BLASTX nr result

ID: Ophiopogon26_contig00047112 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00047112
         (375 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX79678.1| hypothetical protein RirG_003280 [Rhizophagus irr...   109   6e-29
gb|PKY51795.1| hypothetical protein RhiirA4_407741 [Rhizophagus ...   107   1e-27
gb|EXX75401.1| Spt15p [Rhizophagus irregularis DAOM 197198w] >gi...   109   6e-27
gb|EXX75402.1| Spt15p [Rhizophagus irregularis DAOM 197198w]           62   5e-09
dbj|GBC13509.1| TATA box binding transcription initiation factor...    60   3e-08

>gb|EXX79678.1| hypothetical protein RirG_003280 [Rhizophagus irregularis DAOM
           197198w]
          Length = 72

 Score =  109 bits (272), Expect = 6e-29
 Identities = 58/72 (80%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = -1

Query: 297 HQAILPNT-YSTPVSFVPHHQAPVAVPATPQHGGPLTFPGSNMMVDEQNSSVADQTNQSQ 121
           HQAILPNT YS P +FV  H  PVAVP TP   G LT+PGSNMMVDEQNSSVADQTNQSQ
Sbjct: 3   HQAILPNTQYSAPAAFVQVH--PVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 60

Query: 120 PQSVAGMVPTLQ 85
           PQSVAGMVPTLQ
Sbjct: 61  PQSVAGMVPTLQ 72


>gb|PKY51795.1| hypothetical protein RhiirA4_407741 [Rhizophagus irregularis]
          Length = 108

 Score =  107 bits (267), Expect = 1e-27
 Identities = 57/72 (79%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = -1

Query: 297 HQAILPNT-YSTPVSFVPHHQAPVAVPATPQHGGPLTFPGSNMMVDEQNSSVADQTNQSQ 121
           HQAILPN  YS P +FV  H  PVAVP TP   G LT+PGSNMMVDEQNSSVADQTNQSQ
Sbjct: 3   HQAILPNAQYSAPAAFVQVH--PVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 60

Query: 120 PQSVAGMVPTLQ 85
           PQSVAGMVPTLQ
Sbjct: 61  PQSVAGMVPTLQ 72


>gb|EXX75401.1| Spt15p [Rhizophagus irregularis DAOM 197198w]
 gb|EXX75405.1| Spt15p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC61356.1| TBP-domain-containing protein [Rhizophagus irregularis]
          Length = 244

 Score =  109 bits (272), Expect = 6e-27
 Identities = 58/72 (80%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = -1

Query: 297 HQAILPNT-YSTPVSFVPHHQAPVAVPATPQHGGPLTFPGSNMMVDEQNSSVADQTNQSQ 121
           HQAILPNT YS P +FV  H  PVAVP TP   G LT+PGSNMMVDEQNSSVADQTNQSQ
Sbjct: 3   HQAILPNTQYSAPAAFVQVH--PVAVPTTPIGNGALTYPGSNMMVDEQNSSVADQTNQSQ 60

Query: 120 PQSVAGMVPTLQ 85
           PQSVAGMVPTLQ
Sbjct: 61  PQSVAGMVPTLQ 72


>gb|EXX75402.1| Spt15p [Rhizophagus irregularis DAOM 197198w]
          Length = 191

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -1

Query: 174 MMVDEQNSSVADQTNQSQPQSVAGMVPTLQ 85
           MMVDEQNSSVADQTNQSQPQSVAGMVPTLQ
Sbjct: 1   MMVDEQNSSVADQTNQSQPQSVAGMVPTLQ 30


>dbj|GBC13509.1| TATA box binding transcription initiation factor TFIID-1
           [Rhizophagus irregularis DAOM 181602]
 gb|PKC04218.1| TATA-box binding protein [Rhizophagus irregularis]
 gb|PKK79642.1| TATA-box binding protein [Rhizophagus irregularis]
 gb|POG68927.1| TATA-box binding protein [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 201

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -1

Query: 171 MVDEQNSSVADQTNQSQPQSVAGMVPTLQ 85
           MVDEQNSSVADQTNQSQPQSVAGMVPTLQ
Sbjct: 1   MVDEQNSSVADQTNQSQPQSVAGMVPTLQ 29


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