BLASTX nr result

ID: Ophiopogon26_contig00049258 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00049258
         (784 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX76145.1| DEAH-box RNA helicase PRP16 [Rhizophagus irregula...   210   2e-58
dbj|GBC34568.1| pre-mRNA-splicing factor ATP-dependent RNA helic...   142   1e-34
gb|POG78319.1| hypothetical protein GLOIN_2v673660 [Rhizophagus ...    99   1e-21
gb|PKK80937.1| hypothetical protein RhiirC2_289120 [Rhizophagus ...    99   1e-21

>gb|EXX76145.1| DEAH-box RNA helicase PRP16 [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC34569.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16
           [Rhizophagus irregularis DAOM 181602]
          Length = 1322

 Score =  210 bits (535), Expect = 2e-58
 Identities = 126/247 (51%), Positives = 128/247 (51%)
 Frame = +1

Query: 1   DDNRHVFKAPAPRTSILGLXXXXXXXXXXXXXXXXXXXXXHPAKRINLGIASEWDEDSVN 180
           DDNRHVFKAPAPRTS+LGL                     HPAKRINLGIASEWDEDSVN
Sbjct: 123 DDNRHVFKAPAPRTSVLGLDKIAEEKKRAAANKASEDDDKHPAKRINLGIASEWDEDSVN 182

Query: 181 TTESVDDSKLRGSSSALKSNYRKRTDANSVLDEARNRLEEHKRERDQYIDXXXXXXXXXX 360
           TTESVDDSKLRGSSSALKSNYRKRTDANSVLDEARNRLEEHKRERDQY D          
Sbjct: 183 TTESVDDSKLRGSSSALKSNYRKRTDANSVLDEARNRLEEHKRERDQYTDNHHKKSHHKD 242

Query: 361 XXXXXXXXXXYGRHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
                     YGR+E                                             
Sbjct: 243 KSDRRDRDDDYGRYE---SSRSSRRSPSVSSSRNGSSPSVSSSRRSPSVVSSRSRRSPSV 299

Query: 541 XXXIRDGYSRRTPSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDTTPTTSTSRFSV 720
              IRDGYSRRTPSTT                             EWDTTPTTSTSRFSV
Sbjct: 300 ASSIRDGYSRRTPSTTSWREGSSKRSSSLSPWRDSDRSSSRISRSEWDTTPTTSTSRFSV 359

Query: 721 GGLTPRK 741
           GGLTPRK
Sbjct: 360 GGLTPRK 366


>dbj|GBC34568.1| pre-mRNA-splicing factor ATP-dependent RNA helicase [Rhizophagus
           irregularis DAOM 181602]
          Length = 1315

 Score =  142 bits (358), Expect = 1e-34
 Identities = 99/247 (40%), Positives = 106/247 (42%)
 Frame = +1

Query: 1   DDNRHVFKAPAPRTSILGLXXXXXXXXXXXXXXXXXXXXXHPAKRINLGIASEWDEDSVN 180
           DDNRHVFKAPAPRTS+LGL                     HPAKRINLGIASEWDEDSVN
Sbjct: 123 DDNRHVFKAPAPRTSVLGLDKIAEEKKRAAANKASEDDDKHPAKRINLGIASEWDEDSVN 182

Query: 181 TTESVDDSKLRGSSSALKSNYRKRTDANSVLDEARNRLEEHKRERDQYIDXXXXXXXXXX 360
           TTESVDDSKLRG  +   +    +T+   +L     R E    ERDQY D          
Sbjct: 183 TTESVDDSKLRGYGN--NTYTFTKTNQRILL-----RFEIKLSERDQYTDNHHKKSHHKD 235

Query: 361 XXXXXXXXXXYGRHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
                     YGR+E                                             
Sbjct: 236 KSDRRDRDDDYGRYE---SSRSSRRSPSVSSSRNGSSPSVSSSRRSPSVVSSRSRRSPSV 292

Query: 541 XXXIRDGYSRRTPSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWDTTPTTSTSRFSV 720
              IRDGYSRRTPSTT                             EWDTTPTTSTSRFSV
Sbjct: 293 ASSIRDGYSRRTPSTTSWREGSSKRSSSLSPWRDSDRSSSRISRSEWDTTPTTSTSRFSV 352

Query: 721 GGLTPRK 741
           GGLTPRK
Sbjct: 353 GGLTPRK 359


>gb|POG78319.1| hypothetical protein GLOIN_2v673660 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 205

 Score = 99.0 bits (245), Expect = 1e-21
 Identities = 50/72 (69%), Positives = 51/72 (70%)
 Frame = +1

Query: 1   DDNRHVFKAPAPRTSILGLXXXXXXXXXXXXXXXXXXXXXHPAKRINLGIASEWDEDSVN 180
           DDNRHVFKAPAPRTS+LGL                     HPAKRINLGIASEWDEDSVN
Sbjct: 123 DDNRHVFKAPAPRTSVLGLDKIAEEKKRAAANKASEDDDKHPAKRINLGIASEWDEDSVN 182

Query: 181 TTESVDDSKLRG 216
           TTESVDDSKLRG
Sbjct: 183 TTESVDDSKLRG 194


>gb|PKK80937.1| hypothetical protein RhiirC2_289120 [Rhizophagus irregularis]
          Length = 205

 Score = 99.0 bits (245), Expect = 1e-21
 Identities = 50/72 (69%), Positives = 51/72 (70%)
 Frame = +1

Query: 1   DDNRHVFKAPAPRTSILGLXXXXXXXXXXXXXXXXXXXXXHPAKRINLGIASEWDEDSVN 180
           DDNRHVFKAPAPRTS+LGL                     HPAKRINLGIASEWDEDSVN
Sbjct: 123 DDNRHVFKAPAPRTSVLGLDKIAEEKKRAAANKASEDDDKHPAKRINLGIASEWDEDSVN 182

Query: 181 TTESVDDSKLRG 216
           TTESVDDSKLRG
Sbjct: 183 TTESVDDSKLRG 194


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