 193/193 (100%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC
Sbjct: 331 EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 390

Query: 181 KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI
Sbjct: 391 KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 450

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV
Sbjct: 451 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 510

Query: 541 RDNVSLNHIPFTA 579
           RDNVSLNHIPFTA
Sbjct: 511 RDNVSLNHIPFTA 523


>gb|EXX64899.1| hypothetical protein RirG_138460 [Rhizophagus irregularis DAOM
           197198w]
          Length = 671

 Score =  381 bits (979), Expect = e-127
 Identities = 192/193 (99%), Positives = 193/193 (100%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC
Sbjct: 379 EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 438

Query: 181 KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNL+I
Sbjct: 439 KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLYI 498

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV
Sbjct: 499 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 558

Query: 541 RDNVSLNHIPFTA 579
           RDNVSLNHIPFTA
Sbjct: 559 RDNVSLNHIPFTA 571


>gb|PKY43734.1| hypothetical protein RhiirA4_457800 [Rhizophagus irregularis]
          Length = 747

 Score =  382 bits (982), Expect = e-126
 Identities = 193/193 (100%), Positives = 193/193 (100%)
 Frame = +1

Query: 1    EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
            EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC
Sbjct: 455  EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 514

Query: 181  KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
            KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI
Sbjct: 515  KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 574

Query: 361  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
            YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV
Sbjct: 575  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 634

Query: 541  RDNVSLNHIPFTA 579
            RDNVSLNHIPFTA
Sbjct: 635  RDNVSLNHIPFTA 647


>gb|PKC04855.1| hypothetical protein RhiirA5_421674 [Rhizophagus irregularis]
 gb|PKC67169.1| hypothetical protein RhiirA1_458756 [Rhizophagus irregularis]
          Length = 747

 Score =  381 bits (979), Expect = e-126
 Identities = 192/193 (99%), Positives = 193/193 (100%)
 Frame = +1

Query: 1    EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
            EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC
Sbjct: 455  EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 514

Query: 181  KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
            KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNL+I
Sbjct: 515  KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLYI 574

Query: 361  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
            YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV
Sbjct: 575  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 634

Query: 541  RDNVSLNHIPFTA 579
            RDNVSLNHIPFTA
Sbjct: 635  RDNVSLNHIPFTA 647


>gb|POG60756.1| hypothetical protein GLOIN_2v1710457, partial [Rhizophagus
           irregularis DAOM 181602=DAOM 197198]
          Length = 143

 Score =  284 bits (726), Expect = 6e-96
 Identities = 142/143 (99%), Positives = 143/143 (100%)
 Frame = +1

Query: 7   MNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKR 186
           MNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKR
Sbjct: 1   MNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKR 60

Query: 187 NNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
           NNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNL+IYT
Sbjct: 61  NNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLYIYT 120

Query: 367 TIISLATVSSRHSLAVKIFKELL 435
           TIISLATVSSRHSLAVKIFKELL
Sbjct: 121 TIISLATVSSRHSLAVKIFKELL 143


>dbj|GBC19135.1| pentatricopeptide repeat superfamily protein, putative isoform 1
           [Rhizophagus irregularis DAOM 181602]
          Length = 589

 Score =  259 bits (663), Expect = 1e-80
 Identities = 128/130 (98%), Positives = 130/130 (100%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC
Sbjct: 455 EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 514

Query: 181 KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNL+I
Sbjct: 515 KRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLYI 574

Query: 361 YTTIISLATV 390
           YTTIISLAT+
Sbjct: 575 YTTIISLATL 584



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
 Frame = +1

Query: 25  MPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKA 204
           +P+   +  LI  +S+    D  KIE I+ ++L   ++P+   Y  LI A  +  N   A
Sbjct: 358 IPDIILFTSLISGYSKKGEID--KIEKIFRKLLELGIKPDRKLYTTLIFAYLRCRNTHSA 415

Query: 205 SRFLNEMKRKFPITNVALNPI-IRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISL 381
            +   ++  K    ++ L    I  Q ++ +  NA +++ +M + G+ PN   Y  +I  
Sbjct: 416 HKIYEQIAEKNLKHDIYLFVSRIYMQAINSNSANAGKIFEKMNASGIMPNTETYNHLIYA 475

Query: 382 ATV--SSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVR---- 543
            +   S+  S    I+ ++LA+  +PN Y Y   I ++ K     KA +   +M R    
Sbjct: 476 HSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASRFLNEMKRKFPI 535

Query: 544 DNVSLNHI 567
            NV+LN I
Sbjct: 536 TNVALNPI 543


>gb|PKY23817.1| hypothetical protein RhiirB3_412313 [Rhizophagus irregularis]
          Length = 219

 Score =  231 bits (590), Expect = 4e-74
 Identities = 118/119 (99%), Positives = 119/119 (100%)
 Frame = +1

Query: 223 MKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLATVSSRH 402
           MKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNL+IYTTIISLATVSSRH
Sbjct: 1   MKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLYIYTTIISLATVSSRH 60

Query: 403 SLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPFTA 579
           SLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPFTA
Sbjct: 61  SLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPFTA 119


>pdb|5I9D|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score =  107 bits (266), Expect = 1e-23
 Identities = 60/192 (31%), Positives = 104/192 (54%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 75  EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 192

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y+T+I     + +   A+K+F+E++ KG KPNV  YS  I  L KA K  +A+K+F++M
Sbjct: 193 TYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEM 252

Query: 538 VRDNVSLNHIPF 573
           V   +  N + +
Sbjct: 253 VEKGIKPNVVTY 264



 Score =  104 bits (259), Expect = 1e-22
 Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI PN  TY+ LI    +    D +    ++ +M+ + ++PN  TY  LID +C
Sbjct: 215 EEMVEKGIKPNVVTYSTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPNVVTYNTLIDGLC 272

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 332

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 392

Query: 538 VRDNVSLNHIPF 573
           V   +  + + +
Sbjct: 393 VEKGIKPDELTY 404



 Score =  103 bits (258), Expect = 1e-22
 Identities = 58/185 (31%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 167

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  + +I     +G ++ AL+L+ +M+  G++PN+ 
Sbjct: 168 KAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVV 227

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y+T+I     + +   A+K+F+E++ KG KPNV  Y+  I  L KA K  +A+K+F++M
Sbjct: 228 TYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEM 287

Query: 538 VRDNV 552
           V   +
Sbjct: 288 VEKGI 292



 Score =  102 bits (254), Expect = 5e-22
 Identities = 56/192 (29%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           ++   G+ P   TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +CK
Sbjct: 41  ELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLCK 98

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
                +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  
Sbjct: 99  AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 158

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y T+I     + +   A+K+F+E++ KG KP+V  YS  I  L KA K  +A+K+F++MV
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMV 218

Query: 541 RDNVSLNHIPFT 576
              +  N + ++
Sbjct: 219 EKGIKPNVVTYS 230



 Score = 91.3 bits (225), Expect = 5e-18
 Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
 Frame = +1

Query: 31  NTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASR 210
           +   Y  +++A SR    + +    ++ ++  Q V P   TY  LID +CK     +A +
Sbjct: 15  DVRAYTTVLHALSRAGRYERAL--ELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALK 72

Query: 211 FLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLAT 387
              EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  Y T+I    
Sbjct: 73  LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 388 VSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHI 567
            + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV   +  + +
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 192

Query: 568 PFT 576
            ++
Sbjct: 193 TYS 195



 Score = 88.2 bits (217), Expect = 6e-17
 Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI PN  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 250 EEMVEKGIKPNVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 307

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 367

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            Y T+I     + +   A+K+F+E++ KG KP+   Y   + S  +AK+ ++A
Sbjct: 368 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEA 420


>pdb|5I9H|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
          Length = 460

 Score =  103 bits (257), Expect = 2e-22
 Identities = 58/185 (31%), Positives = 101/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 75  EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 192

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            YTT+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 193 TYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEM 252

Query: 538 VRDNV 552
           V   +
Sbjct: 253 VEKGI 257



 Score =  101 bits (251), Expect = 1e-21
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 167

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V    +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 168 KAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 227

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            YTT+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 228 TYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 287

Query: 538 VRDNV 552
           V   +
Sbjct: 288 VEKGI 292



 Score =  100 bits (250), Expect = 2e-21
 Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           ++   G+ P   TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +CK
Sbjct: 41  ELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLCK 98

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
                +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  
Sbjct: 99  AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 158

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMV 218

Query: 541 RDNVSLNHIPFT 576
              +  + + +T
Sbjct: 219 EKGIKPDVVTYT 230



 Score =  100 bits (248), Expect = 4e-21
 Identities = 56/192 (29%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TY  LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 215 EEMVEKGIKPDVVTYTTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 272

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 332

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 392

Query: 538 VRDNVSLNHIPF 573
           V   +  + + +
Sbjct: 393 VEKGIKPDELTY 404



 Score = 92.8 bits (229), Expect = 1e-18
 Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 1/183 (0%)
 Frame = +1

Query: 31  NTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASR 210
           +   Y  +++A SR    + +    ++ ++  Q V P   TY  LID +CK     +A +
Sbjct: 15  DVRAYTTVLHALSRAGRYERAL--ELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALK 72

Query: 211 FLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLAT 387
              EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  Y T+I    
Sbjct: 73  LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 388 VSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHI 567
            + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV   +  + +
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 192

Query: 568 PFT 576
            +T
Sbjct: 193 TYT 195



 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 250 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 307

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 367

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            Y T+I     + +   A+K+F+E++ KG KP+   Y   + S  +AK+ ++A
Sbjct: 368 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEA 420


>pdb|5I9G|C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score =  102 bits (254), Expect = 5e-22
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 215 EEMVEKGIKPSVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPSVVTYNTLIDGLC 272

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 332

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 392

Query: 538 VRDNVSLNHIPF 573
           V   +  + + +
Sbjct: 393 VEKGIKPDELTY 404



 Score =  101 bits (252), Expect = 1e-21
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 75  EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 192

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 193 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEM 252

Query: 538 VRDNV 552
           V   +
Sbjct: 253 VEKGI 257



 Score =  101 bits (252), Expect = 1e-21
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 167

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 168 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVV 227

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 228 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEM 287

Query: 538 VRDNV 552
           V   +
Sbjct: 288 VEKGI 292



 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           ++   G+ P   TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +CK
Sbjct: 41  ELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLCK 98

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
                +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  
Sbjct: 99  AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 158

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 218

Query: 541 RDNV 552
              +
Sbjct: 219 EKGI 222



 Score = 90.9 bits (224), Expect = 7e-18
 Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
 Frame = +1

Query: 31  NTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASR 210
           +   Y  +++A SR    + +    ++ ++  Q V P   TY  LID +CK     +A +
Sbjct: 15  DVRAYTTVLHALSRAGRYERAL--ELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALK 72

Query: 211 FLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLAT 387
              EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  Y T+I    
Sbjct: 73  LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 388 VSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNV 552
            + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV   +
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 187



 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 250 EEMVEKGIKPSVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 307

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 367

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            Y T+I     + +   A+K+F+E++ KG KP+   Y   + S  +AK+ ++A
Sbjct: 368 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEA 420


>pdb|5I9F|A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U10 In Complex With Its Target Rna U10
          Length = 460

 Score =  102 bits (254), Expect = 5e-22
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 215 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 272

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 273 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 332

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 333 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 392

Query: 538 VRDNVSLNHIPF 573
           V   +  + + +
Sbjct: 393 VEKGIKPDELTY 404



 Score =  101 bits (252), Expect = 1e-21
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 75  EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 192

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 193 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 252

Query: 538 VRDNV 552
           V   +
Sbjct: 253 VEKGI 257



 Score =  101 bits (252), Expect = 1e-21
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 110 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 167

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 168 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 227

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++M
Sbjct: 228 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEM 287

Query: 538 VRDNV 552
           V   +
Sbjct: 288 VEKGI 292



 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           ++   G+ P   TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +CK
Sbjct: 41  ELRRQGVAPTVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLCK 98

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
                +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  
Sbjct: 99  AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 158

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y T+I     + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV
Sbjct: 159 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 218

Query: 541 RDNV 552
              +
Sbjct: 219 EKGI 222



 Score = 90.9 bits (224), Expect = 7e-18
 Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
 Frame = +1

Query: 31  NTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASR 210
           +   Y  +++A SR    + +    ++ ++  Q V P   TY  LID +CK     +A +
Sbjct: 15  DVRAYTTVLHALSRAGRYERAL--ELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALK 72

Query: 211 FLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLAT 387
              EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++  Y T+I    
Sbjct: 73  LFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLC 132

Query: 388 VSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNV 552
            + +   A+K+F+E++ KG KP+V  Y+  I  L KA K  +A+K+F++MV   +
Sbjct: 133 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGI 187



 Score = 86.3 bits (212), Expect = 3e-16
 Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   GI P+  TYN LI    +    D +    ++ +M+ + ++P+  TY  LID +C
Sbjct: 250 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEAL--KLFEEMVEKGIKPDVVTYNTLIDGLC 307

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K     +A +   EM  K      V  N +I     +G ++ AL+L+ +M+  G++P++ 
Sbjct: 308 KAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVV 367

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            Y T+I     + +   A+K+F+E++ KG KP+   Y   + S  +AK+ ++A
Sbjct: 368 TYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEA 420


>ref|XP_010103287.2| putative pentatricopeptide repeat-containing protein At5g59900
           [Morus notabilis]
          Length = 910

 Score =  102 bits (254), Expect = 1e-21
 Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           K++  G++PN   YN LI +  +D   D  K E+++  M  + + PN  TY +LID+ C+
Sbjct: 355 KVSGVGVVPNLFVYNSLINSLCKDGKID--KAESLFSNMDKKGLFPNDITYSILIDSFCR 412

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           R     A R+L++M       T    N +I  +   G +  A   + +MIS G+ P +  
Sbjct: 413 RGELDVAVRYLDKMSDTGIRATVYPYNSLINGECKFGSLTAAETFFTEMISRGLVPTVAT 472

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YT++I     +     A++++ E++ KG  PNVY ++A I+ L +A +  +A  +F +MV
Sbjct: 473 YTSLIDGYCKAGEIHKAIRLYHEMIGKGIAPNVYTFTALISGLCRANRMPEANDLFDEMV 532

Query: 541 RDNVSLNHIPF 573
           + N+  N + +
Sbjct: 533 KRNIMPNEVTY 543



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1    EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
            ++M    IMPN  TYN +I  +  +   +T++   +  +M+   + P+ YTY  LI  +C
Sbjct: 529  DEMVKRNIMPNEVTYNVMIEEYCCEG--NTTRAFELLDEMVENGLTPDTYTYRPLISGLC 586

Query: 181  KRNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
                  +A  F++++ K    +  +  + ++      G + +AL   ++MI  GV+ +L 
Sbjct: 587  STGRVSEAKEFVDDLHKENRDLNEMCYSALLHGYCKEGRLKDALSACHEMIERGVDMDLV 646

Query: 358  IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
             Y  +I+             + K +  +  +P+  +Y++ I +  K+ K ++A  ++  M
Sbjct: 647  CYAILINGTLKQQDTRKLFSLLKAMCDQQLRPDNIIYTSMIDAYGKSGKLKEAFGVWDIM 706

Query: 538  VRDNVSLNHIPFTA 579
            V +    N + +TA
Sbjct: 707  VGEGCIPNVVTYTA 720



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 47/191 (24%), Positives = 78/191 (40%)
 Frame = +1

Query: 7    MNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKR 186
            M   G +PN  TY  LI  H    +  T++ E +  QML     PN  TY   ++ +   
Sbjct: 706  MVGEGCIPNVVTYTALI--HGLCKAGYTTQAERLCEQMLISDSPPNRITYGCFLNHLIND 763

Query: 187  NNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
             N  KA++    M        V  N +I      G    A  L   M++ G+ P+   Y+
Sbjct: 764  GNMEKATQLHKAMLEGLLANTVTYNMLIHGFCKMGKFEEASELLVGMMNNGIFPDCITYS 823

Query: 367  TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
            T+I           A +++  +L KG KP+   Y+  I       +  KA ++   M+R 
Sbjct: 824  TLIYEYCKRGNLQEATRLWDTMLDKGLKPDALAYNFLIHGCCVTGELNKAFELRDDMMRR 883

Query: 547  NVSLNHIPFTA 579
             +  N   +++
Sbjct: 884  GLMPNQFTYSS 894



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1    EKMNASGIMPNTETY----NHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLI 168
            E+M  S   PN  TY    NHLI      N  +  K   ++  ML + +  N  TY +LI
Sbjct: 739  EQMLISDSPPNRITYGCFLNHLI------NDGNMEKATQLHKAML-EGLLANTVTYNMLI 791

Query: 169  DAMCKRNNFLKASRFLNEMKRK--FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGV 342
               CK   F +AS  L  M     FP   +  + +I      G++  A RL++ M+  G+
Sbjct: 792  HGFCKMGKFEEASELLVGMMNNGIFPDC-ITYSTLIYEYCKRGNLQEATRLWDTMLDKGL 850

Query: 343  EPNLFIYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            +P+   Y  +I    V+   + A ++  +++ +G  PN + YS+ +     A   Q A
Sbjct: 851  KPDALAYNFLIHGCCVTGELNKAFELRDDMMRRGLMPNQFTYSSLMQGTCLASTVQPA 908



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  ASGIMPNTETYNHLIYAHSRDNST-DTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRN 189
           ++G   +  TYN LI+   + +   +   ++N+  Q   + ++ +  TY  L+   C+  
Sbjct: 253 SNGCALSVVTYNVLIHGLCKSHRAWEAVGVKNLLGQ---KGLKADVVTYCTLVLGFCRVQ 309

Query: 190 NFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
            F      ++EM    F  +  AL+ ++      G I +A  L N++  VGV PNLF+Y 
Sbjct: 310 EFEIGVDLMDEMMELGFVPSEAALSGLVDGLRKKGKIEDAFDLVNKVSGVGVVPNLFVYN 369

Query: 367 TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
           ++I+      +   A  +F  +  KG  PN   YS  I S  +  +   A++   +M   
Sbjct: 370 SLINSLCKDGKIDKAESLFSNMDKKGLFPNDITYSILIDSFCRRGELDVAVRYLDKMSDT 429

Query: 547 NVSLNHIPFTA 579
            +     P+ +
Sbjct: 430 GIRATVYPYNS 440


>ref|XP_010106220.1| putative pentatricopeptide repeat-containing protein At5g59900
           [Morus notabilis]
 gb|EXC51944.1| hypothetical protein L484_000629 [Morus notabilis]
          Length = 910

 Score =  102 bits (254), Expect = 1e-21
 Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           K++  G++PN   YN LI +  +D   D  K E+++  M  + + PN  TY +LID+ C+
Sbjct: 355 KVSGVGVVPNLFVYNSLINSLCKDGKID--KAESLFSNMDKKGLFPNDITYSILIDSFCR 412

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           R     A R+L++M       T    N +I  +   G +  A   + +MIS G+ P +  
Sbjct: 413 RGELDVAVRYLDKMSDTGIRATVYPYNSLINGECKFGSLTAAETFFTEMISRGLVPTVAT 472

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YT++I     +     A++++ E++ KG  PNVY ++A I+ L +A +  +A  +F +MV
Sbjct: 473 YTSLIDGYCKAGEIHKAIRLYHEMIGKGIAPNVYTFTALISGLCRANRMPEANDLFDEMV 532

Query: 541 RDNVSLNHIPF 573
           + N+  N + +
Sbjct: 533 KRNIMPNEVTY 543



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/194 (22%), Positives = 90/194 (46%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1    EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
            ++M    IMPN  TYN +I  +  +   +T++   +  +M+   + P+ YTY  LI  +C
Sbjct: 529  DEMVKRNIMPNEVTYNVMIEEYCCEG--NTTRAFELLDEMVENGLTPDTYTYRPLISGLC 586

Query: 181  KRNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
                  +A  F++++ K    +  +  + ++      G + +AL    +MI  GV  +L 
Sbjct: 587  STGRVSEAKEFVDDLHKENRDLNEMCYSALLHGYCKEGRLKDALSACREMIERGVNMDLV 646

Query: 358  IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
             Y  +I+             + K +  +  +P+  +Y++ I +  K+ K ++A  ++  M
Sbjct: 647  CYAILINGTLKQQDTRKLFSLLKAMCDQQLRPDNIIYTSMIDAYGKSGKLKEAFGVWDIM 706

Query: 538  VRDNVSLNHIPFTA 579
            V +    N + +TA
Sbjct: 707  VGEGCIPNVVTYTA 720



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 47/191 (24%), Positives = 78/191 (40%)
 Frame = +1

Query: 7    MNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKR 186
            M   G +PN  TY  LI  H    +  T++ E +  QML     PN  TY   ++ +   
Sbjct: 706  MVGEGCIPNVVTYTALI--HGLCKAGYTTQAERLCEQMLISDSPPNRITYGCFLNHLIND 763

Query: 187  NNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
             N  KA++    M        V  N +I      G    A  L   M++ G+ P+   Y+
Sbjct: 764  GNMEKATQLHKAMLEGLLANTVTYNMLIHGFCKMGKFEEASELLVGMMNNGIFPDCITYS 823

Query: 367  TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
            T+I           A +++  +L KG KP+   Y+  I       +  KA ++   M+R 
Sbjct: 824  TLIYEYCKRGNLQEATRLWDTMLDKGLKPDALAYNFLIHGCCVTGELTKAFELRDDMMRR 883

Query: 547  NVSLNHIPFTA 579
             +  N   +++
Sbjct: 884  GLMPNQFTYSS 894



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1    EKMNASGIMPNTETY----NHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLI 168
            E+M  S   PN  TY    NHLI      N  +  K   ++  ML + +  N  TY +LI
Sbjct: 739  EQMLISDSPPNRITYGCFLNHLI------NDGNMEKATQLHKAML-EGLLANTVTYNMLI 791

Query: 169  DAMCKRNNFLKASRFLNEMKRK--FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGV 342
               CK   F +AS  L  M     FP   +  + +I      G++  A RL++ M+  G+
Sbjct: 792  HGFCKMGKFEEASELLVGMMNNGIFPDC-ITYSTLIYEYCKRGNLQEATRLWDTMLDKGL 850

Query: 343  EPNLFIYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            +P+   Y  +I    V+   + A ++  +++ +G  PN + YS+ +     A   Q A
Sbjct: 851  KPDALAYNFLIHGCCVTGELTKAFELRDDMMRRGLMPNQFTYSSLMQGTCLASTVQPA 908



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  ASGIMPNTETYNHLIYAHSRDNST-DTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRN 189
           ++G   +  TYN LI+   + +   +   ++N+  Q   + ++ +  TY  L+   C+  
Sbjct: 253 SNGCALSVVTYNVLIHGLCKSHRAWEAVGVKNLLGQ---KGLKADVVTYCTLVLGFCRVQ 309

Query: 190 NFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
            F      ++EM    F  +  AL+ ++      G I +A  L N++  VGV PNLF+Y 
Sbjct: 310 EFEIGVDLMDEMMELGFVPSEAALSGLVDGLRKKGKIEDAFDLVNKVSGVGVVPNLFVYN 369

Query: 367 TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
           ++I+      +   A  +F  +  KG  PN   YS  I S  +  +   A++   +M   
Sbjct: 370 SLINSLCKDGKIDKAESLFSNMDKKGLFPNDITYSILIDSFCRRGELDVAVRYLDKMSDT 429

Query: 547 NVSLNHIPFTA 579
            +     P+ +
Sbjct: 430 GIRATVYPYNS 440


>gb|EXC46504.1| hypothetical protein L484_000619 [Morus notabilis]
          Length = 955

 Score =  102 bits (254), Expect = 1e-21
 Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           K++  G++PN   YN LI +  +D   D  K E+++  M  + + PN  TY +LID+ C+
Sbjct: 400 KVSGVGVVPNLFVYNSLINSLCKDGKID--KAESLFSNMDKKGLFPNDITYSILIDSFCR 457

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           R     A R+L++M       T    N +I  +   G +  A   + +MIS G+ P +  
Sbjct: 458 RGELDVAVRYLDKMSDTGIRATVYPYNSLINGECKFGSLTAAETFFTEMISRGLVPTVAT 517

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YT++I     +     A++++ E++ KG  PNVY ++A I+ L +A +  +A  +F +MV
Sbjct: 518 YTSLIDGYCKAGEIHKAIRLYHEMIGKGIAPNVYTFTALISGLCRANRMPEANDLFDEMV 577

Query: 541 RDNVSLNHIPF 573
           + N+  N + +
Sbjct: 578 KRNIMPNEVTY 588



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1    EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
            ++M    IMPN  TYN +I  +  +   +T++   +  +M+   + P+ YTY  LI  +C
Sbjct: 574  DEMVKRNIMPNEVTYNVMIEEYCCEG--NTTRAFELLDEMVENGLTPDTYTYRPLISGLC 631

Query: 181  KRNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
                  +A  F++++ K    +  +  + ++      G + +AL   ++MI  GV+ +L 
Sbjct: 632  STGRVSEAKEFVDDLHKENRDLNEMCYSALLHGYCKEGRLKDALSACHEMIERGVDMDLV 691

Query: 358  IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
             Y  +I+             + K +  +  +P+  +Y++ I +  K+ K ++A  ++  M
Sbjct: 692  CYAILINGTLKQQDTRKLFSLLKAMCDQQLRPDNIIYTSMIDAYGKSGKLKEAFGVWDIM 751

Query: 538  VRDNVSLNHIPFTA 579
            V +    N + +TA
Sbjct: 752  VGEGCIPNVVTYTA 765



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 47/191 (24%), Positives = 78/191 (40%)
 Frame = +1

Query: 7    MNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKR 186
            M   G +PN  TY  LI  H    +  T++ E +  QML     PN  TY   ++ +   
Sbjct: 751  MVGEGCIPNVVTYTALI--HGLCKAGYTTQAERLCEQMLISDSPPNRITYGCFLNHLIND 808

Query: 187  NNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
             N  KA++    M        V  N +I      G    A  L   M++ G+ P+   Y+
Sbjct: 809  GNMEKATQLHKAMLEGLLANTVTYNMLIHGFCKMGKFEEASELLVGMMNNGIFPDCITYS 868

Query: 367  TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
            T+I           A +++  +L KG KP+   Y+  I       +  KA ++   M+R 
Sbjct: 869  TLIYEYCKRGNLQEATRLWDTMLDKGLKPDALAYNFLIHGCCVTGELNKAFELRDDMMRR 928

Query: 547  NVSLNHIPFTA 579
             +  N   +++
Sbjct: 929  GLMPNQFTYSS 939



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
 Frame = +1

Query: 1    EKMNASGIMPNTETY----NHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLI 168
            E+M  S   PN  TY    NHLI      N  +  K   ++  ML + +  N  TY +LI
Sbjct: 784  EQMLISDSPPNRITYGCFLNHLI------NDGNMEKATQLHKAML-EGLLANTVTYNMLI 836

Query: 169  DAMCKRNNFLKASRFLNEMKRK--FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGV 342
               CK   F +AS  L  M     FP   +  + +I      G++  A RL++ M+  G+
Sbjct: 837  HGFCKMGKFEEASELLVGMMNNGIFPDC-ITYSTLIYEYCKRGNLQEATRLWDTMLDKGL 895

Query: 343  EPNLFIYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKA 516
            +P+   Y  +I    V+   + A ++  +++ +G  PN + YS+ +     A   Q A
Sbjct: 896  KPDALAYNFLIHGCCVTGELNKAFELRDDMMRRGLMPNQFTYSSLMQGTCLASTVQPA 953



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 2/191 (1%)
 Frame = +1

Query: 13  ASGIMPNTETYNHLIYAHSRDNST-DTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRN 189
           ++G   +  TYN LI+   + +   +   ++N+  Q   + ++ +  TY  L+   C+  
Sbjct: 298 SNGCALSVVTYNVLIHGLCKSHRAWEAVGVKNLLGQ---KGLKADVVTYCTLVLGFCRVQ 354

Query: 190 NFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
            F      ++EM    F  +  AL+ ++      G I +A  L N++  VGV PNLF+Y 
Sbjct: 355 EFEIGVDLMDEMMELGFVPSEAALSGLVDGLRKKGKIEDAFDLVNKVSGVGVVPNLFVYN 414

Query: 367 TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
           ++I+      +   A  +F  +  KG  PN   YS  I S  +  +   A++   +M   
Sbjct: 415 SLINSLCKDGKIDKAESLFSNMDKKGLFPNDITYSILIDSFCRRGELDVAVRYLDKMSDT 474

Query: 547 NVSLNHIPFTA 579
            +     P+ +
Sbjct: 475 GIRATVYPYNS 485


>gb|KCW88273.1| hypothetical protein EUGRSUZ_A00652 [Eucalyptus grandis]
          Length = 447

 Score =  101 bits (251), Expect = 1e-21
 Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   G+ PN  TYN LI  H   NS + SK  ++  QML+  ++PN  TY +LI    
Sbjct: 163 EEMERQGLKPNLVTYNSLINGHC--NSGEISKAVSLRDQMLSSGLKPNIITYNVLIHGFG 220

Query: 181 KRNNFLKASRFLNEMKRKFPITNVA-LNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K   F +A   L+ ++++  + NV   N +I     SG I  A  ++  M S GV P++ 
Sbjct: 221 KNGMFKEAKEMLDVIEKEGLVPNVVTFNILIDACCNSGKIEEAFLIHASMASKGVLPDIL 280

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y ++I+      +   A K+F E+     KPNV  Y+  I SL K ++++KA ++  +M
Sbjct: 281 TYNSLITGLCREGKMDKAEKLFGEMKDNSLKPNVVTYNILIGSLCKKRESRKAHRLLDRM 340

Query: 538 VRDNVSLNHIPF 573
           V+  +S NH+ +
Sbjct: 341 VKIGLSPNHVTY 352



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNS-TDTSKIENIYLQMLAQRVEPNHYTYELLIDAM 177
           E M A G+ PN  TYN LI  H +    T   K +    +M+  ++ PN  TY +L+D  
Sbjct: 90  EDMKACGVSPNVVTYNALIDGHCKSGGLTRMYKADATLKEMIESKIRPNEITYNILMDGY 149

Query: 178 CKRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           CK  N + A +   EM+R+                                  G++PNL 
Sbjct: 150 CKDENMVAAVKVFEEMERQ----------------------------------GLKPNLV 175

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y ++I+    S   S AV +  ++L+ G KPN+  Y+  I    K    ++A ++   +
Sbjct: 176 TYNSLINGHCNSGEISKAVSLRDQMLSSGLKPNIITYNVLIHGFGKNGMFKEAKEMLDVI 235

Query: 538 VRDNVSLNHIPF 573
            ++ +  N + F
Sbjct: 236 EKEGLVPNVVTF 247



 Score = 68.6 bits (166), Expect = 4e-10
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
 Frame = +1

Query: 19  GIMPNTETYNHLIYAHSRDNSTDTSKIENIYL---QMLAQRVEPNHYTYELLIDAMCKRN 189
           G++PN  T+N LI     D   ++ KIE  +L    M ++ V P+  TY  LI  +C+  
Sbjct: 239 GLVPNVVTFNILI-----DACCNSGKIEEAFLIHASMASKGVLPDILTYNSLITGLCREG 293

Query: 190 NFLKASRFLNEMKRKFPITNVAL-NPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
              KA +   EMK      NV   N +I       +   A RL ++M+ +G+ PN   Y 
Sbjct: 294 KMDKAEKLFGEMKDNSLKPNVVTYNILIGSLCKKRESRKAHRLLDRMVKIGLSPNHVTYD 353

Query: 367 TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
           T++           AVK+ + +  +G + N+  ++  I    K  K + A  +  +M+  
Sbjct: 354 TLMDGYCTEGNLRAAVKVRELMQKEGLRANIATFNVLIKGFCKQGKLENANSLLNEMLER 413

Query: 547 NVSLNHIPF 573
            +  N   +
Sbjct: 414 GMVPNRTTY 422



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
 Frame = +1

Query: 76  NSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASRFLNEMKRKFPITN-V 252
           N      +E +Y +M+  R++ N  ++  LI  +CK     KA   + +MK      N V
Sbjct: 43  NEGAVGDLEWVYKEMIRGRIKLNVVSFNTLISGLCKARKLNKARDVVEDMKACGVSPNVV 102

Query: 253 ALNPIIRHQTLSGDINNALR---LYNQMISVGVEPNLFIYTTIISLATVSSRHSLAVKIF 423
             N +I     SG +    +      +MI   + PN   Y  ++           AVK+F
Sbjct: 103 TYNALIDGHCKSGGLTRMYKADATLKEMIESKIRPNEITYNILMDGYCKDENMVAAVKVF 162

Query: 424 KELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPF 573
           +E+  +G KPN+  Y++ I     + +  KA+ +  QM+   +  N I +
Sbjct: 163 EEMERQGLKPNLVTYNSLINGHCNSGEISKAVSLRDQMLSSGLKPNIITY 212


>ref|XP_010040584.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820
           [Eucalyptus grandis]
 ref|XP_010040641.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820
           [Eucalyptus grandis]
 ref|XP_010040692.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820
           [Eucalyptus grandis]
 ref|XP_010040755.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820
           [Eucalyptus grandis]
 ref|XP_018726974.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09820
           [Eucalyptus grandis]
          Length = 626

 Score =  101 bits (251), Expect = 2e-21
 Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M   G+ PN  TYN LI  H   NS + SK  ++  QML+  ++PN  TY +LI    
Sbjct: 342 EEMERQGLKPNLVTYNSLINGHC--NSGEISKAVSLRDQMLSSGLKPNIITYNVLIHGFG 399

Query: 181 KRNNFLKASRFLNEMKRKFPITNVA-LNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K   F +A   L+ ++++  + NV   N +I     SG I  A  ++  M S GV P++ 
Sbjct: 400 KNGMFKEAKEMLDVIEKEGLVPNVVTFNILIDACCNSGKIEEAFLIHASMASKGVLPDIL 459

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y ++I+      +   A K+F E+     KPNV  Y+  I SL K ++++KA ++  +M
Sbjct: 460 TYNSLITGLCREGKMDKAEKLFGEMKDNSLKPNVVTYNILIGSLCKKRESRKAHRLLDRM 519

Query: 538 VRDNVSLNHIPF 573
           V+  +S NH+ +
Sbjct: 520 VKIGLSPNHVTY 531



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNS-TDTSKIENIYLQMLAQRVEPNHYTYELLIDAM 177
           E M A G+ PN  TYN LI  H +    T   K +    +M+  ++ PN  TY +L+D  
Sbjct: 269 EDMKACGVSPNVVTYNALIDGHCKSGGLTRMYKADATLKEMIESKIRPNEITYNILMDGY 328

Query: 178 CKRNNFLKASRFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           CK  N + A +   EM+R+                                  G++PNL 
Sbjct: 329 CKDENMVAAVKVFEEMERQ----------------------------------GLKPNLV 354

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y ++I+    S   S AV +  ++L+ G KPN+  Y+  I    K    ++A ++   +
Sbjct: 355 TYNSLINGHCNSGEISKAVSLRDQMLSSGLKPNIITYNVLIHGFGKNGMFKEAKEMLDVI 414

Query: 538 VRDNVSLNHIPF 573
            ++ +  N + F
Sbjct: 415 EKEGLVPNVVTF 426



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 4/189 (2%)
 Frame = +1

Query: 19  GIMPNTETYNHLIYAHSRDNSTDTSKIENIYL---QMLAQRVEPNHYTYELLIDAMCKRN 189
           G++PN  T+N LI     D   ++ KIE  +L    M ++ V P+  TY  LI  +C+  
Sbjct: 418 GLVPNVVTFNILI-----DACCNSGKIEEAFLIHASMASKGVLPDILTYNSLITGLCREG 472

Query: 190 NFLKASRFLNEMKRKFPITNVAL-NPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYT 366
              KA +   EMK      NV   N +I       +   A RL ++M+ +G+ PN   Y 
Sbjct: 473 KMDKAEKLFGEMKDNSLKPNVVTYNILIGSLCKKRESRKAHRLLDRMVKIGLSPNHVTYD 532

Query: 367 TIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRD 546
           T++           AVK+ + +  +G + N+  ++  I    K  K + A  +  +M+  
Sbjct: 533 TLMDGYCTEGNLRAAVKVRELMQKEGLRANIATFNVLIKGFCKQGKLENANSLLNEMLER 592

Query: 547 NVSLNHIPF 573
            +  N   +
Sbjct: 593 GMVPNRTTY 601



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
 Frame = +1

Query: 76  NSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKASRFLNEMKRKFPITN-V 252
           N      +E +Y +M+  R++ N  ++  LI  +CK     KA   + +MK      N V
Sbjct: 222 NEGAVGDLEWVYKEMIRGRIKLNVVSFNTLISGLCKARKLNKARDVVEDMKACGVSPNVV 281

Query: 253 ALNPIIRHQTLSGDINNALR---LYNQMISVGVEPNLFIYTTIISLATVSSRHSLAVKIF 423
             N +I     SG +    +      +MI   + PN   Y  ++           AVK+F
Sbjct: 282 TYNALIDGHCKSGGLTRMYKADATLKEMIESKIRPNEITYNILMDGYCKDENMVAAVKVF 341

Query: 424 KELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPF 573
           +E+  +G KPN+  Y++ I     + +  KA+ +  QM+   +  N I +
Sbjct: 342 EEMERQGLKPNLVTYNSLINGHCNSGEISKAVSLRDQMLSSGLKPNIITY 391


>ref|XP_020202863.1| putative pentatricopeptide repeat-containing protein At5g59900
           [Cajanus cajan]
 gb|KYP39662.1| Putative pentatricopeptide repeat-containing protein At5g59900
           family [Cajanus cajan]
          Length = 893

 Score =  100 bits (250), Expect = 3e-21
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           K+   G MPN   YN LI  +S     D  K E++Y  M    + PN  TY +LID+ C+
Sbjct: 351 KVGRFGFMPNLFVYNALI--NSLCKGEDLDKAESLYNNMRLMNLRPNGITYSILIDSFCR 408

Query: 184 RNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
           R     A  + + M +     T  A N +I  Q   GD++ A  L+ +MI+ GVEP    
Sbjct: 409 RGRLDVAISYFDRMIEDGIRETVYAYNSLINGQCKFGDLSAAESLFTEMINKGVEPTATT 468

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           +T++IS      +   A K++ E++ KG  PN+Y ++A I+ L    K  +A K+F ++V
Sbjct: 469 FTSLISGYCKDLQLQKAFKLYNEMVEKGITPNIYTFTALISGLCGTNKMAEASKLFDELV 528

Query: 541 RDNVSLNHIPF 573
              +    + +
Sbjct: 529 ERKIKPTEVTY 539



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/172 (25%), Positives = 75/172 (43%)
 Frame = +1

Query: 28   PNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLKAS 207
            PN  TY  L+    +    D  K  +++ +M A  V PN  TY   ++ + K  N  +A 
Sbjct: 709  PNVVTYTALMNGLCKAGEMD--KAGHLFKKMQAASVSPNSITYGCFLNCLSKEGNMKEAI 766

Query: 208  RFLNEMKRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLAT 387
               + M +      V  N IIR     G    A ++ ++M   G+ P+   Y+T+I    
Sbjct: 767  GLHHAMLKGLLANTVTYNIIIRGFCKLGRFQEATKVLSEMTENGIFPDCITYSTLIYEYC 826

Query: 388  VSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVR 543
             S     AVK++  +L KG +P++   +  I       +  KA ++   M+R
Sbjct: 827  RSGNVGPAVKLWDNMLNKGLEPDLVACNLLIYGCCVNGEIDKAFELRDDMLR 878



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
 Frame = +1

Query: 1    EKMNASGIMPNTETYNHLIYAHSRD-NSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAM 177
            +KM A+ + PN+ TY   +   S++ N  +   + +  L+ L      N  TY ++I   
Sbjct: 735  KKMQAASVSPNSITYGCFLNCLSKEGNMKEAIGLHHAMLKGLLA----NTVTYNIIIRGF 790

Query: 178  CKRNNFLKASRFLNEMKRK--FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPN 351
            CK   F +A++ L+EM     FP   +  + +I     SG++  A++L++ M++ G+EP+
Sbjct: 791  CKLGRFQEATKVLSEMTENGIFPDC-ITYSTLIYEYCRSGNVGPAVKLWDNMLNKGLEPD 849

Query: 352  LFIYTTIISLATVSSRHSLAVKIFKELLAKGHKP 453
            L     +I    V+     A ++  ++L +G KP
Sbjct: 850  LVACNLLIYGCCVNGEIDKAFELRDDMLRRGMKP 883



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 57/224 (25%), Positives = 92/224 (41%), Gaps = 40/224 (17%)
 Frame = +1

Query: 22   IMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCKRNNFLK 201
            I P   TYN LI  + RD + D  K   +   ML + + P+ YTY  LI  +C      K
Sbjct: 532  IKPTEVTYNVLIEGYCRDGNID--KAFELLEGMLQKGLVPDTYTYRPLISGLCSTGRVSK 589

Query: 202  ASRFLNEMKRKFPITNVALNPIIRHQTLSGD----------------------------- 294
            A  F++ +  +    NV LN +     L G                              
Sbjct: 590  AKDFIDGLHEQ----NVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHA 645

Query: 295  --INNALRLYNQ---------MISVGVEPNLFIYTTIISLATVSSRHSLAVKIFKELLAK 441
              I+ AL+L ++         M   G+ P+  IYT++I   + +     A + +  ++ +
Sbjct: 646  VLIDGALKLPDRKTLFGLLKDMHDQGLRPDNVIYTSMIDAYSKAGSFKKAFECWDLMVTE 705

Query: 442  GHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPF 573
               PNV  Y+A +  L KA +  KA  +F++M   +VS N I +
Sbjct: 706  ECFPNVVTYTALMNGLCKAGEMDKAGHLFKKMQAASVSPNSITY 749


>ref|XP_007016495.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Theobroma cacao]
 gb|EOY34114.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 910

 Score =  100 bits (250), Expect = 3e-21
 Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           +K+   G+ PN   YN LI +  RD   D +++  ++ +M ++ + PN  TY +LID+ C
Sbjct: 354 KKVGELGVAPNLFVYNALINSLCRDGKFDEAEL--LFNEMESKGLNPNDVTYSILIDSFC 411

Query: 181 KRNNFLKASRFLNEMK-RKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           +R     A  FL +M      +T    N +I      G+++ A    ++MI+ G++P + 
Sbjct: 412 RRGKMDIALSFLGKMMVAGIKVTVYPYNSLISGHCKVGNLSLAESFLSEMINKGLQPTVI 471

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            YT+++S      +   A +++ E+  KG  PN Y Y+A I+ L +A    +AI++F QM
Sbjct: 472 TYTSLLSGYCNEGKLHKAFRLYHEMTGKGIAPNTYTYTALISGLCRANMMAEAIRLFGQM 531

Query: 538 VRDNVSLNHIPF 573
           V  N+  N + +
Sbjct: 532 VERNIVPNEVTY 543



 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           +M + G+ PN  TY+ LI +  R    D +   +   +M+   ++   Y Y  LI   CK
Sbjct: 390 EMESKGLNPNDVTYSILIDSFCRRGKMDIAL--SFLGKMMVAGIKVTVYPYNSLISGHCK 447

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
             N   A  FL+EM  K    T +    ++      G ++ A RLY++M   G+ PN + 
Sbjct: 448 VGNLSLAESFLSEMINKGLQPTVITYTSLLSGYCNEGKLHKAFRLYHEMTGKGIAPNTYT 507

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YT +IS    ++  + A+++F +++ +   PN   Y+  I    +     KA ++  +MV
Sbjct: 508 YTALISGLCRANMMAEAIRLFGQMVERNIVPNEVTYNVLIEGRCRDGNMVKAFELLDEMV 567



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           KM  +GI      YN LI  H +  +   S  E+   +M+ + ++P   TY  L+   C 
Sbjct: 425 KMMVAGIKVTVYPYNSLISGHCKVGNL--SLAESFLSEMINKGLQPTVITYTSLLSGYCN 482

Query: 184 RNNFLKASRFLNEMKRKFPITNV-ALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
                KA R  +EM  K    N      +I     +  +  A+RL+ QM+   + PN   
Sbjct: 483 EGKLHKAFRLYHEMTGKGIAPNTYTYTALISGLCRANMMAEAIRLFGQMVERNIVPNEVT 542

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y  +I           A ++  E++ +G  P+ Y Y   I+ L    +  +A +    + 
Sbjct: 543 YNVLIEGRCRDGNMVKAFELLDEMVERGLVPDTYTYRPLISGLCATGRVSEAKEFMDGLH 602

Query: 541 RDNVSLNHIPFTA 579
           RD+  LN + ++A
Sbjct: 603 RDHHKLNEMCYSA 615



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
 Frame = +1

Query: 4    KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
            +M   GI PNT TY  LI    R N    ++   ++ QM+ + + PN  TY +LI+  C+
Sbjct: 495  EMTGKGIAPNTYTYTALISGLCRANMM--AEAIRLFGQMVERNIVPNEVTYNVLIEGRCR 552

Query: 184  RNNFLKASRFLNEMKRKFPITNV-ALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
              N +KA   L+EM  +  + +     P+I     +G ++ A    + +     + N   
Sbjct: 553  DGNMVKAFELLDEMVERGLVPDTYTYRPLISGLCATGRVSEAKEFMDGLHRDHHKLNEMC 612

Query: 361  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
            Y+ ++       +   A+   ++++A+G   ++  Y   I   ++   TQK   + ++M 
Sbjct: 613  YSALLHGYCKEGKLEDALSACRDMVARGIDMDLVCYGVLIDGTLRQHDTQKLFGLLKEMD 672

Query: 541  RDNVSLNHIPFTA 579
               +S +++ +T+
Sbjct: 673  DQGLSPDNVIYTS 685



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           +M ++G   N   YN  ++ H    S    +   I   ++ + +  +  TY  L+  +C+
Sbjct: 250 QMESNGSELNVVVYN--VFIHGLCKSQRAWEAVEIKNGLVQRGLRADVVTYRTLVLGLCR 307

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
              F  A   + EM    F  +   ++ ++      G I NA  L  ++  +GV PNLF+
Sbjct: 308 VEAFDVALELMKEMMELGFLPSEAVVSSLVDGLRRKGKIENAFGLIKKVGELGVAPNLFV 367

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y  +I+      +   A  +F E+ +KG  PN   YS  I S  +  K   A+    +M+
Sbjct: 368 YNALINSLCRDGKFDEAELLFNEMESKGLNPNDVTYSILIDSFCRRGKMDIALSFLGKMM 427

Query: 541 RDNVSLNHIPFTA 579
              + +   P+ +
Sbjct: 428 VAGIKVTVYPYNS 440


>ref|XP_020241481.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241482.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241483.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241484.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241485.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241486.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241487.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241488.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
 ref|XP_020241489.1| protein Rf1, mitochondrial-like isoform X1 [Asparagus officinalis]
          Length = 846

 Score =  100 bits (249), Expect = 4e-21
 Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
 Frame = +1

Query: 4    KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
            KM  +G  PN  +Y+ L+    +    + ++I  I L+M+ + V P+  TY +L+   C+
Sbjct: 458  KMQRAGEQPNIVSYSTLLDGLCKAGRMEDAEI--ILLEMVEKGVNPDVITYNILVSGFCR 515

Query: 184  RNNFLKASRFLNEMK-RKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
               +    R L+EM  R F   +V  N +I      G +  A RL N M+  GVEPN   
Sbjct: 516  LGKWDDTLRLLSEMSDRGFHQNDVTYNTVIDALCKEGKVMEARRLLNVMVQRGVEPNTIT 575

Query: 361  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
            Y+T++    +      A+K+F  +LAKG+KP  + YS  I S  K+ +  +A+KIF++M 
Sbjct: 576  YSTLMDGYCLVGEMDEALKVFNLMLAKGYKPTAFTYSILINSYCKSDRIDRALKIFEEMP 635

Query: 541  RDNVSLNHI 567
            +  +   ++
Sbjct: 636  KKGLKQTNV 644



 Score = 91.7 bits (226), Expect = 5e-18
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 1/185 (0%)
 Frame = +1

Query: 4    KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
            +M   G+ P+  TYN L+    R    D +    +  +M  +    N  TY  +IDA+CK
Sbjct: 493  EMVEKGVNPDVITYNILVSGFCRLGKWDDTL--RLLSEMSDRGFHQNDVTYNTVIDALCK 550

Query: 184  RNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
                ++A R LN M +R      +  + ++    L G+++ AL+++N M++ G +P  F 
Sbjct: 551  EGKVMEARRLLNVMVQRGVEPNTITYSTLMDGYCLVGEMDEALKVFNLMLAKGYKPTAFT 610

Query: 361  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
            Y+ +I+    S R   A+KIF+E+  KG K    +Y   +T L +A +   A K+  +M+
Sbjct: 611  YSILINSYCKSDRIDRALKIFEEMPKKGLKQTNVIYHTMLTGLYQAGRVSDARKMHDKMI 670

Query: 541  RDNVS 555
            RD V+
Sbjct: 671  RDKVA 675



 Score = 88.2 bits (217), Expect = 8e-17
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
 Frame = +1

Query: 1   EKMNASG-IMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAM 177
           +KM   G + PN  TYN +I AH +      +    +Y +M++  + PN  TY  +IDA 
Sbjct: 211 KKMKIEGEVEPNAVTYNTIIDAHCKQGVMHNAT--KVYEEMISSGITPNVVTYNTIIDAF 268

Query: 178 CKRNNFLKASRFLNEMKRKFPITNVAL-NPIIRHQTLSGDINNALRLYNQMISVGVEPNL 354
           CK+     A+     M       NV   + II      G ++NA ++Y +MIS G+ P++
Sbjct: 269 CKQGAMDNATIIYEAMISAGITPNVVTYSTIIAALCKRGAMDNAAKIYEEMISSGITPDV 328

Query: 355 FIYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQ 534
             Y  II   ++  +   A+++ KE++ +G  P+V  +S+ + SL K   T +A K+   
Sbjct: 329 VTYNCIIGGHSIRGQWKEAMRVLKEMVDRGLSPDVITFSSLMDSLCKQGNTCEAHKLLNM 388

Query: 535 MVRDNVSLN 561
           M    V  N
Sbjct: 389 MAERGVKPN 397



 Score = 84.7 bits (208), Expect = 1e-15
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           ++M   G  PN  T+N +I       +T  + IE +    +   VEPN  TY  +IDA C
Sbjct: 176 DRMPQWGCKPNVVTHNTIIKGLCSLGNTSLA-IELLKKMKIEGEVEPNAVTYNTIIDAHC 234

Query: 181 KRNNFLKASRFLNEMKRKFPITNVAL-NPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           K+     A++   EM       NV   N II      G ++NA  +Y  MIS G+ PN+ 
Sbjct: 235 KQGVMHNATKVYEEMISSGITPNVVTYNTIIDAFCKQGAMDNATIIYEAMISAGITPNVV 294

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            Y+TII+          A KI++E+++ G  P+V  Y+  I       + ++A+++ ++M
Sbjct: 295 TYSTIIAALCKRGAMDNAAKIYEEMISSGITPDVVTYNCIIGGHSIRGQWKEAMRVLKEM 354

Query: 538 VRDNVSLNHIPFTA 579
           V   +S + I F++
Sbjct: 355 VDRGLSPDVITFSS 368



 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 60/228 (26%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           E+M +SGI PN  TYN +I A  +  + D + I  IY  M++  + PN  TY  +I A+C
Sbjct: 247 EEMISSGITPNVVTYNTIIDAFCKQGAMDNATI--IYEAMISAGITPNVVTYSTIIAALC 304

Query: 181 KRNNFLKASRFLNEMKRKFPITNVAL-NPIIRHQTLSGDINNALR--------------- 312
           KR     A++   EM       +V   N II   ++ G    A+R               
Sbjct: 305 KRGAMDNAAKIYEEMISSGITPDVVTYNCIIGGHSIRGQWKEAMRVLKEMVDRGLSPDVI 364

Query: 313 --------------------LYNQMISVGVEPNLFIYTTIISLATVSSRHSLAVKIFKEL 432
                               L N M   GV+PN F Y T+++      R     +I   +
Sbjct: 365 TFSSLMDSLCKQGNTCEAHKLLNMMAERGVKPNTFSYNTLLNGYCKEGRFEEVSRILDSI 424

Query: 433 LAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMVRDNVSLNHIPFT 576
              G   NVY Y+  I    K  +  +A+ +F++M R     N + ++
Sbjct: 425 QKDGLAFNVYTYNIMIDCYKKTNRIDEAMHLFRKMQRAGEQPNIVSYS 472



 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 34/213 (15%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHS---------------------RDNSTDTSKIENI--- 108
           E+M +SGI P+  TYN +I  HS                      D  T +S ++++   
Sbjct: 317 EEMISSGITPDVVTYNCIIGGHSIRGQWKEAMRVLKEMVDRGLSPDVITFSSLMDSLCKQ 376

Query: 109 --------YLQMLAQR-VEPNHYTYELLIDAMCKRNNFLKASRFLNEMKRKFPITNV-AL 258
                    L M+A+R V+PN ++Y  L++  CK   F + SR L+ +++     NV   
Sbjct: 377 GNTCEAHKLLNMMAERGVKPNTFSYNTLLNGYCKEGRFEEVSRILDSIQKDGLAFNVYTY 436

Query: 259 NPIIRHQTLSGDINNALRLYNQMISVGVEPNLFIYTTIISLATVSSRHSLAVKIFKELLA 438
           N +I     +  I+ A+ L+ +M   G +PN+  Y+T++     + R   A  I  E++ 
Sbjct: 437 NIMIDCYKKTNRIDEAMHLFRKMQRAGEQPNIVSYSTLLDGLCKAGRMEDAEIILLEMVE 496

Query: 439 KGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
           KG  P+V  Y+  ++   +  K    +++  +M
Sbjct: 497 KGVNPDVITYNILVSGFCRLGKWDDTLRLLSEM 529



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
 Frame = +1

Query: 133 VEPNHYTYELLIDAMCKRNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNAL 309
           + P+ YTY +LI      N       FL  M KR +    V  + +I        +++A 
Sbjct: 113 ISPDGYTYGVLIGCCSSINRVDLGFGFLGSMMKRGWYGDVVIFSSLIDGLCKQNKVDDAA 172

Query: 310 RLYNQMISVGVEPNLFIYTTIISLATVSSRHSLAVKIFKELLAKGH-KPNVYVYSAFITS 486
           RL ++M   G +PN+  + TII         SLA+++ K++  +G  +PN   Y+  I +
Sbjct: 173 RLLDRMPQWGCKPNVVTHNTIIKGLCSLGNTSLAIELLKKMKIEGEVEPNAVTYNTIIDA 232

Query: 487 LVKAKKTQKAIKIFQQMVRDNVSLNHIPF 573
             K      A K++++M+   ++ N + +
Sbjct: 233 HCKQGVMHNATKVYEEMISSGITPNVVTY 261


>ref|XP_021277825.1| putative pentatricopeptide repeat-containing protein At5g59900
           [Herrania umbratica]
          Length = 899

 Score =  100 bits (249), Expect = 4e-21
 Identities = 56/192 (29%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   EKMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMC 180
           +K+   G+ PN   YN LI +  +D   D +++  ++ +M ++ + PN  TY +LID+ C
Sbjct: 354 KKVGELGVAPNLFVYNALINSLCKDGKFDEAEL--LFNEMESKGLNPNDVTYSILIDSFC 411

Query: 181 KRNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLF 357
           +R     A  FL +M      +T    N +I      G+++ A    ++MI+ G++P + 
Sbjct: 412 RRGKMDIALSFLGKMMEAGIKVTVYPYNSLISGHCKVGNLSLAESFLSEMINKGLQPTVI 471

Query: 358 IYTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQM 537
            YT+++S      +   A +++ E+  KG  PN Y Y+A I+ L +A    +AI++F QM
Sbjct: 472 TYTSLLSGYCNEGKLHKAFRLYHEMTGKGIAPNTYTYTALISGLCRANMMAEAIRLFGQM 531

Query: 538 VRDNVSLNHIPF 573
           V  N+  N + +
Sbjct: 532 VERNILPNEVTY 543



 Score = 73.9 bits (180), Expect = 7e-12
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 1/180 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           +M + G+ PN  TY+ LI +  R    D +   +   +M+   ++   Y Y  LI   CK
Sbjct: 390 EMESKGLNPNDVTYSILIDSFCRRGKMDIAL--SFLGKMMEAGIKVTVYPYNSLISGHCK 447

Query: 184 RNNFLKASRFLNEMKRK-FPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
             N   A  FL+EM  K    T +    ++      G ++ A RLY++M   G+ PN + 
Sbjct: 448 VGNLSLAESFLSEMINKGLQPTVITYTSLLSGYCNEGKLHKAFRLYHEMTGKGIAPNTYT 507

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           YT +IS    ++  + A+++F +++ +   PN   Y+  I          KA ++  +MV
Sbjct: 508 YTALISGLCRANMMAEAIRLFGQMVERNILPNEVTYNVLIEGHCGDGNMVKAFELLDEMV 567



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 43/193 (22%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
 Frame = +1

Query: 4    KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
            +M   GI PNT TY  LI    R N    ++   ++ QM+ + + PN  TY +LI+  C 
Sbjct: 495  EMTGKGIAPNTYTYTALISGLCRANMM--AEAIRLFGQMVERNILPNEVTYNVLIEGHCG 552

Query: 184  RNNFLKASRFLNEMKRKFPITNV-ALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
              N +KA   L+EM  K  + +     P+I     +G ++ A    + +     + N   
Sbjct: 553  DGNMVKAFELLDEMVGKGLVPDTYTYRPLISGLCATGRVSEAKEFMDGLHRDHHKLNEMC 612

Query: 361  YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
            Y+ ++       +   A+   ++++A+G   ++  Y   I   ++   T++   + ++M 
Sbjct: 613  YSALLHGYCKEGKLEDALSACRDMVAQGIDMDLVCYGVLIDGTLRQHDTRRLFGLLKEMD 672

Query: 541  RDNVSLNHIPFTA 579
               +S +++ +T+
Sbjct: 673  DQGLSPDNVIYTS 685



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 1/193 (0%)
 Frame = +1

Query: 4   KMNASGIMPNTETYNHLIYAHSRDNSTDTSKIENIYLQMLAQRVEPNHYTYELLIDAMCK 183
           +M  +G   N   YN  ++ H    S    +   I   ++ + +  +  TY  L+  +C+
Sbjct: 250 QMELNGSELNVVVYN--VFIHGLCKSQRAWEAVEIKNGLVQRGLRADVVTYRTLVLGLCR 307

Query: 184 RNNFLKASRFLNEM-KRKFPITNVALNPIIRHQTLSGDINNALRLYNQMISVGVEPNLFI 360
              F  A   + EM +  F  +   ++ ++      G   +A  L  ++  +GV PNLF+
Sbjct: 308 VEAFDVAVELMKEMIELGFLPSEAVVSSLVDGLRRKGKTEDAFGLIKKVGELGVAPNLFV 367

Query: 361 YTTIISLATVSSRHSLAVKIFKELLAKGHKPNVYVYSAFITSLVKAKKTQKAIKIFQQMV 540
           Y  +I+      +   A  +F E+ +KG  PN   YS  I S  +  K   A+    +M+
Sbjct: 368 YNALINSLCKDGKFDEAELLFNEMESKGLNPNDVTYSILIDSFCRRGKMDIALSFLGKMM 427

Query: 541 RDNVSLNHIPFTA 579
              + +   P+ +
Sbjct: 428 EAGIKVTVYPYNS 440