BLASTX nr result

ID: Ophiopogon26_contig00049395 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00049395
         (679 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC29113.1| hypothetical protein RIR_1490000 [Rhizophagus ir...    56   1e-13
dbj|GBC14430.1| hypothetical protein RIR_0297800 [Rhizophagus ir...    56   9e-07

>dbj|GBC29113.1| hypothetical protein RIR_1490000 [Rhizophagus irregularis DAOM
           181602]
          Length = 761

 Score = 56.2 bits (134), Expect(3) = 1e-13
 Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
 Frame = +2

Query: 77  LKESHTEIDIESNPFIRENGSSNTPAERLARVLTQMK-------NCRYTSNLCHXXXXXX 235
           L+ SHT++D+E+NPFI E+G +NTP  R+ RVLTQ +        C Y +N         
Sbjct: 141 LEASHTKVDLETNPFICEDGYNNTPENRITRVLTQTEYLTAIKTRCPYPNN----TFTCG 196

Query: 236 XXXXXREYLVIVNTHILKQYICLLWLSQIAGVNYIGCDKWNDHE 367
                + YLV    H   Q+             +IGCDKW  +E
Sbjct: 197 GKAKIKHYLV----HTTNQW-----------SEFIGCDKWKPNE 225



 Score = 42.7 bits (99), Expect(3) = 1e-13
 Identities = 35/104 (33%), Positives = 47/104 (45%)
 Frame = +1

Query: 367 VDVNLLRSLFANEG*ITNHEAYFYEFIITLNLHIYNNFIG*HVGFSS*IL*VEFL*YFYI 546
           VD+NLL+SLFAN+G I + E          N +                          +
Sbjct: 237 VDINLLKSLFANQGKILDQED-------DTNCN--------------------------M 263

Query: 547 IFKATVHLFQGSIAAYCLLS*IKILTPLYLKRFPFVILLSKGIH 678
           ++    H        YC+    K+LTPL L+RFPFVIL+SKGIH
Sbjct: 264 LYPTGCH------KKYCVE--FKMLTPLNLQRFPFVILISKGIH 299



 Score = 25.4 bits (54), Expect(3) = 1e-13
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 6   VQISKGDKTMWRVKSCQLANSDIF*KSH 89
           VQ+ K  K    +K+CQLA  +I   SH
Sbjct: 118 VQVKKAIKHCGGIKTCQLAGPNILEASH 145


>dbj|GBC14430.1| hypothetical protein RIR_0297800 [Rhizophagus irregularis DAOM
           181602]
          Length = 1043

 Score = 55.8 bits (133), Expect(2) = 9e-07
 Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 10/192 (5%)
 Frame = +2

Query: 77  LKESHTEIDIESNPFIRENGSSNTPAERLARVLTQMKNCRYTSNLCHXXXXXXXXXXXRE 256
           L+ SHT++D+E+NPFI E+G +NTP  R+ RVLT+ +        C             +
Sbjct: 403 LEASHTKVDLETNPFICEDGYNNTPENRITRVLTRTEYLTAIKTRCPYPNNNFTCGGKAK 462

Query: 257 YLVIVNTHILKQYICLLWLSQIAGVNYIGCDKWNDHE*MLIF*DHF-LQMKD--ELQIMK 427
                    +K Y  +   +Q +   +IGCDKW  +E       H  LQ+K   ++ ++K
Sbjct: 463 ---------IKHYYLVYTTNQWS--EFIGCDKWKPNE-----KGHMSLQIKAGVDINLLK 506

Query: 428 LIFMNL**H*TCIYIIIL*DDT-------SDSHHKYCXXXXXXXXXXXXXXXXXXXXVQL 586
            +F N         I+   DDT       +  H KYC                    ++L
Sbjct: 507 SLFANQ------GKILDQEDDTNCNMLYPTGCHKKYC----------VHLFQGLTQKLEL 550

Query: 587 QHIVCSVELKYL 622
           + + CSVE K L
Sbjct: 551 KRLPCSVEFKML 562



 Score = 25.4 bits (54), Expect(2) = 9e-07
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 6   VQISKGDKTMWRVKSCQLANSDIF*KSH 89
           VQ+ K  K    +K+CQLA  +I   SH
Sbjct: 380 VQVKKAIKHCGGIKTCQLAGPNILEASH 407


Top