BLASTX nr result

ID: Ophiopogon26_contig00047423 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00047423
         (562 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX50904.1| hypothetical protein RirG_266570 [Rhizophagus irr...   222   1e-67
gb|PKC13029.1| hypothetical protein RhiirA5_352166, partial [Rhi...    58   1e-07

>gb|EXX50904.1| hypothetical protein RirG_266570 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC27717.1| hypothetical protein RIR_1374500 [Rhizophagus irregularis DAOM
           181602]
 gb|POG70491.1| hypothetical protein GLOIN_2v1615340 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 445

 Score =  222 bits (565), Expect = 1e-67
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 9/191 (4%)
 Frame = -1

Query: 550 MNQVYNNPLIIRNVEFKEYLTEEEALNKINEFRFSDAGQALPDSKKNSLRRIANYFVTHP 371
           MNQVYNNPLIIRNV+FKE+LTEEEAL KINEFR SDAG+ALPD+KK SL+RIANYFVTHP
Sbjct: 1   MNQVYNNPLIIRNVKFKEHLTEEEALKKINEFRSSDAGKALPDNKKISLKRIANYFVTHP 60

Query: 370 NFSEVSDDHVLIREGYPVIFTSKNYRKIKYEKPVKKEGTDESSNRNNETLDIDNDGDGEI 191
           NF EVSDDHVLIREGYPVIFTSKNY+K+KYEK VK+E  D          +++NDGDG  
Sbjct: 61  NFDEVSDDHVLIREGYPVIFTSKNYKKLKYEKSVKREEID----------NMNNDGDGVN 110

Query: 190 RKSN---------ISRPKIKIRDVLKAKGIDYGPKTLAPDEDGNLKLVNVEKFKNKTTQE 38
              N         IS+ K +IRD+L +KGID  P+TL PD+DG ++L+ +       T+E
Sbjct: 111 ESINTLSKSDPLKISKQKPRIRDILISKGIDPKPQTLVPDKDGKMRLIEI-----AATRE 165

Query: 37  SSARKDNAKSN 5
           S   KDN K N
Sbjct: 166 SYVSKDNTKPN 176


>gb|PKC13029.1| hypothetical protein RhiirA5_352166, partial [Rhizophagus
           irregularis]
 gb|PKC76326.1| hypothetical protein RhiirA1_406462, partial [Rhizophagus
           irregularis]
 gb|PKY16755.1| hypothetical protein RhiirB3_403297, partial [Rhizophagus
           irregularis]
          Length = 119

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
 Frame = -1

Query: 217 IDNDGDGEIRKSN---------ISRPKIKIRDVLKAKGIDYGPKTLAPDEDGNLKLVNVE 65
           ++NDGDG     N         IS+ K +IRD+L +KGID  P+TL PD+DG ++L+ + 
Sbjct: 1   MNNDGDGVNESINTLSKSDPLKISKQKPRIRDILISKGIDPKPQTLVPDKDGKMRLIEI- 59

Query: 64  KFKNKTTQESSARKDNAKSN 5
                 T+ES   KDN K N
Sbjct: 60  ----AATRESYVSKDNTKPN 75


Top