BLASTX nr result

ID: Ophiopogon26_contig00049200 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00049200
         (373 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC07106.1| actin-like ATPase domain-containing protein, part...   146   2e-39
gb|EXX59690.1| actin [Rhizophagus irregularis DAOM 197198w] >gi|...   146   3e-39

>gb|PKC07106.1| actin-like ATPase domain-containing protein, partial [Rhizophagus
           irregularis]
 gb|PKC63717.1| actin-like ATPase domain-containing protein, partial [Rhizophagus
           irregularis]
 gb|PKK72342.1| actin-like ATPase domain-containing protein, partial [Rhizophagus
           irregularis]
 gb|PKY16406.1| actin-like ATPase domain-containing protein, partial [Rhizophagus
           irregularis]
 gb|POG77897.1| actin family, partial [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 469

 Score =  146 bits (369), Expect = 2e-39
 Identities = 74/78 (94%), Positives = 75/78 (96%), Gaps = 3/78 (3%)
 Frame = +1

Query: 148 APNRPTIDITTSTQPASQTPRSTTPNNPPARNASPVPQS---SNSIIPVTSTRRPSIYGT 318
           APNRPTIDITTSTQPASQTPRSTTPNNPPARNASPVPQS   SN+IIPVTSTRRPSIYGT
Sbjct: 10  APNRPTIDITTSTQPASQTPRSTTPNNPPARNASPVPQSSTTSNNIIPVTSTRRPSIYGT 69

Query: 319 GEDRIVLDIGSLYIKAGF 372
           GEDRIVLDIGSLYIKAGF
Sbjct: 70  GEDRIVLDIGSLYIKAGF 87


>gb|EXX59690.1| actin [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC46547.1| Actin-related protein 10 [Rhizophagus irregularis DAOM 181602]
          Length = 501

 Score =  146 bits (369), Expect = 3e-39
 Identities = 74/78 (94%), Positives = 75/78 (96%), Gaps = 3/78 (3%)
 Frame = +1

Query: 148 APNRPTIDITTSTQPASQTPRSTTPNNPPARNASPVPQS---SNSIIPVTSTRRPSIYGT 318
           APNRPTIDITTSTQPASQTPRSTTPNNPPARNASPVPQS   SN+IIPVTSTRRPSIYGT
Sbjct: 10  APNRPTIDITTSTQPASQTPRSTTPNNPPARNASPVPQSSTTSNNIIPVTSTRRPSIYGT 69

Query: 319 GEDRIVLDIGSLYIKAGF 372
           GEDRIVLDIGSLYIKAGF
Sbjct: 70  GEDRIVLDIGSLYIKAGF 87


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